1MPY
| STRUCTURE OF CATECHOL 2,3-DIOXYGENASE (METAPYROCATECHASE) FROM PSEUDOMONAS PUTIDA MT-2 | 分子名称: | ACETONE, CATECHOL 2,3-DIOXYGENASE, FE (II) ION | 著者 | Kita, A, Kita, S, Fujisawa, I, Inaka, K, Ishida, T, Horiike, K, Nozaki, M, Miki, K. | 登録日 | 1998-10-20 | 公開日 | 1999-05-18 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | An archetypical extradiol-cleaving catecholic dioxygenase: the crystal structure of catechol 2,3-dioxygenase (metapyrocatechase) from Ppseudomonas putida mt-2. Structure Fold.Des., 7, 1999
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1FVP
| FLAVOPROTEIN 390 | 分子名称: | 6-(3-TETRADECANOIC ACID) FLAVINE MONONUCLEOTIDE, FLAVOPROTEIN 390 | 著者 | Kita, A, Miki, K. | 登録日 | 1995-07-07 | 公開日 | 1995-10-15 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Structure of flavoprotein FP390 from a luminescent bacterium Photobacterium phosphoreum refined at 2.7 A resolution. Acta Crystallogr.,Sect.D, 52, 1996
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1IT6
| CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN CALYCULIN A AND THE CATALYTIC SUBUNIT OF PROTEIN PHOSPHATASE 1 | 分子名称: | CALYCULIN A, MANGANESE (II) ION, SERINE/THREONINE PROTEIN PHOSPHATASE 1 GAMMA (PP1-GAMMA) CATALYTIC SUBUNIT | 著者 | Kita, A, Matsunaga, S, Takai, A, Kataiwa, H, Wakimoto, T, Fusetani, N, Isobe, M, Miki, K. | 登録日 | 2002-01-09 | 公開日 | 2002-05-22 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of the complex between calyculin A and the catalytic subunit of protein phosphatase 1. Structure, 10, 2002
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8JVC
| Crystal structure of dephospho-coenzyme A kinase | 分子名称: | GTP-dependent dephospho-CoA kinase | 著者 | Kita, A, Ishida, Y, Shimosaka, T, Michimori, Y, Makarova, K, Koonin, E, Atomi, H, Miki, K. | 登録日 | 2023-06-28 | 公開日 | 2024-06-19 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | Crystal structure of GTP-dependent dephospho-coenzyme A kinase from the hyperthermophilic archaeon, Thermococcus kodakarensis. Proteins, 92, 2024
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8JVG
| Crystal structure of dephospho-coenzyme A kinase | 分子名称: | GTP-dependent dephospho-CoA kinase | 著者 | Kita, A, Ishida, Y, Shimosaka, T, Michimori, Y, Makarova, K, Koonin, E, Atomi, H, Miki, K. | 登録日 | 2023-06-28 | 公開日 | 2024-06-19 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structure of GTP-dependent dephospho-coenzyme A kinase from the hyperthermophilic archaeon, Thermococcus kodakarensis. Proteins, 92, 2024
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8JVF
| Crystal structure of dephospho-coenzyme A kinase | 分子名称: | GTP-dependent dephospho-CoA kinase, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION | 著者 | Kita, A, Ishida, Y, Shimosaka, T, Michimori, Y, Makarova, K, Koonin, E, Atomi, H, Miki, K. | 登録日 | 2023-06-28 | 公開日 | 2024-06-19 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structure of GTP-dependent dephospho-coenzyme A kinase from the hyperthermophilic archaeon, Thermococcus kodakarensis. Proteins, 92, 2024
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8H8Q
| Fab-amyloid beta fragment complex at neutral pH | 分子名称: | CHLORIDE ION, Fab, GLN-LYS-CYS-VAL-PHE-PHE-ALA-GLU-ASP-VAL-GLY-SER-ASN-CYS-GLY, ... | 著者 | Kita, A, Irie, K, Irie, Y, Matsushima, Y, Miki, K. | 登録日 | 2022-10-24 | 公開日 | 2023-10-25 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Fab-amyloid beta fragment complex at neutral pH To Be Published
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5B06
| Lysozyme (denatured by NaOD and refolded) | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ... | 著者 | Kita, A, Morimoto, Y. | 登録日 | 2015-10-28 | 公開日 | 2016-01-13 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | An Effective Deuterium Exchange Method for Neutron Crystal Structure Analysis with Unfolding-Refolding Processes Mol Biotechnol., 58, 2016
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7FG8
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7FGV
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7FGU
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5B05
| Lysozyme (control experiment) | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ... | 著者 | Kita, A, Morimoto, Y. | 登録日 | 2015-10-28 | 公開日 | 2016-01-13 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | An Effective Deuterium Exchange Method for Neutron Crystal Structure Analysis with Unfolding-Refolding Processes Mol Biotechnol., 58, 2016
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5B07
| Lysozyme (denatured by DCl and refolded) | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ... | 著者 | Kita, A, Morimoto, Y. | 登録日 | 2015-10-28 | 公開日 | 2016-01-13 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | An Effective Deuterium Exchange Method for Neutron Crystal Structure Analysis with Unfolding-Refolding Processes Mol Biotechnol., 58, 2016
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7E6P
| Fab-amyloid beta fragment complex | 分子名称: | 1,2-ETHANEDIOL, Amyloid beta fragment with an intramolecular disulfide bond at positions 17 and 28, DI(HYDROXYETHYL)ETHER, ... | 著者 | Kita, A, Irie, K, Irie, Y, Miki, K. | 登録日 | 2021-02-23 | 公開日 | 2022-01-05 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Characterization of a Conformation-Restricted Amyloid beta Peptide and Immunoreactivity of Its Antibody in Human AD brain. Acs Chem Neurosci, 12, 2021
