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PDB: 181 件
4GF7
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BU of 4gf7 by Molmil
Crystal structure of 2-Methyl-3-hydroxypyridine-5-carboxylic acid oxygenase (MHPCO), unliganded form
分子名称: 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, BETA-MERCAPTOETHANOL, DI(HYDROXYETHYL)ETHER, ...
著者Kobayashi, J, Yoshida, H, Mikami, B, Hayashi, H, Kamitori, S, Sawa, Y, Yagi, T.
登録日2012-08-03
公開日2013-08-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.581 Å)
主引用文献Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase
To be Published
4H2N
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BU of 4h2n by Molmil
Crystal structure of MHPCO, Y270F mutant
分子名称: 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, BETA-MERCAPTOETHANOL, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Kobayashi, J, Yoshida, H, Mikami, B, Hayashi, H, Kamitori, S, Yagi, T.
登録日2012-09-12
公開日2013-09-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase
To be Published
4H2Q
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BU of 4h2q by Molmil
structure of MHPCO-5HN complex
分子名称: 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, 5-hydroxypyridine-3-carboxylic acid, BETA-MERCAPTOETHANOL, ...
著者Kobayashi, J, Yoshida, H, Mikami, B, Hayashi, H, Kamitori, S, Yagi, T.
登録日2012-09-13
公開日2013-09-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.502 Å)
主引用文献Crystal structure of 2-Methyl-3-hydroxypyridiine-5-carboxylic acid oxygenase
To be Published
4H2R
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BU of 4h2r by Molmil
Structure of MHPCO Y270F mutant, 5-hydroxynicotinic acid complex
分子名称: 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, 5-hydroxypyridine-3-carboxylic acid, BETA-MERCAPTOETHANOL, ...
著者Kobayashi, J, Yoshida, H, Mikami, B, Hayashi, H, Kamitori, S, Yagi, T.
登録日2012-09-13
公開日2013-09-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.473 Å)
主引用文献Crystal structure of 2-Methyl-3-hydroxypyridine-5-carboxylic acid oxygenase
To be Published
2ECE
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BU of 2ece by Molmil
X-ray structure of hypothetical selenium-binding protein from Sulfolobus tokodaii, ST0059
分子名称: 462aa long hypothetical selenium-binding protein
著者Yamada, M, Yoshida, H, Kuramitsu, S, Kamitori, S.
登録日2007-02-13
公開日2008-01-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray structure of hypothetical selenium-binding protein from Sulfolobus tokodaii, ST0059
To be Published
2Z8G
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BU of 2z8g by Molmil
Aspergillus niger ATCC9642 isopullulanase complexed with isopanose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Isopullulanase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-6)-beta-D-glucopyranose
著者Mizuno, M, Koide, A, Yamamura, A, Akeboshi, H, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T.
登録日2007-09-05
公開日2007-12-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
J.Mol.Biol., 376, 2008
2E6X
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BU of 2e6x by Molmil
X-ray structure of TT1592 from Thermus thermophilus HB8
分子名称: Hypothetical protein TTHA1281
著者Yamada, M, Nakagawa, N, Kanagawa, M, Kuramitsu, S, Kamitori, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-01-05
公開日2007-12-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray structure of TT1592 from Thermus thermophilus HB8
To be Published
2ZKN
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BU of 2zkn by Molmil
X-ray structure of mutant galectin-1/lactose complex
分子名称: Galectin-1, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Abe, A, Yoshida, H, Kamitori, S.
登録日2008-03-26
公開日2008-09-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Functional and structural bases of a cysteine-less mutant as a long-lasting substitute for galectin-1
Glycobiology, 18, 2008
3WV6
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BU of 3wv6 by Molmil
Crystal Structure of a protease-resistant mutant form of human galectin-9
分子名称: 1,2-ETHANEDIOL, Galectin-9, ZINC ION, ...
著者Yoshida, H, Kamitori, S.
