1OWO
 
 | | DATA4:photoreduced DNA photolyase / received X-rays dose 1.2 exp15 photons/mm2 | | 分子名称: | Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION | | 著者 | Komori, H, Adachi, S, Miki, K, Eker, A, Kort, R. | | 登録日 | 2003-03-28 | | 公開日 | 2004-04-13 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
Acta Crystallogr.,Sect.D, 60, 2004
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1OWP
 | | DATA6:photoreduced DNA pholyase / received X-rays dose 4.8 exp15 photons/mm2 | | 分子名称: | Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION | | 著者 | Komori, H, Adachi, S, Miki, K, Eker, A, Kort, R. | | 登録日 | 2003-03-28 | | 公開日 | 2004-04-13 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
Acta Crystallogr.,Sect.D, 60, 2004
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1IQU
 | | Crystal structure of photolyase-thymine complex | | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, THYMINE, ... | | 著者 | Komori, H, Masui, R, Kuramitsu, S, Yokoyama, S, Shibata, T, Inoue, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2001-08-03 | | 公開日 | 2002-05-08 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
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1IQR
 | | Crystal structure of DNA photolyase from Thermus thermophilus | | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, photolyase | | 著者 | Komori, H, Masui, R, Kuramitsu, S, Yokoyama, S, Shibata, T, Inoue, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2001-07-27 | | 公開日 | 2001-11-28 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
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3UAA
 | | Multicopper Oxidase CueO mutant C500SE506Q (data1) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2011-10-21 | | 公開日 | 2012-04-11 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
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3UAD
 | | Multicopper Oxidase CueO mutant C500SE506Q (data5) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2011-10-21 | | 公開日 | 2012-04-11 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.1 Å) | | 主引用文献 | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
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3UAE
 | | Multicopper Oxidase CueO mutant C500SE506Q (data6) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2011-10-21 | | 公開日 | 2012-04-11 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
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3UAB
 | | Multicopper Oxidase CueO mutant C500SE506Q (data2) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2011-10-21 | | 公開日 | 2012-04-11 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
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2ZWN
 | | Crystal structure of the novel two-domain type laccase from a metagenome | | 分子名称: | CHLORIDE ION, COPPER (II) ION, CU-O-CU LINKAGE, ... | | 著者 | Komori, H, Miyazaki, K, Higuchi, Y. | | 登録日 | 2008-12-17 | | 公開日 | 2009-04-07 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | X-ray structure of a two-domain type laccase: a missing link in the evolution of multi-copper proteins
Febs Lett., 583, 2009
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2EWI
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4ZID
 | | Dimeric Hydrogenobacter thermophilus cytochrome c552 obtained from Escherichia coli | | 分子名称: | Cytochrome c-552, HEME C | | 著者 | Hayashi, Y, Yamanaka, M, Nagao, S, Komori, H, Higuchi, Y, Hirota, S. | | 登録日 | 2015-04-28 | | 公開日 | 2016-02-10 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Domain swapping oligomerization of thermostable c-type cytochrome in E. coli cells
Sci Rep, 6, 2016
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2FFN
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2DT5
 | | Crystal Structure of TTHA1657 (AT-rich DNA-binding protein) from Thermus thermophilus HB8 | | 分子名称: | AT-rich DNA-binding protein, CHLORIDE ION, GLYCEROL, ... | | 著者 | Nakamura, A, Sosa, A, Komori, H, Kita, A, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2006-07-11 | | 公開日 | 2007-01-02 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (2.16 Å) | | 主引用文献 | Crystal structure of TTHA1657 (AT-rich DNA-binding protein; p25) from Thermus thermophilus HB8 at 2.16 A resolution
Proteins, 66, 2007
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2EWK
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7V5Q
 | | The dimeric structure of G80A/H81A/L137E myoglobin | | 分子名称: | Myoglobin, PROTOPORPHYRIN IX CONTAINING FE | | 著者 | Xie, C, Komori, H, Hirota, S. | | 登録日 | 2021-08-17 | | 公開日 | 2022-06-29 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (1.38 Å) | | 主引用文献 | Experimental and theoretical study on converting myoglobin into a stable domain-swapped dimer by utilizing a tight hydrogen bond network at the hinge region.
Rsc Adv, 11, 2021
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7V5R
 | | The dimeric structure of G80A/H81A/L137D myoglobin | | 分子名称: | Myoglobin, PROTOPORPHYRIN IX CONTAINING FE | | 著者 | Xie, C, Komori, H, Hirota, S. | | 登録日 | 2021-08-17 | | 公開日 | 2022-06-29 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (1.39 Å) | | 主引用文献 | Experimental and theoretical study on converting myoglobin into a stable domain-swapped dimer by utilizing a tight hydrogen bond network at the hinge region.
