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PDB: 46 件

1QM8
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Structure of Bacteriorhodopsin at 100 K
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, 3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL, ...
著者Takeda, K, Matsui, Y, Sato, H, Hino, T, Kanamori, E, Okumura, H, Yamane, T, Kamiya, N, Kouyama, T.
登録日1999-09-22
公開日2000-08-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A Novel Three-Dimensional Crystal of Bacteriorhodopsin Obtained by Successive Fusion of the Vesicular Assemblies.
J.Mol.Biol., 283, 1998
1BM1
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CRYSTAL STRUCTURE OF BACTERIORHODOPSIN IN THE LIGHT-ADAPTED STATE
分子名称: BACTERIORHODOPSIN, PHOSPHORIC ACID 2,3-BIS-(3,7,11,15-TETRAMETHYL-HEXADECYLOXY)-PROPYL ESTER 2-HYDROXO-3-PHOSPHONOOXY-PROPYL ESTER, RETINAL
著者Sato, H, Takeda, K, Tani, K, Hino, T, Okada, T, Nakasako, M, Kamiya, N, Kouyama, T.
登録日1998-07-28
公開日1999-04-27
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Specific lipid-protein interactions in a novel honeycomb lattice structure of bacteriorhodopsin.
Acta Crystallogr.,Sect.D, 55, 1999
1DZE
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Structure of the M Intermediate of Bacteriorhodopsin trapped at 100K
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, 3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL, ...
著者Takeda, K, Matsui, Y, Sato, H, Hino, T, Kanamori, E, Okumura, H, Yamane, T, Iizuka, T, Kamiya, N, Adachi, S, Kouyama, T.
登録日2000-02-25
公開日2000-08-16
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of the M Intermediate of Bacteriorhodopsin: Allosteric Structural Changes Mediated by Sliding Movement of a Transmembrane Helix
J.Mol.Biol., 341, 2004
4WW3
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BU of 4ww3 by Molmil
Crystal structure of the lumi intermediate of squid rhodopsin
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, DOCOSANE, PALMITIC ACID, ...
著者Murakami, M, Kouyama, T.
登録日2014-11-10
公開日2015-06-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystallographic Study of the LUMI Intermediate of Squid Rhodopsin
Plos One, 10, 2015
1IW9
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Crystal Structure of the M Intermediate of Bacteriorhodopsin
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, RETINAL, ...
著者Takeda, K, Matsui, Y, Kamiya, N, Adachi, S, Okumura, H, Kouyama, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-04-25
公開日2003-12-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the M intermediate of bacteriorhodopsin: allosteric structural changes mediated by sliding movement of a transmembrane helix
J.Mol.Biol., 341, 2004
1X0S
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Crystal structure of the 13-cis isomer of bacteriorhodopsin
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
著者Nishikawa, T, Murakami, M, Kouyama, T.
登録日2005-03-28
公開日2005-08-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the 13-cis isomer of bacteriorhodopsin in the dark-adapted state.
J.Mol.Biol., 352, 2005
1X0K
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Crystal Structure of Bacteriorhodopsin at pH 10
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
著者Okumura, H, Murakami, M, Kouyama, T.
登録日2005-03-23
公開日2005-08-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin
J.Mol.Biol., 351, 2005
2DQL
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Crystal structure of the circadian clock associated protein Pex from anabaena
分子名称: PHOSPHATE ION, Pex protein
著者Kurosawa, S, Kouyama, T.
登録日2006-05-29
公開日2007-05-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Functionally important structural elements of the cyanobacterial clock-related protein Pex.
Genes Cells, 14, 2009
1X0I
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Crystal Structure of the Acid Blue Form of Bacteriorhodopsin
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
著者Okumura, H, Murakami, M, Kouyama, T.
登録日2005-03-23
公開日2005-08-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin
J.Mol.Biol., 351, 2005
1IXE
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Crystal structure of citrate synthase from Thermus thermophilus HB8
分子名称: CITRIC ACID, COENZYME A, GLYCEROL, ...
著者Murakami, M, Kanamori, E, Kawaguchi, S, Kuramitsu, S, Kouyama, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-06-20
公開日2003-07-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural comparison between the open and closed forms of citrate synthase from Thermus thermophilus HB8.
