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PDB: 492 件

3KYF
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Crystal structure of P4397 complexed with c-di-GMP
分子名称: GUANOSINE-5'-MONOPHOSPHATE, Putative uncharacterized protein
著者Ryu, K.S, Ko, J, Kim, H, Choi, B.S.
登録日2009-12-06
公開日2010-04-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of PP4397 Reveals the Molecular Basis for Different c-di-GMP Binding Modes by Pilz Domain Proteins.
J.Mol.Biol., 398, 2010
4FYB
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Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori
分子名称: GLYCEROL, Thiol:disulfide interchange protein (DsbC)
著者Yoon, J.Y, Kim, J, Lee, S.J, Im, H.N, Kim, H.S, Yoon, H, An, D.R, Kim, J.Y, Kim, S, Han, B.W, Suh, S.W.
登録日2012-07-04
公開日2013-05-08
最終更新日2013-09-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and functional characterization of HP0377, a thioredoxin-fold protein from Helicobacter pylori
Acta Crystallogr.,Sect.D, 69, 2013
4FYC
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Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori
分子名称: TETRAETHYLENE GLYCOL, Thiol:disulfide interchange protein (DsbC)
著者Yoon, J.Y, Kim, J, Lee, S.J, Im, H.N, Kim, H.S, Yoon, H, An, D.R, Kim, J.Y, Kim, S, Han, B.W, Suh, S.W.
登録日2012-07-04
公開日2013-05-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural and functional characterization of HP0377, a thioredoxin-fold protein from Helicobacter pylori
Acta Crystallogr.,Sect.D, 69, 2013
4ZYA
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BU of 4zya by Molmil
The N-terminal extension domain of human asparaginyl-tRNA synthetase
分子名称: Asparagine--tRNA ligase, cytoplasmic, CHLORIDE ION, ...
著者Park, J.S, Park, M.C, Goughnour, P, Kim, H.S, Kim, S.J, Kim, H.J, Kim, S.H, Han, B.W.
登録日2015-05-21
公開日2016-05-25
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Unique N-terminal extension domain of human asparaginyl-tRNA synthetase elicits CCR3-mediated chemokine activity.
Int. J. Biol. Macromol., 120, 2018
8JZJ
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BU of 8jzj by Molmil
E.coli Glyceraldehyde-3-phosphate dehydrogenase structure under cryoprotect condition of ammonium sulfate
分子名称: Glyceraldehyde-3-phosphate dehydrogenase, SULFATE ION
著者Jang, K, Hlaing, S.H.S, Kim, H.G, Kim, N, Choe, H.W, Kim, Y.J.
登録日2023-07-05
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献E.coli Glyceraldehyde-3-phosphate dehydrogenase structure under cryoprotect condition of ammonium sulfate
To Be Published
8GN5
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BU of 8gn5 by Molmil
Designed pH-responsive P22 VLP
分子名称: Major capsid protein
著者Kim, K.J, Kim, G, Bae, J.H, Song, J.J, Kim, H.S.
登録日2022-08-23
公開日2024-01-31
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (4.02 Å)
主引用文献A pH-Responsive Virus-Like Particle as a Protein Cage for a Targeted Delivery.
Adv Healthc Mater, 13, 2024
8KCA
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BU of 8kca by Molmil
Crystal structure of DDX53 helicase domain
分子名称: Probable ATP-dependent RNA helicase DDX53
著者Park, S, Yang, J.B, Jung, H.S, Kim, H.Y.
登録日2023-08-06
公開日2023-08-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural insight into crystal structure of helicase domain of DDX53.
Biochem.Biophys.Res.Commun., 677, 2023
4J15
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Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex
分子名称: Aspartate--tRNA ligase, cytoplasmic, GLYCEROL
著者Kim, K.R, Park, S.H, Kim, H.S, Kim, B.-G, Kim, D.G, Rhee, K.H, Park, M.S, Kim, H.-J, Kim, S, Han, B.W.
登録日2013-02-01
公開日2013-05-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex
Proteins, 81, 2013
5G2C
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BU of 5g2c by Molmil
The crystal structure of light-driven chloride pump ClR (T102D) mutant at pH 4.5.
分子名称: CHLORIDE ION, CHLORIDE PUMPING RHODOPSIN, DI(HYDROXYETHYL)ETHER, ...
著者Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
登録日2016-04-07
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G54
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The crystal structure of light-driven chloride pump ClR at pH 4.5
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
登録日2016-05-19
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G2D
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BU of 5g2d by Molmil
The crystal structure of light-driven chloride pump ClR (T102N) mutant at pH 4.5.
分子名称: CHLORIDE ION, CHLORIDE PUMP RHODOPSIN, DI(HYDROXYETHYL)ETHER, ...
著者Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
登録日2016-04-07
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G28
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BU of 5g28 by Molmil
The crystal structure of light-driven chloride pump ClR at pH 6.0.
分子名称: CHLORIDE ION, CHLORIDE PUMPING RHODOPSIN, OLEIC ACID, ...
著者Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
登録日2016-04-07
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G2A
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BU of 5g2a by Molmil
