Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 77 件

6ELQ
DownloadVisualize
BU of 6elq by Molmil
Carbon Monoxide Dehydrogenase IV from Carboxydothermus hydrogenoformans
分子名称: Carbon Monoxide Dehydrogenase, FE(4)-NI(1)-S(5) CLUSTER with Oxygen, IRON/SULFUR CLUSTER
著者Domnik, L, Goetzl, S, Jeoung, J.H, Dobbek, H.
登録日2017-09-29
公開日2018-01-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献CODH-IV: A High-Efficiency CO-Scavenging CO Dehydrogenase with Resistance to O2.
Angew. Chem. Int. Ed. Engl., 56, 2017
5FLE
DownloadVisualize
BU of 5fle by Molmil
High resolution NI,FE-CODH-320 mV with CN state
分子名称: CARBON MONOXIDE DEHYDROGENASE 2, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Ciaccafava, A, Tombolelli, D, Domnik, L, Fesseler, J, Jeoung, J.-H, Dobbek, H, Mroginski, M.A, Hildebrandt, P, Zebger, I.
登録日2015-10-26
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献When the inhibitor tells more than the substrate: the cyanide-bound state of a carbon monoxide dehydrogenase.
Chem Sci, 7, 2016
3ZYY
DownloadVisualize
BU of 3zyy by Molmil
Reductive activator for corrinoid,iron-sulfur protein
分子名称: (R,R)-2,3-BUTANEDIOL, FE2/S2 (INORGANIC) CLUSTER, IRON-SULFUR CLUSTER BINDING PROTEIN, ...
著者Hennig, S.E, Jeoung, J.-H, Goetzl, S, Dobbek, H.
登録日2011-08-30
公開日2012-04-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Redox-Dependent Complex Formation by an ATP-Dependent Activator of the Corrinoid/Iron-Sulfur Protein.
Proc.Natl.Acad.Sci.USA, 109, 2012
8OMY
DownloadVisualize
BU of 8omy by Molmil
NI,FE-CODH -600mV state : 35 min Dioxygen Exposure
分子名称: Carbon monoxide dehydrogenase 2, FE (II) ION, FE (III) ION, ...
著者Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日2023-03-31
公開日2023-12-06
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8ON2
DownloadVisualize
BU of 8on2 by Molmil
NI,FE-CODH -600mV state : 24 h Dioxygen Exposure
分子名称: Carbon monoxide dehydrogenase 2, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日2023-03-31
公開日2023-12-06
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8ON0
DownloadVisualize
BU of 8on0 by Molmil
NI,FE-CODH -600mV state : 90 min Dioxygen Exposure
分子名称: Carbon monoxide dehydrogenase 2, FE (II) ION, FE (III) ION, ...
著者Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日2023-03-31
公開日2023-12-06
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8ON1
DownloadVisualize
BU of 8on1 by Molmil
NI,FE-CODH -600mV state : 4 h Dioxygen Exposure
分子名称: Carbon monoxide dehydrogenase 2, FE (II) ION, FE (III) ION, ...
著者Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日2023-03-31
公開日2023-12-06
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
4EMI
DownloadVisualize
BU of 4emi by Molmil
Toluene dioxygenase reductase in reduced state in complex with NAD+
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TodA
著者Lin, T.Y, Werther, T, Jeoung, J.H, Dobbek, H.
登録日2012-04-12
公開日2012-09-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.806 Å)
主引用文献Suppression of Electron Transfer to Dioxygen by Charge Transfer and Electron Transfer Complexes in the FAD-dependent Reductase Component of Toluene Dioxygenase.
J.Biol.Chem., 287, 2012
4EMJ
DownloadVisualize
BU of 4emj by Molmil
Complex between the reductase and ferredoxin components of toluene dioxygenase
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, TodA, ...
著者Lin, T.Y, Werther, T, Jeoung, J.H, Dobbek, H.
