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PDB: 30 件
8OFB
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Crystal Structure of T. maritima reverse gyrase with a minimal latch, hexagonal form
分子名称: CHLORIDE ION, HEXAETHYLENE GLYCOL, Reverse gyrase, ...
著者Klostermeier, D, Rasche, R, Mhaindarkar, V, Kummel, D, Rudolph, M.G.
登録日2023-03-15
公開日2023-04-26
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structure of reverse gyrase with a minimal latch that supports ATP-dependent positive supercoiling without specific interactions with the topoisomerase domain.
Acta Crystallogr D Struct Biol, 79, 2023
3EAQ
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Novel dimerization motif in the DEAD box RNA helicase Hera form 2, complete dimer, symmetric
分子名称: CHLORIDE ION, Heat resistant RNA dependent ATPase
著者Klostermeier, D, Rudolph, M.G.
登録日2008-08-26
公開日2008-12-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A novel dimerization motif in the C-terminal domain of the Thermus thermophilus DEAD box helicase Hera confers substantial flexibility.
Nucleic Acids Res., 37, 2009
3EAR
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Novel dimerization motif in the DEAD box RNA helicase Hera: form 1, partial dimer
分子名称: Hera
著者Klostermeier, D, Rudolph, M.G.
登録日2008-08-26
公開日2008-12-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A novel dimerization motif in the C-terminal domain of the Thermus thermophilus DEAD box helicase Hera confers substantial flexibility.
Nucleic Acids Res., 37, 2009
3EAS
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Novel dimerization motif in the DEAD box RNA helicase Hera: form 1, complete dimer, asymmetric
分子名称: Hera
著者Klostermeier, D, Rudolph, M.G.
登録日2008-08-26
公開日2008-12-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A novel dimerization motif in the C-terminal domain of the Thermus thermophilus DEAD box helicase Hera confers substantial flexibility.
Nucleic Acids Res., 37, 2009
5MAO
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HERA HELICASE RNA BINDING DOMAIN with TNCS in P212121
分子名称: Heat resistant RNA dependent ATPase, SULFATE ION
著者Rudolph, M.G, Klostermeier, D.
登録日2016-11-03
公開日2016-12-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal Structure of HERA CTD
To be published
7FSE
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Crystal Structure of T. maritima reverse gyrase with a minimal latch
分子名称: CHLORIDE ION, DODECAETHYLENE GLYCOL, Reverse gyrase, ...
著者Rasche, R, Kummel, D, Rudolph, M.G, Klostermeier, D.
登録日2023-01-04
公開日2023-05-10
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Structure of reverse gyrase with a minimal latch that supports ATP-dependent positive supercoiling without specific interactions with the topoisomerase domain.
Acta Crystallogr D Struct Biol, 79, 2023
7FSF
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CRYSTAL STRUCTURE OF T. MARITIMA REVERSE GYRASE ACTIVE SITE VARIANT Y851F
分子名称: Reverse gyrase, ZINC ION
著者Rasche, R, Kummel, D, Rudolph, M.G, Klostermeier, D.
登録日2023-01-04
公開日2023-05-10
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structure of reverse gyrase with a minimal latch that supports ATP-dependent positive supercoiling without specific interactions with the topoisomerase domain.
Acta Crystallogr D Struct Biol, 79, 2023
3I32
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Dimeric structure of a Hera helicase fragment including the C-terminal RecA domain, the dimerization domain, and the RNA binding domain
分子名称: BROMIDE ION, Heat resistant RNA dependent ATPase
著者Rudolph, M.G, Klostermeier, D.
登録日2009-06-30
公開日2009-09-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Thermus thermophilus DEAD box helicase Hera contains a modified RNA recognition motif domain loosely connected to the helicase core.
Rna, 15, 2009
3I31
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Hera helicase RNA binding domain is an RRM fold
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Heat resistant RNA dependent ATPase, SODIUM ION, ...
著者Rudolph, M.G, Klostermeier, D.
登録日2009-06-30
公開日2009-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Thermus thermophilus DEAD box helicase Hera contains a modified RNA recognition motif domain loosely connected to the helicase core.
Rna, 15, 2009
4KBG
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almost closed conformation of the helicase core of the RNA helicase Hera
分子名称: Heat resistant RNA dependent ATPase, SULFATE ION
著者Rudolph, M.G, Klostermeier, D.
登録日2013-04-23
公開日2013-07-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Rearranging RNA structures at 75C? toward the molecular mechanism and physiological function of the thermus thermophilus DEAD-box helicase hera.
Biopolymers, 99, 2013
4KBF
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two different open conformations of the helicase core of the RNA helicase Hera
分子名称: ADENOSINE MONOPHOSPHATE, Heat resistant RNA dependent ATPase, SODIUM ION, ...
著者Rudolph, M.G, Klostermeier, D.
登録日2013-04-23
公開日2013-07-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Rearranging RNA structures at 75C? toward the molecular mechanism and physiological function of the thermus thermophilus DEAD-box helicase hera.
Biopolymers, 99, 2013
2GXQ
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HERA N-terminal domain in complex with AMP, crystal form 1
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE MONOPHOSPHATE, heat resistant RNA dependent ATPase
著者Rudolph, M.G, Klostermeier, D.
登録日2006-05-09
公開日2006-08-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain.
J.Mol.Biol., 351, 2006
2GXS
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HERA N-terminal domain in complex with AMP, crystal form 2
分子名称: ADENOSINE MONOPHOSPHATE, CALCIUM ION, GLYCEROL, ...
著者Rudolph, M.G, Klostermeier, D.
登録日2006-05-09
公開日2006-08-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain.
J.Mol.Biol., 351, 2006
2GXU
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HERA N-terminal domain in complex with orthophosphate, crystal form 1
分子名称: PHOSPHATE ION, heat resistant RNA dependent ATPase
著者Rudolph, M.G, Klostermeier, D.
登録日2006-05-09
公開日2006-08-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain.
J.Mol.Biol., 351, 2006
3P4X
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BU of 3p4x by Molmil
Helicase domain of reverse gyrase from Thermotoga maritima
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Rudolph, M.G, Klostermeier, D.
登録日2010-10-07
公開日2011-06-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献The Conformational Flexibility of the Helicase-like Domain from Thermotoga maritima Reverse Gyrase Is Restricted by the Topoisomerase Domain.
Biochemistry, 50, 2011
3OIY
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BU of 3oiy by Molmil
Helicase domain of reverse gyrase from Thermotoga maritima
分子名称: CHLORIDE ION, PYROPHOSPHATE 2-, reverse gyrase helicase domain
著者Rudolph, M.G, Klostermeier, D.
登録日2010-08-20
公開日2010-12-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The latch modulates nucleotide and DNA binding to the helicase-like domain of Thermotoga maritima reverse gyrase and is required for positive DNA supercoiling.
Nucleic Acids Res., 39, 2011
3P4Y
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Helicase domain of reverse gyrase from Thermotoga maritima - P2 form
分子名称: reverse gyrase helicase domain
著者Rudolph, M.G, Klostermeier, D.
登録日2010-10-07
公開日2011-06-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The Conformational Flexibility of the Helicase-like Domain from Thermotoga maritima Reverse Gyrase Is Restricted by the Topoisomerase Domain.
Biochemistry, 50, 2011
4DDV
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Thermotoga maritima reverse gyrase, triclinic form
分子名称: Reverse gyrase, ZINC ION
著者Rudolph, M.G, Klostermeier, D.
登録日2012-01-19
公開日2012-12-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献Crystal structures of Thermotoga maritima reverse gyrase: inferences for the mechanism of positive DNA supercoiling.
Nucleic Acids Res., 41, 2013
3MWL
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BU of 3mwl by Molmil
Q28E mutant of HERA N-terminal RecA-like domain in complex with 8-OXOADENOSINE
分子名称: 6-azanyl-9-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-7H-purin-8-one, Heat resistant RNA dependent ATPase, SULFATE ION
著者Rudolph, M.G, Klostermeier, D.
登録日2010-05-06
公開日2011-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop.
Biol.Chem., 392, 2011
3MWJ
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Q28E mutant of HERA N-terminal RecA-like domain, apo form
分子名称: Heat resistant RNA dependent ATPase, SULFATE ION
著者Rudolph, M.G, Klostermeier, D.
登録日2010-05-06
公開日2011-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop.
Biol.Chem., 392, 2011
3MWK
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Q28E mutant of HERA N-terminal RecA-like domain, complex with 8-oxo-AMP
分子名称: Heat resistant RNA dependent ATPase, SULFATE ION, [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate
著者Rudolph, M.G, Klostermeier, D.
登録日2010-05-06
公開日2011-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop.
Biol.Chem., 392, 2011
3NBF
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BU of 3nbf by Molmil
Q28E mutant of hera helicase N-terminal domain bound to 8-oxo-ADP
分子名称: Heat resistant RNA dependent ATPase, [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate, [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate
著者Rudolph, M.G, Klostermeier, D.
登録日2010-06-03
公開日2011-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop.
Biol.Chem., 392, 2011
4I68
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Crystal structure of the R444A / R449A double mutant of the HERA RNA helicase RRM domain
分子名称: CHLORIDE ION, Heat resistant RNA dependent ATPase, ZINC ION
著者Rudolph, M.G, Klostermeier, D.
登録日2012-11-29
公開日2013-04-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Recognition of two distinct elements in the RNA substrate by the RNA-binding domain of the T. thermophilus DEAD box helicase Hera.
Nucleic Acids Res., 41, 2013
4I67
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Crystal structure of the RRM domain of RNA helicase HERA from T. thermophilus in complex with GGGC RNA
分子名称: 5'-R(P*GP*GP*GP*(RPC))-3', Heat resistant RNA dependent ATPase
著者Rudolph, M.G, Klostermeier, D.
登録日2012-11-29
公開日2013-04-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Recognition of two distinct elements in the RNA substrate by the RNA-binding domain of the T. thermophilus DEAD box helicase Hera.
Nucleic Acids Res., 41, 2013
4I69
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Crystal structure of the K463A mutant of the RRM domain of RNA helicase HERA from T. thermophilus
分子名称: CHLORIDE ION, Heat resistant RNA dependent ATPase
著者Rudolph, M.G, Klostermeier, D.
登録日2012-11-29
公開日2013-04-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Recognition of two distinct elements in the RNA substrate by the RNA-binding domain of the T. thermophilus DEAD box helicase Hera.
Nucleic Acids Res., 41, 2013

 

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