The crystal structure of light-driven chloride pump ClR at pH 6.0 with Bromide ion.
分子名称: BROMIDE ION, CHLORIDE PUMPING RHODOPSIN, RETINAL
著者Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
登録日2016-04-07
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
6XKU
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BU of 6xku by Molmil
R. capsulatus cyt bc1 with one FeS protein in b position and one in c position (CIII2 b-c)
分子名称: Cytochrome b, Cytochrome c1, FE2/S2 (INORGANIC) CLUSTER, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-27
公開日2020-12-30
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKZ
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BU of 6xkz by Molmil
R. capsulatus CIII2CIV tripartite super-complex, conformation B (SC-1B)
分子名称: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP,Cytochrome c-type cyt cy, Cytochrome b, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-27
公開日2020-12-30
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKW
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BU of 6xkw by Molmil
R. capsulatus CIII2CIV bipartite super-complex (SC-2A) with CcoH/cy
分子名称: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP, Cytochrome b, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-27
公開日2020-12-30
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (5.2 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
5FJG
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BU of 5fjg by Molmil
The crystal structure of light-driven chloride pump ClR in pH 4.5.
分子名称: ANHYDRORETINOL, CHLORIDE ION, CHLORIDE PUMPING RHODOPSIN, ...
著者Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
登録日2015-10-07
公開日2016-11-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Crystal Structure of Light-Driven Chloride Pump Clr in Ph 4.5.
To be Published
6XKX
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BU of 6xkx by Molmil
R. capsulatus CIII2CIV tripartite super-complex, conformation A (SC-1A)
分子名称: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP,Cytochrome c-type cyt cy, Cytochrome b, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-27
公開日2020-12-30
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
5CSS
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BU of 5css by Molmil
Crystal structure of triosephosphate isomerase from Thermoplasma acidophilum with glycerol 3-phosphate
分子名称: CHLORIDE ION, SN-GLYCEROL-3-PHOSPHATE, Triosephosphate isomerase
著者Park, S.H, Kim, H.S, Song, M.K, Kim, K.R, Park, J.S, Han, B.W.
登録日2015-07-23
公開日2016-06-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structure and Stability of the Dimeric Triosephosphate Isomerase from the Thermophilic Archaeon Thermoplasma acidophilum.
Plos One, 10, 2015
2F5G
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BU of 2f5g by Molmil
Crystal structure of IS200 transposase
分子名称: Transposase, putative
著者Lee, H.H, Yoon, J.Y, Kim, H.S, Kang, J.Y, Kim, K.H, Kim, D.J, Suh, S.W.
登録日2005-11-25
公開日2005-12-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of a Metal Ion-bound IS200 Transposase
J.Biol.Chem., 281, 2006
2F4F
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BU of 2f4f by Molmil
Crystal structure of IS200 transposase
分子名称: MANGANESE (II) ION, Transposase, putative
著者Lee, H.H, Yoon, J.Y, Kim, H.S, Kang, J.Y, Kim, K.H, Kim, D.J, Suh, S.W.
登録日2005-11-23
公開日2005-12-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of a Metal Ion-bound IS200 Transposase
J.Biol.Chem., 281, 2006
3GDE
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BU of 3gde by Molmil
The closed conformation of ATP-dependent DNA ligase from Archaeoglobus fulgidus
分子名称: DNA ligase, PHOSPHATE ION
著者Kim, D.J, Kim, H.-W, Kim, O, Kim, H.S, Lee, S.J, Suh, S.W.
登録日2009-02-24
公開日2009-12-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献ATP-dependent DNA ligase from Archaeoglobus fulgidus displays a tightly closed conformation
Acta Crystallogr.,Sect.F, 65, 2009
4G4Y
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BU of 4g4y by Molmil
Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii
分子名称: ALANINE, Outer membrane protein Omp38, SULFATE ION
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-16
公開日2013-07-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
To be Published
4G88
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Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii
分子名称: 2,6-DIAMINOPIMELIC ACID, Outer membrane protein Omp38, S,R MESO-TARTARIC ACID
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-22
公開日2013-07-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
to be published
4G4Z
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BU of 4g4z by Molmil
Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii
分子名称: D-ALANINE, Outer membrane protein Omp38, SULFATE ION
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-16
公開日2013-07-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
To be Published

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件を2024-06-12に公開中

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