登録日2012-04-12
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Suppression of Electron Transfer to Dioxygen by Charge Transfer and Electron Transfer Complexes in the FAD-dependent Reductase Component of Toluene Dioxygenase.
J.Biol.Chem., 287, 2012
4C1N
DownloadVisualize
BU of 4c1n by Molmil
Corrinoid protein reactivation complex with activator
分子名称: CARBON MONOXIDE DEHYDROGENASE CORRINOID/IRON-SULFUR PROTEIN, GAMMA SUBUNIT, CO DEHYDROGENASE/ACETYL-COA SYNTHASE, ...
著者Hennig, S.E, Goetzl, S, Jeoung, J.H, Bommer, M, Lendzian, F, Hildebrandt, P, Dobbek, H.
登録日2013-08-13
公開日2014-08-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献ATP-Induced Electron Transfer by Redox-Selective Partner Recognition
Nat.Commun., 5, 2014
7ZX6
DownloadVisualize
BU of 7zx6 by Molmil
I567L Mutant of Recombinant CODH-II
分子名称: Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
著者Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日2022-05-20
公開日2023-03-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.447 Å)
主引用文献Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
7ZXL
DownloadVisualize
BU of 7zxl by Molmil
H93A Mutant of Recombinant CODH-II
分子名称: Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
著者Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日2022-05-21
公開日2023-03-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
2YCL
DownloadVisualize
BU of 2ycl by Molmil
complete structure of the corrinoid,iron-sulfur protein including the N-terminal domain with a 4Fe-4S cluster
分子名称: CARBON MONOXIDE DEHYDROGENASE CORRINOID/IRON-SULFUR PROTEIN, GAMMA SUBUNIT, CO DEHYDROGENASE/ACETYL-COA SYNTHASE, ...
著者Goetzl, S, Jeoung, J.H, Hennig, S.E, Dobbek, H.
登録日2011-03-16
公開日2011-06-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural Basis for Electron and Methyl-Group Transfer in a Methyltransferase System Operating in the Reductive Acetyl-Coa Pathway
J.Mol.Biol., 411, 2011
2YCI
DownloadVisualize
BU of 2yci by Molmil
methyltransferase native
分子名称: 5-METHYLTETRAHYDROFOLATE CORRINOID/IRON SULFUR PROTEIN METHYLTRANSFERASE, SULFATE ION
著者Goetzl, S, Jeoung, J.H, Hennig, S.E, Dobbek, H.
登録日2011-03-16
公開日2011-06-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structural Basis for Electron and Methyl-Group Transfer in a Methyltransferase System Operating in the Reductive Acetyl-Coa Pathway
J.Mol.Biol., 411, 2011
2YCK
DownloadVisualize
BU of 2yck by Molmil
methyltransferase bound with tetrahydrofolate
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, 5-METHYLTETRAHYDROFOLATE CORRINOID/IRON SULFUR PROTEIN METHYLTRANSFERASE, GLYCEROL, ...
著者Goetzl, S, Jeoung, J.-H, Hennig, S.E, Dobbek, H.
登録日2011-03-16
公開日2011-06-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Basis for Electron and Methyl-Group Transfer in a Methyltransferase System Operating in the Reductive Acetyl-Coa Pathway
J.Mol.Biol., 411, 2011
2YCJ
DownloadVisualize
BU of 2ycj by Molmil
methyltransferase bound with methyltetrahydrofolate
分子名称: 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, 5-METHYLTETRAHYDROFOLATE CORRINOID/IRON SULFUR PROTEIN METHYLTRANSFERASE, GLYCEROL, ...
著者Goetzl, S, Jeoung, J.-H, Hennig, S.E, Dobbek, H.
登録日2011-03-16
公開日2011-06-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural Basis for Electron and Methyl-Group Transfer in a Methyltransferase System Operating in the Reductive Acetyl-Coa Pathway
J.Mol.Biol., 411, 2011
8CJB
DownloadVisualize
BU of 8cjb by Molmil
A268M variant of the CODH/ACS complex of C. hydrogenoformans
分子名称: ACETATE ION, CO-methylating acetyl-CoA synthase, Carbon monoxide dehydrogenase, ...
