Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 62 件

3KWE
DownloadVisualize
BU of 3kwe by Molmil
Inactive truncation of the beta-carboxysomal gamma-Carbonic Anhydrase, CcmM, form 2
分子名称: CHLORIDE ION, Carbon dioxide concentrating mechanism protein, HEXANE-1,6-DIOL, ...
著者Kimber, M.S, Castel, S.E, Pena, K.L.
登録日2009-12-01
公開日2010-02-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural basis of the oxidative activation of the carboxysomal {gamma}-carbonic anhydrase, CcmM.
Proc.Natl.Acad.Sci.USA, 107, 2010
2R5O
DownloadVisualize
BU of 2r5o by Molmil
Crystal structure of the C-terminal domain of wzt
分子名称: CHLORIDE ION, Putative ATP binding component of ABC-transporter, SODIUM ION, ...
著者Kimber, M.S, Cuthbertson, L, Whitfield, C.
登録日2007-09-04
公開日2007-12-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Substrate binding by a bacterial ABC transporter involved in polysaccharide export.
Proc.Natl.Acad.Sci.Usa, 104, 2007
5HNP
DownloadVisualize
BU of 5hnp by Molmil
The structure of the kdo-capped saccharide binding subunit of the O-12 specific ABC transporter, Wzt
分子名称: ABC transporter, CHLORIDE ION
著者Mallette, E, Mann, E, Whitfield, C, Kimber, M.S.
登録日2016-01-18
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Klebsiella pneumoniae O12 ATP-binding Cassette (ABC) Transporter Recognizes the Terminal Residue of Its O-antigen Polysaccharide Substrate.
J.Biol.Chem., 291, 2016
1EJ2
DownloadVisualize
BU of 1ej2 by Molmil
Crystal structure of methanobacterium thermoautotrophicum nicotinamide mononucleotide adenylyltransferase with bound NAD+
分子名称: NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
著者Saridakis, V, Christendat, D, Kimber, M.S, Edwards, A.M, Pai, E.F, Midwest Center for Structural Genomics (MCSG), Northeast Structural Genomics Consortium (NESG)
登録日2000-02-29
公開日2001-03-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes.
J.Biol.Chem., 276, 2001
1HYB
DownloadVisualize
BU of 1hyb by Molmil
CRYSTAL STRUCTURE OF AN ACTIVE SITE MUTANT OF METHANOBACTERIUM THERMOAUTOTROPHICUM NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE, SULFATE ION
著者Saridakis, V, Christendat, D, Kimber, M.S, Edwards, A.M, Pai, E.F.
登録日2001-01-18
公開日2001-03-14
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes.
J.Biol.Chem., 276, 2001
5L39
DownloadVisualize
BU of 5l39 by Molmil
The structure of the fused permuted hexameric shell protein MSM0275 from the RMM microcompartment
分子名称: CHLORIDE ION, RMM microcompartment shell protein MSM0275
著者Mallette, E, Kimber, M.S.
登録日2016-08-03
公開日2016-12-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
7UTF
DownloadVisualize
BU of 7utf by Molmil
Structure-Function characterization of an aldo-keto reductase involved in detoxification of the mycotoxin, deoxynivalenol
分子名称: CITRATE ANION, Putative oxidoreductase, aryl-alcohol dehydrogenase like protein, ...
著者Abraham, N, Schroeter, K.L, Kimber, M.S, Seah, S.Y.K.
登録日2022-04-26
公開日2022-09-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-function characterization of an aldo-keto reductase involved in detoxification of the mycotoxin, deoxynivalenol.
Sci Rep, 12, 2022
4JN6
DownloadVisualize
BU of 4jn6 by Molmil
Crystal Structure of the Aldolase-Dehydrogenase Complex from Mycobacterium tuberculosis HRv37
分子名称: 4-hydroxy-2-oxovalerate aldolase, Acetaldehyde dehydrogenase, MANGANESE (II) ION, ...
著者Carere, J, McKenna, S.E, Kimber, M.S, Seah, S.Y.K.
登録日2013-03-14
公開日2013-05-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Characterization of an Aldolase-Dehydrogenase Complex from the Cholesterol Degradation Pathway of Mycobacterium tuberculosis.
Biochemistry, 52, 2013
8VWR
DownloadVisualize
BU of 8vwr by Molmil
Structure of steroid hydratase from Comamonas testosteroni
分子名称: Acyl dehydratase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Schroeter, K.L, Forrester, T.J.B, Kimber, M.S, Seah, S.Y.K.
登録日2024-02-02
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Shy is a Proteobacterial steroid hydratase which catalyzes steroid side chain degradation without requiring a catalytically inert partner domain.
J.Biol.Chem., 2024
6EF6
DownloadVisualize
BU of 6ef6 by Molmil
Structure of the microcompartment-associated aminopropanol kinase
分子名称: (2R)-1-methoxypropan-2-amine, ACETATE ION, Aminoglycoside phosphotransferase, ...
著者Mallette, E, Kimber, M.S.
登録日2018-08-16
公開日2018-10-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural and kinetic characterization of (S)-1-amino-2-propanol kinase from the aminoacetone utilization microcompartment ofMycobacterium smegmatis.
J.Biol.Chem., 293, 2018
4FXQ
DownloadVisualize
BU of 4fxq by Molmil
Full-length Certhrax toxin from Bacillus cereus in complex with Inhibitor P6
分子名称: 8-fluoro-2-(3-piperidin-1-ylpropanoyl)-1,3,4,5-tetrahydrobenzo[c][1,6]naphthyridin-6(2H)-one, CHLORIDE ION, Putative ADP-ribosyltransferase Certhrax, ...
著者Visschedyk, D.D, Dimov, S, Kimber, M.S, Park, H.W, Merrill, A.R.
登録日2012-07-03
公開日2012-09-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9599 Å)
主引用文献Certhrax Toxin, an Anthrax-related ADP-ribosyltransferase from Bacillus cereus.
J.Biol.Chem., 287, 2012
5L38
DownloadVisualize
BU of 5l38 by Molmil
The structure of the hexagonal shell protein MSM0272 from the RMM microcompartment
分子名称: CHLORIDE ION, MSM0272 - RMM microcompartment shell protein, SODIUM ION
著者Mallette, E, Kimber, M.S.
登録日2016-08-03
公開日2016-12-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
5L37
DownloadVisualize
BU of 5l37 by Molmil
The structure of the pentameric shell protein MSM0273 from the RMM microcompartment
分子名称: MSM0273
著者Mallette, E, Kimber, M.S.
登録日2016-08-03
公開日2016-12-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
5CGZ
DownloadVisualize
BU of 5cgz by Molmil
Crystal structure of GalB, the 4-carboxy-2-hydroxymuconate hydratase, from Pseuodomonas putida KT2440
分子名称: 4-oxalmesaconate hydratase, GLYCEROL, ZINC ION
著者Mazurkewich, S, Brott, A.S, Kimber, M.S, Seah, S.Y.K.
登録日2015-07-09
公開日2016-02-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.103 Å)
主引用文献Structural and Kinetic Characterization of the 4-Carboxy-2-hydroxymuconate Hydratase from the Gallate and Protocatechuate 4,5-Cleavage Pathways of Pseudomonas putida KT2440.
J.Biol.Chem., 291, 2016
6CI9
DownloadVisualize
BU of 6ci9 by Molmil
RMM microcompartment-associated aminopropanol dehydrogenase NADP + aminoacetone holo-structure
分子名称: 1-aminopropan-2-one, 3-oxoacyl-[acyl-carrier-protein] reductase, CHLORIDE ION, ...
著者Mallette, E, Kimber, M.S.
登録日2018-02-23
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and Kinetics of the S-(+)-1-Amino-2-propanol Dehydrogenase from the RMM Microcompartment of Mycobacterium smegmatis.
Biochemistry, 57, 2018
6CI8
DownloadVisualize
BU of 6ci8 by Molmil
Structure of the microcompartment-associated aminoacetone dehydrogenase
分子名称: 3-oxoacyl-[acyl-carrier-protein] reductase, CHLORIDE ION
著者Mallette, E, Kimber, M.S.
