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PDB: 20 件
5X49
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Crystal Structure of Human mitochondrial X-prolyl Aminopeptidase (XPNPEP3)
分子名称: (2S,3R)-3-amino-2-hydroxy-4-phenylbutanoic acid, 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, ...
著者Singh, R, Kumar, A, Ghosh, B, Jamdar, S, Makde, R.D.
登録日2017-02-10
公開日2017-05-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of the human aminopeptidase XPNPEP3 and comparison of its in vitro activity with Icp55 orthologs: Insights into diverse cellular processes.
J. Biol. Chem., 292, 2017
4R60
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Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris
分子名称: MANGANESE (II) ION, PHOSPHATE ION, Proline dipeptidase, ...
著者Kumar, A, Ghosh, B, Are, V.N, Jamdar, S.N, Makde, R.D, Sharma, S.M.
登録日2014-08-22
公開日2014-09-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris
to be published
8J9C
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Crystal structure of M61 peptidase (apo-form) from Xanthomonas campestris
分子名称: GLYCEROL, Putative glycyl aminopeptidase, SODIUM ION, ...
著者Yadav, P, Kumar, A, Jamdar, S.N, Makde, R.D.
登録日2023-05-03
公開日2024-05-01
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a newly identified M61 family aminopeptidase with broad substrate specificity that is solely responsible for recycling acidic amino acids.
Febs J., 291, 2024
8J9D
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Crystal structure of M61 peptidase (bestatin-bound) from Xanthomonas campestris
分子名称: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
著者Yadav, P, Kumar, A, Kulkarni, B.S, Jamdar, S.N, Makde, R.D.
登録日2023-05-03
公開日2024-05-01
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a newly identified M61 family aminopeptidase with broad substrate specificity that is solely responsible for recycling acidic amino acids.
Febs J., 291, 2024
8JCR
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Crystal structure of Procerain from Calotropis gigantea (pH 6.0)
分子名称: BETA-MERCAPTOETHANOL, GLYCEROL, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, ...
著者Kumar, A, Jamdar, S.N, Srivastava, G, Makde, R.D.
登録日2023-05-11
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of Procerain from Calotropis gigantea
To Be Published
8JCS
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Crystal structure of Procerain-B from Calotropis gigantea
分子名称: Procerain B
著者Kumar, A, Jamdar, S.N, Srivastava, G, Makde, R.D.
登録日2023-05-11
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of Procerain-B from Calotropis gigantea
To Be Published
8JCQ
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Crystal structure of Procerain from Calotropis gigantea
分子名称: BETA-MERCAPTOETHANOL, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, Procerain
著者Kumar, A, Jamdar, S.N, Srivastava, G, Makde, R.D.
登録日2023-05-11
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of Procerain from Calotropis gigantea
To Be Published
5GIU
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BU of 5giu by Molmil
Crystal structure of Xaa-Pro peptidase from Deinococcus radiodurans, metal-free active site
分子名称: PHOSPHATE ION, Proline dipeptidase, SODIUM ION
著者Are, V.N, Kumar, A, Singh, R, Ghosh, B, Jamdar, S.N, Makde, R.D.
登録日2016-06-25
公開日2017-06-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Xaa-Pro peptidase from Deinococcus radiodurans, metal-free active site
To Be Published
5CDV
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BU of 5cdv by Molmil
Proline dipeptidase from Deinococcus radiodurans R1
分子名称: MANGANESE (II) ION, PHOSPHATE ION, Proline dipeptidase, ...
著者Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.
登録日2015-07-05
公開日2016-08-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Proline dipeptidase from Deinococcus radiodurans R1 at 1.45 Angstrom resolution
To Be Published
5CDL
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Proline dipeptidase from Deinococcus radiodurans (selenomethionine derivative)
分子名称: MANGANESE (II) ION, PHOSPHATE ION, Proline dipeptidase
著者Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.
登録日2015-07-04
公開日2016-08-10
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Proline dipeptidase from Deinococcus radiodurans (selenomethionine derivative)
To Be Published
5FCF
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Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris, phosphate and Mn bound
分子名称: DI(HYDROXYETHYL)ETHER, GLY-GLY-GLY, GLYCEROL, ...
著者Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.D.
登録日2015-12-15
公開日2016-12-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure and biochemical investigations reveal novel mode of substrate selectivity and illuminate substrate inhibition and allostericity in a subfamily of Xaa-Pro dipeptidases.
