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PDB: 71 件
5J90
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BU of 5j90 by Molmil
Structure of Fjoh_4558, a chitin-binding SusD homolog from Flavobacterium johnsoniae
分子名称: 1,2-ETHANEDIOL, RagB/SusD domain protein
著者Koropatkin, N.M.
登録日2016-04-08
公開日2017-02-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.3932 Å)
主引用文献A polysaccharide utilization locus from Flavobacterium johnsoniae enables conversion of recalcitrant chitin.
Biotechnol Biofuels, 9, 2016
3K8L
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BU of 3k8l by Molmil
Crystal structure of SusG-D498N mutant with maltoheptaose
分子名称: 1,2-ETHANEDIOL, Alpha-amylase, susG, ...
著者Koropatkin, N.M, Smith, T.J.
登録日2009-10-14
公開日2010-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献SusG: A Unique Cell-Membrane-Associated alpha-Amylase from a Prominent Human Gut Symbiont Targets Complex Starch Molecules.
Structure, 18, 2010
3K8M
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BU of 3k8m by Molmil
Crystal structure of SusG with acarbose
分子名称: 1,2-ETHANEDIOL, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Koropatkin, N.M, Smith, T.J.
登録日2009-10-14
公開日2010-03-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献SusG: A Unique Cell-Membrane-Associated alpha-Amylase from a Prominent Human Gut Symbiont Targets Complex Starch Molecules.
Structure, 18, 2010
3K8K
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BU of 3k8k by Molmil
Crystal structure of SusG
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Alpha-amylase, ...
著者Koropatkin, N.M, Smith, T.J.
登録日2009-10-14
公開日2010-03-02
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献SusG: A Unique Cell-Membrane-Associated alpha-Amylase from a Prominent Human Gut Symbiont Targets Complex Starch Molecules.
Structure, 18, 2010
5CK1
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BU of 5ck1 by Molmil
selenomethionine BT4246
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, SusD homolog
著者Koropatkin, N.M.
登録日2015-07-15
公開日2016-10-12
実験手法X-RAY DIFFRACTION (1.835 Å)
主引用文献Mechanistic insight into mucin degradation by the human gut microbiota reveals targeting of the glycoprotein core
to be published
5CK0
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BU of 5ck0 by Molmil
BT4246
分子名称: NICKEL (II) ION, POTASSIUM ION, SusD homolog
著者Koropatkin, N.M.
登録日2015-07-15
公開日2016-10-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献Mechanistic insight into mucin degradation by the human gut microbiota reveals targeting of the glycoprotein core
to be published
5CJZ
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BU of 5cjz by Molmil
BT4246 with galactose
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CESIUM ION, ...
著者Koropatkin, N.M.
登録日2015-07-15
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Mechanistic insight into mucin degradation by the human gut microbiota reveals targeting of the glycoprotein core
to be published
6MLY
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BU of 6mly by Molmil
Bifunctional GH43-CE Bacteroides eggerthii, BACEGG_01304
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Bifunctional GH43-CE protein, ...
著者Koropatkin, N.M, Pereira, G.V, Cann, I.
登録日2018-09-28
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Degradation of complex arabinoxylans by human colonic Bacteroidetes
Nat Commun, 2021
6MOU
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BU of 6mou by Molmil
Bacteroides intestinalis feruloyl esterase, Bacint_01033
分子名称: 1,2-ETHANEDIOL, Isoamylase N-terminal domain protein
著者Koropatkin, N.M, Pereira, G.V, Cann, I.
登録日2018-10-04
公開日2019-10-16
最終更新日2021-01-27
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Degradation of complex arabinoxylans by human colonic Bacteroidetes
Nat Commun, 2021
6BS6
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BU of 6bs6 by Molmil
SusG with mixed linkage amylosaccharide
分子名称: ACETATE ION, Alpha-amylase SusG, CALCIUM ION, ...
著者Koropatkin, N.M, Cockburn, D.W.
登録日2017-12-01
公開日2018-01-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structural basis for the flexible recognition of alpha-glucan substrates by Bacteroides thetaiotaomicron SusG.
Protein Sci., 27, 2018
6NE9
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BU of 6ne9 by Molmil
Bacteroides intestinalis acetyl xylan esterase (BACINT_01039)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Koropatkin, N.M, Pereira, G.V, Cann, I.
登録日2018-12-17
公開日2019-12-25
最終更新日2021-01-27
実験手法X-RAY DIFFRACTION (1.738 Å)
主引用文献Degradation of complex arabinoxylans by human colonic Bacteroidetes
Nat Commun, 2021
6MOT
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BU of 6mot by Molmil
Bacteroides intestinalis feruloyl esterase, Bacint_01033
分子名称: 1,2-ETHANEDIOL, Isoamylase N-terminal domain protein
著者Koropatkin, N.M, Pereira, G.V, Cann, I.