登録日2018-02-23
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and Kinetics of the S-(+)-1-Amino-2-propanol Dehydrogenase from the RMM Microcompartment of Mycobacterium smegmatis.
Biochemistry, 57, 2018
5DKO
DownloadVisualize
BU of 5dko by Molmil
The structure of Escherichia coli ZapD
分子名称: Cell division protein ZapD, SULFATE ION
著者Wroblewski, C, Kimber, M.S.
登録日2015-09-03
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and Mutational Analyses of Escherichia coli ZapD Reveal Charged Residues Involved in FtsZ Filament Bundling.
J.Bacteriol., 198, 2016
5SUH
DownloadVisualize
BU of 5suh by Molmil
The structure of double ringed trimeric shell protein MSM0271 from the RMM microcompartment
分子名称: MSM0271 protein
著者Mallette, E, Kimber, M.S.
登録日2016-08-03
公開日2016-12-14
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
5FA1
DownloadVisualize
BU of 5fa1 by Molmil
The structure of the beta-3-deoxy-D-manno-oct-2-ulosonic acid transferase domain of WbbB
分子名称: CYTIDINE-5'-MONOPHOSPHATE, Putative N-acetyl glucosaminyl transferase
著者Mallette, E, Ovchinnikova, O.G, Whitfield, C, Kimber, M.S.
登録日2015-12-10
公開日2016-05-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Bacterial beta-Kdo glycosyltransferases represent a new glycosyltransferase family (GT99).
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5FA0
DownloadVisualize
BU of 5fa0 by Molmil
The structure of the beta-3-deoxy-D-manno-oct-2-ulosonic acid transferase domain from WbbB
分子名称: CHLORIDE ION, Putative N-acetyl glucosaminyl transferase
著者Mallette, E, Ovchinnikova, O.G, Whitfield, C, Kimber, M.S.
登録日2015-12-10
公開日2016-05-18
最終更新日2018-04-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bacterial beta-Kdo glycosyltransferases represent a new glycosyltransferase family (GT99).
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5HNO
DownloadVisualize
BU of 5hno by Molmil
The structure of the kdo-capped saccharide binding subunit of the O-12 specific ABC transporter, Wzt
分子名称: ABC type transport system putative ATP binding protein, CHLORIDE ION
著者Mallette, E, Mann, E, Whitfield, C, Kimber, M.S.
登録日2016-01-18
公開日2016-03-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Klebsiella pneumoniae O12 ATP-binding Cassette (ABC) Transporter Recognizes the Terminal Residue of Its O-antigen Polysaccharide Substrate.
J.Biol.Chem., 291, 2016
8CSF
DownloadVisualize
BU of 8csf by Molmil
WbbB D232C-Kdo adduct + alpha-Rha(1,3)GlcNAc ternary complex
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, CYTIDINE-5'-MONOPHOSPHATE, N-acetyl glucosaminyl transferase, ...
著者Forrester, T.J.B, Kimber, M.S.
登録日2022-05-12
公開日2022-11-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022
8CSE
DownloadVisualize
BU of 8cse by Molmil
WbbB in complex with alpha-Rha-(1-3)-beta-GlcNAc acceptor
分子名称: CYTIDINE-5'-MONOPHOSPHATE, N-(8-hydroxyoctyl)-4-methoxybenzamide, N-acetyl glucosaminyl transferase, ...
著者Forrester, T.J.B, Kimber, M.S.
登録日2022-05-12
公開日2022-11-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022
8CSB
DownloadVisualize
BU of 8csb by Molmil
WbbB D232N in complex with CMP-beta-Kdo
分子名称: CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-BETA-D-GULO-OCT-2-ULO-PYRANOSONIC ACID, CYTIDINE-5'-MONOPHOSPHATE, N-acetyl glucosaminyl transferase, ...
著者Forrester, T.J.B, Kimber, M.S.
登録日2022-05-12
公開日2022-11-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022
8CSD
DownloadVisualize
BU of 8csd by Molmil
WbbB D232C Kdo adduct
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, CHLORIDE ION, CYTIDINE-5'-MONOPHOSPHATE, ...
著者Forrester, T.J.B, Kimber, M.S.
登録日2022-05-12
公開日2022-11-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon