6BTX
| Structure of a bacterial metal transporter | Descriptor: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CALCIUM ION, NICKEL (II) ION, ... | Authors: | Jormakka, M, Deshpande, C.N. | Deposit date: | 2017-12-08 | Release date: | 2018-09-19 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | Calcium is an essential cofactor for metal efflux by the ferroportin transporter family. Nat Commun, 9, 2018
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1R27
| Crystal Structure of NarGH complex | Descriptor: | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ... | Authors: | Jormakka, M, Richardson, D, Byrne, B, Iwata, S. | Deposit date: | 2003-09-26 | Release date: | 2004-02-17 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Architecture of NarGH reveals a structural classification of Mo-bisMGD enzymes Structure, 12, 2004
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1KQF
| FORMATE DEHYDROGENASE N FROM E. COLI | Descriptor: | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CARDIOLIPIN, FORMATE DEHYDROGENASE, ... | Authors: | Jormakka, M, Tornroth, S, Byrne, B, Iwata, S. | Deposit date: | 2002-01-05 | Release date: | 2002-03-15 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Molecular basis of proton motive force generation: structure of formate dehydrogenase-N. Science, 295, 2002
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1KQG
| FORMATE DEHYDROGENASE N FROM E. COLI | Descriptor: | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, 2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE, CARDIOLIPIN, ... | Authors: | Jormakka, M, Tornroth, S, Byrne, B, Iwata, S. | Deposit date: | 2002-01-05 | Release date: | 2002-03-15 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Molecular basis of proton motive force generation: structure of formate dehydrogenase-N. Science, 295, 2002
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4Q5I
| Crystal structure of a T151A mutant of the E. coli FeoB G-domain | Descriptor: | Ferrous iron transport protein B, SULFATE ION | Authors: | Jormakka, M, Guilfoyle, A.P, Deshpande, C.N, Maher, M. | Deposit date: | 2014-04-17 | Release date: | 2015-04-08 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Exploring the correlation between the sequence composition of the nucleotide binding G5 loop of the FeoB GTPase domain (NFeoB) and intrinsic rate of GDP release. Biosci.Rep., 34, 2014
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2VPX
| Polysulfide reductase with bound quinone (UQ1) | Descriptor: | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, HYPOTHETICAL MEMBRANE SPANNING PROTEIN, IRON/SULFUR CLUSTER, ... | Authors: | Jormakka, M, Yokoyama, K, Yano, T, Tamakoshi, M, Akimoto, S, Shimamura, T, Curmi, P, Iwata, S. | Deposit date: | 2008-03-09 | Release date: | 2008-06-10 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Molecular Mechanism of Energy Conservation in Polysulfide Respiration. Nat.Struct.Mol.Biol., 15, 2008
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2VPY
| Polysulfide reductase with bound quinone inhibitor, pentachlorophenol (PCP) | Descriptor: | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, HYPOTHETICAL MEMBRANE SPANNING PROTEIN, IRON/SULFUR CLUSTER, ... | Authors: | Jormakka, M, Yokoyama, K, Yano, T, Tamakoshi, M, Akimoto, S, Shimamura, T, Curmi, P, Iwata, S. | Deposit date: | 2008-03-09 | Release date: | 2008-06-10 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Molecular Mechanism of Energy Conservation in Polysulfide Respiration. Nat.Struct.Mol.Biol., 15, 2008
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2VPW
| Polysulfide reductase with bound menaquinone | Descriptor: | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, HYPOTHETICAL MEMBRANE SPANNING PROTEIN, IRON/SULFUR CLUSTER, ... | Authors: | Jormakka, M, Yokoyama, K, Yano, T, Tamakoshi, M, Akimoto, S, Shimamura, T, Curmi, P, Iwata, S. | Deposit date: | 2008-03-09 | Release date: | 2008-06-10 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Molecular Mechanism of Energy Conservation in Polysulfide Respiration. Nat.Struct.Mol.Biol., 15, 2008
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4Q00
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2VPZ
| Polysulfide reductase native structure | Descriptor: | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, HYPOTHETICAL MEMBRANE SPANNING PROTEIN, IRON/SULFUR CLUSTER, ... | Authors: | Jormakka, M, Yokoyama, K, Yano, T, Tamakoshi, M, Akimoto, S, Shimamura, T, Curmi, P, Iwata, S. | Deposit date: | 2008-03-09 | Release date: | 2008-06-10 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Molecular Mechanism of Energy Conservation in Polysulfide Respiration Nat.Struct.Mol.Biol., 15, 2008
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4NON
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5AYN
| Crystal structure of a bacterial homologue of iron transporter ferroportin in outward-facing state | Descriptor: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, POTASSIUM ION, Solute carrier family 39 (Iron-regulated transporter) | Authors: | Taniguchi, R, Kato, H.E, Font, J, Deshpande, C.N, Ishitani, R, Jormakka, M, Nureki, O. | Deposit date: | 2015-08-25 | Release date: | 2015-11-04 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.202 Å) | Cite: | Outward- and inward-facing structures of a putative bacterial transition-metal transporter with homology to ferroportin Nat Commun, 6, 2015
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5AYO
| Crystal structure of a bacterial homologue of iron transporter ferroportin in inward-facing state | Descriptor: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, POTASSIUM ION, Solute carrier family 39 (Iron-regulated transporter), ... | Authors: | Taniguchi, R, Kato, H.E, Font, J, Deshpande, C.N, Ishitani, R, Jormakka, M, Nureki, O. | Deposit date: | 2015-08-25 | Release date: | 2015-11-04 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | Outward- and inward-facing structures of a putative bacterial transition-metal transporter with homology to ferroportin Nat Commun, 6, 2015