登録日2014-05-16
公開日2015-05-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献X-ray structure of a protease-resistant mutant form of human galectin-9 having two carbohydrate recognition domains with a metal-binding site
Biochem.Biophys.Res.Commun., 490, 2017
3ALL
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BU of 3all by Molmil
Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, mutant Y270A
分子名称: 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, BETA-MERCAPTOETHANOL, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Kobayashi, J, Yoshida, H, Yoshikane, Y, Kamitori, S, Yagi, T.
登録日2010-08-04
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase
To be published
3ALJ
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BU of 3alj by Molmil
Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, reduced form
分子名称: 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, BETA-MERCAPTOETHANOL, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Kobayashi, J, Yoshida, H, Yoshikane, Y, Kamitori, S, Yagi, T.
登録日2010-08-04
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase
To be Published
3WUD
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BU of 3wud by Molmil
X-ray crystal structure of Xenopus laevis galectin-Ib
分子名称: Galectin, SULFATE ION, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
著者Nonaka, Y, Yoshida, H, Kamitori, S, Nakamura, T.
登録日2014-04-23
公開日2015-04-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Crystal structure of a Xenopus laevis skin proto-type galectin, close to but distinct from galectin-1.
Glycobiology, 25, 2015
1IZJ
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BU of 1izj by Molmil
Thermoactinomyces vulgaris R-47 alpha-amylase 1 mutant enzyme f313a
分子名称: CALCIUM ION, amylase
著者Ohtaki, A, Iguchi, A, Mizuno, M, Tonozuka, T, Sakano, Y, Kamitori, S.
登録日2002-10-03
公開日2003-07-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mutual conversion of substrate specificities of Thermoactinomyces vulgaris R-47 alpha-amylases TVAI and TVAII by site-directed mutagenesis
CARBOHYDR.RES., 338, 2003
1IZK
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BU of 1izk by Molmil
Thermoactinomyces vulgaris R-47 alpha-amylase 1 mutant enzyme w398v
分子名称: CALCIUM ION, amylase
著者Ohtaki, A, Iguchi, A, Mizuno, M, Tonozuka, T, Sakano, Y, Kamitori, S.
登録日2002-10-03
公開日2003-07-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mutual conversion of substrate specificities of Thermoactinomyces vulgaris R-47 alpha-amylases TVAI and TVAII by site-directed mutagenesis
CARBOHYDR.RES., 338, 2003
1ITT
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BU of 1itt by Molmil
Average Crystal Structure of (Pro-Pro-Gly)9 at 1.0 angstroms Resolution
分子名称: COLLAGEN TRIPLE HELIX
著者Hongo, C, Nagarajan, V, Noguchi, K, Kamitori, S, Okuyama, K, Tanaka, Y, Nishino, N.
登録日2002-02-03
公開日2003-02-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Average Crystal Structure of (Pro-Pro-Gly)9 at 1.0 angstroms Resolution
Plym.J., 33, 2001
1JIB
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BU of 1jib by Molmil
Complex of Alpha-amylase II (TVA II) from Thermoactinomyces vulgaris R-47 with Maltotetraose Based on a Crystal Soaked with Maltohexaose.
分子名称: NEOPULLULANASE, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Yokota, T, Tonozuka, T, Shimura, Y, Ichikawa, K, Kamitori, S, Sakano, Y.
登録日2001-07-02
公開日2001-07-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structures of Thermoactinomyces vulgaris R-47 alpha-amylase II complexed with substrate analogues.
Biosci.Biotechnol.Biochem., 65, 2001
1JL8
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BU of 1jl8 by Molmil
Complex of alpha-amylase II (TVA II) from Thermoactinomyces vulgaris R-47 with beta-cyclodextrin based on a co-crystallization with methyl beta-cyclodextrin
分子名称: ALPHA-AMYLASE II, Cycloheptakis-(1-4)-(alpha-D-glucopyranose)
著者Yokota, T, Tonozuka, T, Shimura, Y, Ichikawa, K, Kamitori, S, Sakano, Y.
登録日2001-07-16
公開日2001-08-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of Thermoactinomyces vulgaris R-47 alpha-amylase II complexed with substrate analogues.