著者Ruickoldt, J, Jeoung, J, Lennartz, F, Dobbek, H.
登録日2023-02-13
公開日2024-02-21
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Coupling CO 2 Reduction and Acetyl-CoA Formation: The Role of a CO Capturing Tunnel in Enzymatic Catalysis.
Angew.Chem.Int.Ed.Engl., 63, 2024
7ZX3
DownloadVisualize
BU of 7zx3 by Molmil
C295D Mutant of Recombinant CODH-II
分子名称: Carbon monoxide dehydrogenase 2, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
著者Basak, Y, Jeoung, J.H, Dobbek, H.
登録日2022-05-20
公開日2023-03-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.683 Å)
主引用文献Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
7ZXJ
DownloadVisualize
BU of 7zxj by Molmil
K563A Mutant of Recombinant CODH-II
分子名称: Carbon monoxide dehydrogenase 2, DI(HYDROXYETHYL)ETHER, FE (II) ION, ...
著者Basak, Y, Jeoung, J.H, Dobbek, H.
登録日2022-05-21
公開日2023-03-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.249 Å)
主引用文献Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
7ZXX
DownloadVisualize
BU of 7zxx by Molmil
K563H Mutant of Recombinant CODH-II
分子名称: Carbon monoxide dehydrogenase 2, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
著者Basak, Y, Jeoung, J.H, Dobbek, H.
登録日2022-05-23
公開日2023-03-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
7ZY1
DownloadVisualize
BU of 7zy1 by Molmil
I567A Mutant of Recombinant CODH-II
分子名称: Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
著者Basak, Y, Jeoung, J.H, Dobbek, H.
登録日2022-05-23
公開日2023-03-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.434 Å)
主引用文献Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
7ZXC
DownloadVisualize
BU of 7zxc by Molmil
H96D Mutant of Recombinant CODH-II
分子名称: Carbon monoxide dehydrogenase 2, FE (III) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
著者Basak, Y, Jeoung, J.H, Dobbek, H.
登録日2022-05-20
公開日2023-03-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.696 Å)
主引用文献Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
7ZX5
DownloadVisualize
BU of 7zx5 by Molmil
I567T Mutant of Recombinant CODH-II
分子名称: Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
著者Basak, Y, Jeoung, J.H, Dobbek, H.
登録日2022-05-20
公開日2023-03-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.544 Å)
主引用文献Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
7O0D
DownloadVisualize
BU of 7o0d by Molmil
monomeric acetyl-CoA synthase in open conformation with methanethiol moiety of CoA bound to nickel proximal
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CO-methylating acetyl-CoA synthase, ...
著者Kreibich, J, Jeoung, J.H, Dobbek, H.
登録日2021-03-26
公開日2022-04-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ligand binding at the Ni,Ni-[4Fe-4S] cluster of acetyl-CoA synthase
To Be Published
7NYS
DownloadVisualize
BU of 7nys by Molmil
monomeric acetyl-CoA synthase in closed conformation with carbon monoxide bound to the Ni proximal of cluster A
分子名称: $l^{3}-oxidanylidynemethylnickel, 2-[3,8,8,12,12-pentakis(2-hydroxy-2-oxoethyl)-2,7,11-tris(oxidanylidene)-1,4,6,9,10,13-hexaoxa-5$l^{6}-titanaspiro[4.4^{5}.4^{5}]tridecan-3-yl]ethanoic acid, CHLORIDE ION, ...
著者Kreibich, J, Jeoung, J.H, Dobbek, H.
登録日2021-03-23
公開日2022-04-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ligand binding at the Ni,Ni-[4Fe-4S] cluster of acetyl-CoA synthase
To Be Published

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon