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PDB: 214 results

4L0U
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Crystal structure of Plasmodium vivax Prx1a
Descriptor: 2-Cys peroxiredoxin, putative, ACETATE ION
Authors:Gretes, M.C, Karplus, P.A.
Deposit date:2013-06-01
Release date:2016-11-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Observed octameric assembly of a Plasmodium yoelii peroxiredoxin can be explained by the replacement of native "ball-and-socket" interacting residues by an affinity tag.
Protein Sci., 22, 2013
3FM7
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Quaternary Structure of Drosophila melanogaster IC/Tctex-1/LC8; Allosteric Interactions of Dynein Light Chains with Dynein Intermediate Chain
Descriptor: Dynein intermediate chain, cytosolic, Dynein light chain 1, ...
Authors:Hall, J.D, Karplus, P.A, Barbar, E.J.
Deposit date:2008-12-19
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Multivalency in the assembly of intrinsically disordered Dynein intermediate chain.
J.Biol.Chem., 284, 2009
4IEQ
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BU of 4ieq by Molmil
unliganded Cysteine Dioxygenase at pH 5.0 in the presence of Cys
Descriptor: Cysteine dioxygenase type 1, FE (II) ION
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.396 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4IEY
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Cys-persulfenate bound Cysteine Dioxygenase at pH 7.0 in the presence of Cys, home-source structure
Descriptor: Cysteine dioxygenase type 1, FE (II) ION, S-HYDROPEROXYCYSTEINE
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4L0W
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Plasmodium yoelii Prx1a modified at the N-terminus forms an artifactual octamer
Descriptor: ACETATE ION, SULFATE ION, Thioredoxin peroxidase 1
Authors:Gretes, M.C, Karplus, P.A.
Deposit date:2013-06-01
Release date:2016-11-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Observed octameric assembly of a Plasmodium yoelii peroxiredoxin can be explained by the replacement of native "ball-and-socket" interacting residues by an affinity tag.
Protein Sci., 22, 2013
3DJG
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BU of 3djg by Molmil
Catalytic cycle of human glutathione reductase near 1 A resolution
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Glutathione reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Berkholz, D.S, Faber, H.R, Savvides, S.N, Karplus, P.A.
Deposit date:2008-06-23
Release date:2008-08-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic cycle of human glutathione reductase near 1 A resolution.
J.Mol.Biol., 382, 2008
3DK8
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BU of 3dk8 by Molmil
Catalytic cycle of human glutathione reductase near 1 A resolution
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE, GLYCEROL, ...
Authors:Berkholz, D.S, Faber, H.R, Savvides, S.N, Karplus, P.A.
Deposit date:2008-06-24
Release date:2008-08-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Catalytic cycle of human glutathione reductase near 1 A resolution.
J.Mol.Biol., 382, 2008
4IEP
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BU of 4iep by Molmil
unliganded Cysteine Dioxygenase at pH 4.5 in the presence of Cys
Descriptor: Cysteine dioxygenase type 1, FE (II) ION
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4IEU
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BU of 4ieu by Molmil
Cys-persulfenate bound Cysteine Dioxygenase at pH 7.0 in the presence of Cys
Descriptor: Cysteine dioxygenase type 1, FE (II) ION, S-HYDROPEROXYCYSTEINE
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4IER
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BU of 4ier by Molmil
Cys-persulfenate bound Cysteine Dioxygenase at pH 5.5 in the presence of Cys
Descriptor: Cysteine dioxygenase type 1, FE (II) ION, S-HYDROPEROXYCYSTEINE
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4IEZ
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BU of 4iez by Molmil
unliganded Cysteine Dioxygenase at pH 8.0
Descriptor: Cysteine dioxygenase type 1, FE (II) ION
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4IEO
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BU of 4ieo by Molmil
unliganded Cysteine Dioxygenase at pH 4.0 in the presence of Cys
Descriptor: Cysteine dioxygenase type 1, FE (II) ION
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4IEV
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BU of 4iev by Molmil
Cys-only bound Cysteine Dioxygenase at pH 8.0 in the presence of Cys
Descriptor: CYSTEINE, Cysteine dioxygenase type 1, FE (II) ION
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4IET
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BU of 4iet by Molmil
Cys-persulfenate bound Cysteine Dioxygenase at pH 6.8 in the presence of Cys
Descriptor: Cysteine dioxygenase type 1, FE (II) ION, S-HYDROPEROXYCYSTEINE
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2015-06-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Cysteine dioxygenase structures from pH4 to 9: consistent cys-persulfenate formation at intermediate pH and a Cys-bound enzyme at higher pH.