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5AYM
| Crystal structure of a bacterial homologue of iron transporter ferroportin in outward-facing state with soaked iron | Descriptor: | FE (II) ION, Solute carrier family 39 (Iron-regulated transporter) | Authors: | Taniguchi, R, Kato, H.E, Font, J, Deshpande, C.N, Ishitani, R, Jormakka, M, Nureki, O. | Deposit date: | 2015-08-25 | Release date: | 2015-11-04 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Outward- and inward-facing structures of a putative bacterial transition-metal transporter with homology to ferroportin Nat Commun, 6, 2015
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3TAH
| Crystal structure of an S. thermophilus NFeoB N11A mutant bound to mGDP | Descriptor: | 3'-O-(N-methylanthraniloyl)guanosine-5'-diphosphate, Ferrous iron uptake transporter protein B, GLYCEROL, ... | Authors: | Ash, M.R, Maher, M.J, Guss, J.M, Jormakka, M. | Deposit date: | 2011-08-04 | Release date: | 2011-12-14 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | The structure of an N11A mutant of the G-protein domain of FeoB Acta Crystallogr.,Sect.F, 67, 2011
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3SS8
| Crystal structure of NFeoB from S. thermophilus bound to GDP.AlF4- and K+ | Descriptor: | Ferrous iron uptake transporter protein B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Ash, M.R, Maher, M.J, Guss, J.M, Jormakka, M. | Deposit date: | 2011-07-08 | Release date: | 2011-08-24 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.51 Å) | Cite: | The initiation of GTP hydrolysis by the G-domain of FeoB: insights from a transition-state complex structure Plos One, 6, 2011
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3HYR
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3HYT
| Structural Basis of GDP Release and Gating in G Protein Coupled Fe2+ Transport | Descriptor: | 2-amino-9-(5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-3-O-{[2-(methylamino)phenyl]carbonyl}-beta-D-erythro-pentofuranosyl-2-ulose)-1,9-dihydro-6H-purin-6-one, Ferrous iron transport protein B, MAGNESIUM ION | Authors: | Maher, M.J, Jormakka, M. | Deposit date: | 2009-06-23 | Release date: | 2009-08-25 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.74 Å) | Cite: | Structural basis of GDP release and gating in G protein coupled Fe(2+) transport. Embo J., 2009
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3W5J
| Crystal structure of GDP-bound NfeoB from Gallionella capsiferriformans | Descriptor: | Ferrous iron transport protein B, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ... | Authors: | Deshpande, C.N, McGrath, A.P, Jormakka, M. | Deposit date: | 2013-01-30 | Release date: | 2013-04-24 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.932 Å) | Cite: | Structure of an atypical FeoB G-domain reveals a putative domain-swapped dimer. Acta Crystallogr.,Sect.F, 69, 2013
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3W5I
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4R98
| Chimera of the N-terminal domain of E. coli FeoB | Descriptor: | AMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ferrous iron transport protein B | Authors: | Maher, M.J, Jormakka, M. | Deposit date: | 2014-09-03 | Release date: | 2015-02-11 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.22 Å) | Cite: | A GTPase Chimera Illustrates an Uncoupled Nucleotide Affinity and Release Rate, Providing Insight into the Activation Mechanism. Biophys.J., 107, 2014
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3LX5
| Crystal structure of mGMPPNP-bound NFeoB from S. thermophilus | Descriptor: | 2-amino-9-(5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-3-O-{[2-(methylamino)phenyl]carbonyl}-beta-D-erythro-pentofuranosyl-2-ulose)-1,9-dihydro-6H-purin-6-one, Ferrous iron uptake transporter protein B, GLYCEROL, ... | Authors: | Ash, M.R, Guilfoyle, A, Maher, M.J, Clarke, R.J, Guss, J.M, Jormakka, M. | Deposit date: | 2010-02-24 | Release date: | 2010-03-09 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Potassium-activated GTPase reaction in the G Protein-coupled ferrous iron transporter B. J.Biol.Chem., 285, 2010
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3LX8
| Crystal structure of GDP-bound NFeoB from S. thermophilus | Descriptor: | Ferrous iron uptake transporter protein B, GUANOSINE-5'-DIPHOSPHATE | Authors: | Ash, M.R, Guilfoyle, A, Maher, M.J, Clarke, R.J, Guss, J.M, Jormakka, M. | Deposit date: | 2010-02-24 | Release date: | 2010-03-09 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Potassium-activated GTPase reaction in the G Protein-coupled ferrous iron transporter B. J.Biol.Chem., 285, 2010
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3B1V
| Crystal structure of an S. thermophilus NFeoB E67A mutant bound to mGMPPNP | Descriptor: | 3'-O-(N-methylanthraniloyl)-beta:gamma-imidoguanosine-5'-triphosphate, CHLORIDE ION, Ferrous iron uptake transporter protein B, ... | Authors: | Ash, M.R, Maher, M.J, Guss, J.M, Jormakka, M. | Deposit date: | 2011-07-15 | Release date: | 2011-11-02 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | A suite of Switch I and Switch II mutant structures from the G-protein domain of FeoB Acta Crystallogr.,Sect.D, 67, 2011
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3B1Z
| Crystal structure of an S. thermophilus NFeoB T35S mutant without nucleotide | Descriptor: | Ferrous iron uptake transporter protein B, SULFATE ION | Authors: | Ash, M.R, Maher, M.J, Guss, J.M, Jormakka, M. | Deposit date: | 2011-07-15 | Release date: | 2011-11-02 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.65 Å) | Cite: | A suite of Switch I and Switch II mutant structures from the G-protein domain of FeoB Acta Crystallogr.,Sect.D, 67, 2011
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