Biochim. Biophys. Acta, 1865, 2017
5FCH
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Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris, phosphate and Zn bound
分子名称: DI(HYDROXYETHYL)ETHER, GLY-GLY-GLY, GLYCEROL, ...
著者Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.D.
登録日2015-12-15
公開日2016-12-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure and biochemical investigations reveal novel mode of substrate selectivity and illuminate substrate inhibition and allostericity in a subfamily of Xaa-Pro dipeptidases
Biochim. Biophys. Acta, 1865, 2017
5CNX
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BU of 5cnx by Molmil
Crystal structure of Xaa-Pro aminopeptidase from Escherichia coli K12
分子名称: Aminopeptidase YpdF, CACODYLATE ION, GLYCEROL, ...
著者Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.D.
登録日2015-07-18
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures and activities of widely conserved small prokaryotic aminopeptidases-P clarify classification of M24B peptidases
Proteins, 2018
5CIK
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BU of 5cik by Molmil
Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris in citrate condition
分子名称: CITRIC ACID, GLYCEROL, Proline dipeptidase
著者Kumar, A, Are, V, Ghosh, B, Agrawal, U, Jamdar, S, Makde, R.D.
登録日2015-07-13
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris in citrate condition
To Be Published
5CDE
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BU of 5cde by Molmil
R372A mutant of Xaa-Pro dipeptidase from Xanthomonas campestris
分子名称: Proline dipeptidase, SULFATE ION, ZINC ION
著者Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.
登録日2015-07-03
公開日2016-09-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献R372A mutant of Xaa-Pro dipeptidase from Xanthomonas campestris at 1.85 Angstrom resolution
To Be Published
5YZN
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BU of 5yzn by Molmil
Crystal structure of S9 peptidase (active form) from Deinococcus radiodurans R1
分子名称: Acyl-peptide hydrolase, putative
著者Yadav, P, Jamdar, S.N, Kumar, A, Ghosh, B, Makde, R.D.
登録日2017-12-15
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Carboxypeptidase in prolyl oligopeptidase family: Unique enzyme activation and substrate-screening mechanisms.
J.Biol.Chem., 294, 2019
5YZM
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BU of 5yzm by Molmil
Crystal structure of S9 peptidase (inactive form) from Deinococcus radiodurans R1
分子名称: ACETATE ION, Acyl-peptide hydrolase, putative
著者Yadav, P, Jamdar, S.N, Kumar, A, Ghosh, B, Makde, R.D.
登録日2017-12-15
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Carboxypeptidase in prolyl oligopeptidase family: Unique enzyme activation and substrate-screening mechanisms.
J.Biol.Chem., 294, 2019
5YZO
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BU of 5yzo by Molmil
Crystal structure of S9 peptidase mutant (S514A) from Deinococcus radiodurans R1
分子名称: Acyl-peptide hydrolase, putative, DIMETHYL SULFOXIDE, ...
著者Yadav, P, Jamdar, S.N, Kumar, A, Ghosh, B, Makde, R.D.
登録日2017-12-15
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Carboxypeptidase in prolyl oligopeptidase family: Unique enzyme activation and substrate-screening mechanisms.
J.Biol.Chem., 294, 2019
5GIQ
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BU of 5giq by Molmil
Xaa-Pro peptidase from Deinococcus radiodurans, Zinc bound
分子名称: PHOSPHATE ION, Proline dipeptidase, ZINC ION
著者Are, V.N, Singh, R, Kumar, A, Ghosh, B, Jamdar, S.N, Makde, R.D.
登録日2016-06-24
公開日2017-06-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures and activities of widely conserved small prokaryotic aminopeptidases-P clarify classification of M24B peptidases.
Proteins, 2018
5GIV
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BU of 5giv by Molmil
Crystal structure of M32 carboxypeptidase from Deinococcus radiodurans R1
分子名称: ACETATE ION, Carboxypeptidase 1, ZINC ION
著者Sharma, B, Singh, R, Yadav, P, Ghosh, B, Kumar, A, Jamdar, S.N, Makde, R.D.
登録日2016-06-25
公開日2017-07-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Active site gate of M32 carboxypeptidases illuminated by crystal structure and molecular dynamics simulations
Biochim. Biophys. Acta, 1865, 2017

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件を2024-11-06に公開中

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