登録日2018-10-04
公開日2019-10-16
最終更新日2021-01-27
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Degradation of complex arabinoxylans by human colonic Bacteroidetes
Nat Commun, 2021
2I4C
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BU of 2i4c by Molmil
Crystal structure of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 in complex with bicarbonate and calcium
分子名称: BICARBONATE ION, Bicarbonate transporter, CALCIUM ION
著者Koropatkin, N.M, Smith, T.J, Pakrasi, H.B.
登録日2006-08-21
公開日2006-12-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
2I49
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BU of 2i49 by Molmil
Crystal structure of apo form of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803
分子名称: Bicarbonate transporter
著者Koropatkin, N.M, Smith, T.J, Pakrasi, H.B.
登録日2006-08-21
公開日2006-12-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
2I48
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BU of 2i48 by Molmil
Crystal structure of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 in complex with carbonic acid
分子名称: Bicarbonate transporter, CARBONATE ION
著者Koropatkin, N.M, Smith, T.J, Pakrasi, H.B.
登録日2006-08-21
公開日2006-12-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
2I4B
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BU of 2i4b by Molmil
Crystal structure of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 in complex with bicarbonate and calcium
分子名称: BICARBONATE ION, Bicarbonate transporter, CALCIUM ION
著者Koropatkin, N.M, Smith, T.J, Pakrasi, H.B.
登録日2006-08-21
公開日2006-12-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
3EHM
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BU of 3ehm by Molmil
Structure of BT1043
分子名称: 1,2-ETHANEDIOL, SusD homolog
著者Koropatkin, N.M, Smith, T.J.
登録日2008-09-13
公開日2009-05-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a SusD homologue, BT1043, involved in mucin O-glycan utilization in a prominent human gut symbiont.
Biochemistry, 48, 2009
7JJN
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BU of 7jjn by Molmil
Eubacterium rectale Amy13B (EUR_01860)
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
著者Koropatkin, N.M, Cockburn, D.W, Cerqueira, F.M.
登録日2020-07-27
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The structures of the GH13_36 amylases from Eubacterium rectale and Ruminococcus bromii reveal subsite architectures that favor maltose production
Amylase, 4, 2020
7LSA
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BU of 7lsa by Molmil
Ruminococcus bromii Amy12 with maltoheptaose
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Koropatkin, N.M, Cockburn, D.W, Brown, H.A, Kibler, R.D.
登録日2021-02-18
公開日2021-07-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structure and substrate recognition by the Ruminococcus bromii amylosome pullulanases.
J.Struct.Biol., 213, 2021
7LST
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BU of 7lst by Molmil
Ruminococcus bromii Amy12-D392A with 63-a-D-glucosyl-maltotriosyl-maltotriose
分子名称: ACETATE ION, CALCIUM ION, GLYCEROL, ...
著者Koropatkin, N.M, Cockburn, D.W, Brown, H.A, Kibler, R.D.
登録日2021-02-18
公開日2021-07-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure and substrate recognition by the Ruminococcus bromii amylosome pullulanases.
J.Struct.Biol., 213, 2021
7LSU
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BU of 7lsu by Molmil
Ruminococcus bromii Amy12-D392A with 63-a-D-glucosyl-maltotriose
分子名称: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Koropatkin, N.M, Cockburn, D.W, Brown, H.A, Kibler, R.D.
登録日2021-02-18
公開日2021-07-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure and substrate recognition by the Ruminococcus bromii amylosome pullulanases.
J.Struct.Biol., 213, 2021
7LSR
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BU of 7lsr by Molmil
Ruminococcus bromii Amy12-D392A with maltoheptaose
分子名称: CALCIUM ION, GLYCEROL, Pullulanase, ...
著者Koropatkin, N.M, Cockburn, D.W, Brown, H.A, Kibler, R.D.
登録日2021-02-18
公開日2021-07-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Structure and substrate recognition by the Ruminococcus bromii amylosome pullulanases.
J.Struct.Biol., 213, 2021
3CK9
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BU of 3ck9 by Molmil
B. thetaiotaomicron SusD with maltoheptaose
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, SusD, ...
著者Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
登録日2008-03-14
公開日2008-05-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3F11
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BU of 3f11 by Molmil
Structure of futa1 with iron(III)
分子名称: 1,2-ETHANEDIOL, FE (III) ION, Iron transport protein, ...
著者Koropatkin, N.M, Randich, A.M, Bhattachryya-Pakrasi, M, Pakrasi, H.B, Smith, T.J.
登録日2008-10-27
公開日2008-11-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structure of the iron-binding protein, FutA1, from Synechocystis 6803
J.Biol.Chem., 282, 2007
3CK7
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BU of 3ck7 by Molmil
B. thetaiotaomicron SusD with alpha-cyclodextrin
分子名称: CALCIUM ION, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), SusD
著者Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
登録日2008-03-14
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008

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