J.Mol.Biol., 425, 2013
1JB9
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BU of 1jb9 by Molmil
Crystal Structure of The Ferredoxin:NADP+ Reductase From Maize Root AT 1.7 Angstroms
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, ferredoxin-NADP reductase
Authors:Faber, H.R, Karplus, P.A, Aliverti, A, Ferioli, C, Spinola, M.
Deposit date:2001-06-03
Release date:2001-07-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Biochemical and crystallographic characterization of ferredoxin-NADP(+) reductase from nonphotosynthetic tissues.
Biochemistry, 40, 2001
1BWK
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BU of 1bwk by Molmil
OLD YELLOW ENZYME (OYE1) MUTANT H191N
Descriptor: FLAVIN MONONUCLEOTIDE, PROTEIN (NADPH DEHYDROGENASE 1)
Authors:Brown, B.J, Deng, Z, Karplus, P.A, Massey, V.
Deposit date:1998-09-24
Release date:1998-09-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:On the active site of Old Yellow Enzyme. Role of histidine 191 and asparagine 194.
J.Biol.Chem., 273, 1998
1YQZ
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BU of 1yqz by Molmil
Structure of Coenzyme A-Disulfide Reductase from Staphylococcus aureus refined at 1.54 Angstrom resolution
Descriptor: CHLORIDE ION, COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Mallett, T.C, Wallen, J.R, Sakai, H, Luba, J, Parsonage, D, Karplus, P.A, Tsukihara, T, Claiborne, A.
Deposit date:2005-02-02
Release date:2006-05-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure of coenzyme A-disulfide reductase from Staphylococcus aureus at 1.54 A resolution.
Biochemistry, 45, 2006
1BWL
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BU of 1bwl by Molmil
OLD YELLOW ENZYME (OYE1) DOUBLE MUTANT H191N:N194H
Descriptor: FLAVIN MONONUCLEOTIDE, PROTEIN (NADPH DEHYDROGENASE 1)
Authors:Brown, B.J, Deng, Z, Karplus, P.A, Massey, V.
Deposit date:1998-09-24
Release date:1998-09-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:On the active site of Old Yellow Enzyme. Role of histidine 191 and asparagine 194.
J.Biol.Chem., 273, 1998
1YF1
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BU of 1yf1 by Molmil
Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SODIUM ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-29
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
1ZLE
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BU of 1zle by Molmil
Crystal structure of a RGD-containing host-selective toxin: Pyrenophora tritici-repentis Ptr ToxA
Descriptor: NICKEL (II) ION, Ptr necrosis toxin
Authors:Sarma, G.N, Manning, V.A, Ciuffetti, L.M, Karplus, P.A.
Deposit date:2005-05-06
Release date:2005-08-16
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Ptr ToxA: An RGD-Containing Host-Selective Toxin from Pyrenophora tritici-repentis
Plant Cell, 17, 2005
1YEP
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BU of 1yep by Molmil
Structural and biochemical analysis of the link between enzymatic activity and olgomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SULFATE ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-28
Release date:2005-08-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
1YF0
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BU of 1yf0 by Molmil
Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SULFATE ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-29
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
1XAN
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BU of 1xan by Molmil
HUMAN GLUTATHIONE REDUCTASE IN COMPLEX WITH A XANTHENE INHIBITOR
Descriptor: 3,6-DIHYDROXY-XANTHENE-9-PROPIONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE REDUCTASE
Authors:Savvides, S.N, Karplus, P.A.
Deposit date:1996-01-26
Release date:1996-07-11
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Kinetics and crystallographic analysis of human glutathione reductase in complex with a xanthene inhibitor.
J.Biol.Chem., 271, 1996
1XIY
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Crystal Structure of Plasmodium falciparum antioxidant protein (1-Cys peroxiredoxin)
Descriptor: peroxiredoxin
Authors:Sarma, G.N, Fischer, M, Nickel, C, Becker, K, Karplus, P.A.
Deposit date:2004-09-22
Release date:2005-02-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a novel Plasmodium falciparum 1-Cys peroxiredoxin.
J.Mol.Biol., 346, 2005
1ZLD
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Crystal structure of a RGD-containing host-selective toxin: Pyrenophora tritici-repentis Ptr ToxA
Descriptor: Ptr necrosis toxin, SULFATE ION
Authors:Sarma, G.N, Manning, V.A, Ciuffetti, L.M, Karplus, P.A.
Deposit date:2005-05-06
Release date:2005-08-16
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of Ptr ToxA: An RGD-Containing Host-Selective Toxin from Pyrenophora tritici-repentis
Plant Cell, 17, 2005

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