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5X4A
| SLL-2-Forssman antigen tetrasaccharides complex | 分子名称: | 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Galactose-binding lectin, ... | 著者 | Kita, A, Miki, K. | 登録日 | 2017-02-11 | 公開日 | 2017-09-20 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (3.4 Å) | 主引用文献 | Crystal structure of octocoral lectin SLL-2 complexed with Forssman antigen tetrasaccharide. Glycobiology, 2017
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6JBC
| Phosphotransferase related to CoA biosynthesis pathway | 分子名称: | 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ... | 著者 | Kita, A, Kishimoto, A, Shimosaka, T, Tomita, H, Yokooji, Y, Imanaka, T, Atomi, H, Miki, K. | 登録日 | 2019-01-25 | 公開日 | 2020-01-29 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structure of pantoate kinase from Thermococcus kodakarensis. Proteins, 88, 2020
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6JBD
| Phosphotransferase-ATP complex related to CoA biosynthesis pathway | 分子名称: | 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ... | 著者 | Kita, A, Kishimoto, A, Shimosaka, T, Tomita, H, Yokooji, Y, Imanaka, T, Atomi, H, Miki, K. | 登録日 | 2019-01-25 | 公開日 | 2020-01-29 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structure of pantoate kinase from Thermococcus kodakarensis. Proteins, 88, 2020
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1X0P
| Structure of a cyanobacterial BLUF protein, Tll0078 | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, hypothetical protein Tll0078 | 著者 | Kita, A, Okajima, K, Morimoto, Y, Ikeuchi, M, Miki, K. | 登録日 | 2005-03-27 | 公開日 | 2005-06-07 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure of a Cyanobacterial BLUF Protein, Tll0078, Containing a Novel FAD-binding Blue Light Sensor Domain J.Mol.Biol., 349, 2005
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6K8G
| H/D exchanged Hen egg-white lysozyme | 分子名称: | CHLORIDE ION, Lysozyme C, SODIUM ION | 著者 | Kita, A, Morimoto, Y. | 登録日 | 2019-06-11 | 公開日 | 2020-06-17 | 最終更新日 | 2024-04-03 | 実験手法 | NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION | 主引用文献 | Hydrogen/deuterium exchange behavior in tetragonal hen egg-white lysozyme crystals affected by solution state. J.Appl.Crystallogr., 53, 2020
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2ZSK
| Crystal structure of PH1733, an aspartate racemase homologue, from Pyrococcus horikoshii OT3 | 分子名称: | 226aa long hypothetical aspartate racemase | 著者 | Kita, A, Tasaki, S, Yohda, M, Miki, K. | 登録日 | 2008-09-12 | 公開日 | 2008-10-21 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.55 Å) | 主引用文献 | Crystal structure of PH1733, an aspartate racemase homologue, from pyrococcus horikoshii OT3 Proteins, 74, 2009
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3AJX
| Crystal Structure of 3-Hexulose-6-Phosphate Synthase | 分子名称: | 3-hexulose-6-phosphate synthase, CHLORIDE ION, MAGNESIUM ION, ... | 著者 | Kita, A, Orita, I, Yurimoto, H, Kato, N, Sakai, Y, Miki, K. | 登録日 | 2010-06-24 | 公開日 | 2010-11-03 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Crystal structure of 3-hexulose-6-phosphate synthase, a member of the orotidine 5'-monophosphate decarboxylase suprafamily Proteins, 78, 2010
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3WMQ
| Crystal structure of the complex between SLL-2 and GalNAc. | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Kita, A, Jimbo, M, Sakai, R, Morimoto, Y, Miki, K. | 登録日 | 2013-11-22 | 公開日 | 2015-01-14 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Crystal structure of a symbiosis-related lectin from octocoral. Glycobiology, 25, 2015
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3WMP
| Crystal structure of SLL-2 | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Kita, A, Jimbo, M, Sakai, R, Morimoto, Y, Miki, K. | 登録日 | 2013-11-22 | 公開日 | 2015-01-14 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of a symbiosis-related lectin from octocoral. Glycobiology, 25, 2015
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3AWI
| Bifunctional tRNA modification enzyme MnmC from Escherichia coli | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC | 著者 | Kitamura, A, Sengoku, T, Nishimoto, M, Yokoyama, S, Bessho, Y. | 登録日 | 2011-03-23 | 公開日 | 2011-06-01 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Crystal structure of the bifunctional tRNA modification enzyme MnmC from Escherichia coli Protein Sci., 2011
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1QGI
| CHITOSANASE FROM BACILLUS CIRCULANS | 分子名称: | 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (CHITOSANASE), SULFATE ION | 著者 | Saito, J, Kita, A, Higuchi, Y, Nagata, Y, Ando, A, Miki, K. | 登録日 | 1999-04-28 | 公開日 | 1999-10-25 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Crystal structure of chitosanase from Bacillus circulans MH-K1 at 1.6-A resolution and its substrate recognition mechanism. J.Biol.Chem., 274, 1999
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