Biophys Physicobio., 12, 2015
1VGO
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BU of 1vgo by Molmil
Crystal Structure of Archaerhodopsin-2
分子名称: Archaerhodopsin 2, RETINAL, SULFATE ION, ...
著者Yoshimura, K, Enami, N, Murakami, M, Okumura, H, Ihara, K, Kouyama, T.
登録日2004-04-28
公開日2005-10-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of archaerhodopsin-1 and -2: Common structural motif in archaeal light-driven proton pumps
J.Mol.Biol., 358, 2006
1UAZ
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BU of 1uaz by Molmil
Crystal structure of archaerhodopsin-1
分子名称: RETINAL, archaerhodopsin-1
著者Enami, N, Okumua, H, Kouyama, T.
登録日2003-03-26
公開日2003-04-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献X-ray crystallographic studies of archaerhodopsin
J.Photosci., 9, 2003
1VGP
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BU of 1vgp by Molmil
Crystal Structure of an Isozyme of Citrate Synthase from Sulfolbus tokodaii strain7
分子名称: 373aa long hypothetical citrate synthase
著者Murakami, M, Ihara, K, Kouyama, T.
登録日2004-04-28
公開日2005-06-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structures of Two Isozymes of Citrate Synthase from Sulfolobus tokodaii Strain 7.
Biochem Res Int, 2016, 2016
1VGM
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Crystal Structure of an Isozyme of Citrate Synthase from Sulfolbus tokodaii strain7
分子名称: 378aa long hypothetical citrate synthase, GLYCEROL, SULFATE ION
著者Murakami, M, Ihara, K, Kouyama, T.
登録日2004-04-27
公開日2005-06-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of Two Isozymes of Citrate Synthase from Sulfolobus tokodaii Strain 7.
Biochem Res Int, 2016, 2016
1IXF
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Crystal Structure of the K intermediate of bacteriorhodopsin
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, RETINAL, ...
著者Matsui, Y, Sakai, K, Murakami, M, Shiro, Y, Adachi, S, Okumura, H, Kouyama, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-06-20
公開日2002-12-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Specific Damage Induced by X-ray Radiation and Structural Changes in the Primary Photoreaction of Bacteriorhodopsin
J.MOL.BIOL., 324, 2002
1IOM
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BU of 1iom by Molmil
CRYSTAL STRUCTURE OF CITRATE SYNTHASE FROM THERMUS THERMOPHILUS HB8
分子名称: CARBONATE ION, CITRATE SYNTHASE, GLYCEROL, ...
著者Kanamori, E, Kouyama, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-03-19
公開日2003-07-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural comparison between the open and closed forms of citrate synthase from Thermus thermophilus HB8.
Biophys Physicobio., 12, 2015
2DHT
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BU of 2dht by Molmil
Crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii strain7
分子名称: 409aa long hypothetical NADP-dependent isocitrate dehydrogenase
著者Kondo, H, Murakami, M, Ihara, K, Suzuki, S, Kouyama, T.
登録日2006-03-25
公開日2007-03-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of isocitrate dehydrogenase of Sulfolobus tokodaii strain7
To be Published
2ZZL
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Structure of bacteriorhodopsin's M intermediate at pH 7
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, ...
著者Yamamoto, M, Kouyama, T.
登録日2009-02-18
公開日2009-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal Structures of Different Substates of Bacteriorhodopsin's M Intermediate at Various pH Levels.
J.Mol.Biol., 2009
2Z73
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Crystal structure of squid rhodopsin
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, DOCOSANE, PALMITIC ACID, ...
著者Murakami, M, Kouyama, T.
登録日2007-08-13
公開日2008-05-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of squid rhodopsin.
Nature, 453, 2008
3AYM
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Crystal structure of the batho intermediate of squid rhodopsin
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, PALMITIC ACID, RETINAL, ...
著者Murakami, M, Kouyama, T.
登録日2011-05-09
公開日2011-08-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystallographic Analysis of the Primary Photochemical Reaction of Squid Rhodopsin
J.Mol.Biol., 413, 2011
3AYN
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Crystal structure of squid isorhodopsin
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, PALMITIC ACID, RETINAL, ...
著者Murakami, M, Kouyama, T.
登録日2011-05-09
公開日2011-08-17
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystallographic Analysis of the Primary Photochemical Reaction of Squid Rhodopsin
J.Mol.Biol., 413, 2011
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