Rsc Adv, 11, 2021
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3NBT
 | | Crystal structure of trimeric cytochrome c from horse heart | | 分子名称: | Cytochrome c, DI(HYDROXYETHYL)ETHER, HEME C, ... | | 著者 | Taketa, M, Komori, H, Hirota, S, Higuchi, Y. | | 登録日 | 2010-06-04 | | 公開日 | 2010-07-14 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Cytochrome c polymerization by successive domain swapping at the C-terminal helix
Proc.Natl.Acad.Sci.USA, 107, 2010
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3NBS
 | | Crystal structure of dimeric cytochrome c from horse heart | | 分子名称: | Cytochrome c, DI(HYDROXYETHYL)ETHER, HEME C, ... | | 著者 | Taketa, M, Komori, H, Hirota, S, Higuchi, Y. | | 登録日 | 2010-06-04 | | 公開日 | 2010-07-14 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Cytochrome c polymerization by successive domain swapping at the C-terminal helix
Proc.Natl.Acad.Sci.USA, 107, 2010
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5AUR
 | | Hydrogenobacter thermophilus cytochrome c552 dimer formed by domain swapping at N-terminal region | | 分子名称: | Cytochrome c-552, HEME C, IODIDE ION | | 著者 | Ren, C, Nagao, S, Yamanaka, M, Kamikubo, H, Komori, H, Shomura, Y, Higuchi, Y, Hirota, S. | | 登録日 | 2015-06-08 | | 公開日 | 2015-10-21 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.26 Å) | | 主引用文献 | Oligomerization enhancement and two domain swapping mode detection for thermostable cytochrome c552via the elongation of the major hinge loop.
Mol Biosyst, 11, 2015
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2EWU
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1WUJ
 | | Three-Dimensional Structure Of The Ni-B State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F | | 分子名称: | FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, MAGNESIUM ION, ... | | 著者 | Ogata, H, Hirota, S, Nakahara, A, Komori, H, Shibata, N, Kato, T, Kano, K, Higuchi, Y. | | 登録日 | 2004-12-07 | | 公開日 | 2005-12-07 | | 最終更新日 | 2019-09-04 | | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | | 主引用文献 | Activation process of [NiFe] hydrogenase elucidated by high-resolution X-Ray analyses: conversion of the ready to the unready state
Structure, 13, 2005
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1WUH
 | | Three-Dimensional Structure Of The Ni-A State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ... | | 著者 | Ogata, H, Hirota, S, Nakahara, A, Komori, H, Shibata, N, Kato, T, Kano, K, Higuchi, Y. | | 登録日 | 2004-12-07 | | 公開日 | 2005-12-07 | | 最終更新日 | 2019-09-04 | | 実験手法 | X-RAY DIFFRACTION (1.24 Å) | | 主引用文献 | Structural basis for the activation process of [NiFe] hydrogenase from D.vulgaris Miyazaki F
To be Published
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1WUK
 | | High resolution Structure Of The Oxidized State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F | | 分子名称: | (4R)-2-METHYLPENTANE-2,4-DIOL, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ... | | 著者 | Ogata, H, Hirota, S, Nakahara, A, Komori, H, Shibata, N, Kato, T, Kano, K, Higuchi, Y. | | 登録日 | 2004-12-07 | | 公開日 | 2005-12-07 | | 最終更新日 | 2019-09-04 | | 実験手法 | X-RAY DIFFRACTION (1.1 Å) | | 主引用文献 | Activation process of [NiFe] hydrogenase elucidated by high-resolution X-Ray analyses: conversion of the ready to the unready state
Structure, 13, 2005
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1WUL
 | | High Resolution Structure Of The Reduced State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F | | 分子名称: | (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, FE3-S4 CLUSTER, ... | | 著者 | Ogata, H, Hirota, S, Nakahara, A, Komori, H, Shibata, N, Kato, T, Kano, K, Higuchi, Y. | | 登録日 | 2004-12-07 | | 公開日 | 2005-12-07 | | 最終更新日 | 2019-09-04 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Activation process of [NiFe] hydrogenase elucidated by high-resolution X-Ray analyses: conversion of the ready to the unready state
Structure, 13, 2005
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1WUI
 | | Ultra-High resolution Structure Of The Ni-A State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F | | 分子名称: | (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, FE3-S4 CLUSTER, ... | | 著者 | Ogata, H, Hirota, S, Nakahara, A, Komori, H, Shibata, N, Kato, T, Kano, K, Higuchi, Y. | | 登録日 | 2004-12-07 | | 公開日 | 2005-12-07 | | 最終更新日 | 2019-09-04 | | 実験手法 | X-RAY DIFFRACTION (1.04 Å) | | 主引用文献 | Activation process of [NiFe] hydrogenase elucidated by high-resolution X-Ray analyses: conversion of the ready to the unready state
Structure, 13, 2005
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