Biosci.Biotechnol.Biochem., 65, 2001
2D2O
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BU of 2d2o by Molmil
Structure of a complex of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with maltohexaose demonstrates the important role of aromatic residues at the reducing end of the substrate binding cleft
分子名称: CALCIUM ION, Neopullulanase 2, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Ohtaki, A, Mizuno, M, Yoshida, H, Tonozuka, T, Sakano, Y, Kamitori, S.
登録日2005-09-13
公開日2006-08-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of a complex of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with maltohexaose demonstrates the important role of aromatic residues at the reducing end of the substrate binding cleft
Carbohydr.Res., 341, 2006
2ZYO
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BU of 2zyo by Molmil
Crystal structure of cyclo/maltodextrin-binding protein complexed with maltotetraose
分子名称: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, solute-binding protein
著者Matsumoto, M, Yamada, M, Kurakata, Y, Yoshida, H, Kamitori, S, Nishikawa, A, Tonozuka, T.
登録日2009-01-27
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structures of open and closed forms of cyclo/maltodextrin-binding protein
Febs J., 276, 2009
2ZYM
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BU of 2zym by Molmil
Crystal structure of cyclo/maltodextrin-binding protein complexed with alpha-cyclodextrin
分子名称: Cyclohexakis-(1-4)-(alpha-D-glucopyranose), Solute-binding protein
著者Matsumoto, M, Yamada, M, Kurakata, Y, Yoshida, H, Kamitori, S, Nishikawa, A, Tonozuka, T.
登録日2009-01-27
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of open and closed forms of cyclo/maltodextrin-binding protein
Febs J., 276, 2009
2ZYN
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BU of 2zyn by Molmil
Crystal structure of cyclo/maltodextrin-binding protein complexed with beta-cyclodextrin
分子名称: Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Solute-binding protein
著者Matsumoto, M, Yamada, M, Kurakata, Y, Yoshida, H, Kamitori, S, Nishikawa, A, Tonozuka, T.
登録日2009-01-27
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of open and closed forms of cyclo/maltodextrin-binding protein
Febs J., 276, 2009
3A6O
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BU of 3a6o by Molmil
Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase 2/acarbose complex
分子名称: ACARBOSE DERIVED PENTASACCHARIDE, CALCIUM ION, Neopullulanase 2
著者Ohtaki, A, Mizuno, M, Tonozuka, T, Sakano, Y, Kamitori, S.
登録日2009-09-07
公開日2009-09-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Complex structures of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with acarbose and cyclodextrins demonstrate the multiple substrate recognition mechanism
J.BIOL.CHEM., 279, 2004
3A9S
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BU of 3a9s by Molmil
X-ray Structure of Bacillus pallidus D-Arabinose Isomerase Complex with Glycerol
分子名称: D-arabinose isomerase, GLYCEROL, MANGANESE (II) ION
著者Takeda, K, Yoshida, H, Izumori, K, Kamitori, S.
登録日2009-11-05
公開日2010-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray structures of Bacillus pallidusd-arabinose isomerase and its complex with l-fucitol.
Biochim.Biophys.Acta, 1804, 2010
3A9R
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BU of 3a9r by Molmil
X-ray Structures of Bacillus pallidus D-Arabinose IsomeraseComplex with (4R)-2-METHYLPENTANE-2,4-DIOL
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, D-arabinose isomerase, MANGANESE (II) ION
著者Takeda, K, Yoshida, H, Izumori, K, Kamitori, S.
登録日2009-11-05
公開日2010-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献X-ray structures of Bacillus pallidusd-arabinose isomerase and its complex with l-fucitol.
Biochim.Biophys.Acta, 1804, 2010
3A9T
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BU of 3a9t by Molmil
X-ray Structure of Bacillus pallidus D-Arabinose Isomerase Complex with L-Fucitol
分子名称: D-arabinose isomerase, FUCITOL, MANGANESE (II) ION
著者Takeda, K, Yoshida, H, Izumori, K, Kamitori, S.
登録日2009-11-05
公開日2010-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献X-ray structures of Bacillus pallidusd-arabinose isomerase and its complex with l-fucitol.
Biochim.Biophys.Acta, 1804, 2010

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