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PDB: 45 results

6RIX
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BU of 6rix by Molmil
Crystal structure of MchDnaB-1 intein
Descriptor: CHLORIDE ION, Replicative DNA helicase
Authors:Beyer, H.M, Lountos, G.T, Mikula, M.K, Wlodawer, A, Iwai, H.
Deposit date:2019-04-25
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.655 Å)
Cite:The Convergence of the Hedgehog/Intein Fold in Different Protein Splicing Mechanisms.
Int J Mol Sci, 21, 2020
6RIY
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BU of 6riy by Molmil
Crystal structure of MchDnaB-1 intein (N145AA)
Descriptor: CHLORIDE ION, Replicative DNA helicase
Authors:Beyer, H.M, Lountos, G.T, Mikula, M.K, Wlodawer, A, Iwai, H.
Deposit date:2019-04-25
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:The Convergence of the Hedgehog/Intein Fold in Different Protein Splicing Mechanisms.
Int J Mol Sci, 21, 2020
6RPP
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BU of 6rpp by Molmil
Crystal structure of PabCDC21-1 intein
Descriptor: ACETATE ION, Cell division control protein, DI(HYDROXYETHYL)ETHER
Authors:Mikula, K.M, Beyer, H.M, Iwai, H.
Deposit date:2019-05-14
Release date:2019-08-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of CDC21-1 inteins from hyperthermophilic archaea reveal the selection mechanism for the highly conserved homing endonuclease insertion site.
Extremophiles, 23, 2019
6RPQ
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BU of 6rpq by Molmil
Crystal structure of PhoCDC21-1 intein
Descriptor: Ubiquitin-like protein SMT3,1108aa long hypothetical cell division control protein
Authors:Beyer, H.M, Mikula, K.M, Iwai, H.
Deposit date:2019-05-14
Release date:2019-08-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.654 Å)
Cite:Crystal structures of CDC21-1 inteins from hyperthermophilic archaea reveal the selection mechanism for the highly conserved homing endonuclease insertion site.
Extremophiles, 23, 2019
6QKV
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BU of 6qkv by Molmil
Structure of YibK from P. aeruginosa
Descriptor: GLYCEROL, SULFATE ION, tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Mikula, K.M, Tascon, I, Iwai, H.
Deposit date:2019-01-30
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Tying up the Loose Ends: A Mathematically Knotted Protein.
Front Chem, 9, 2021
6QH8
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BU of 6qh8 by Molmil
Structure of knotted YibK from P. aeruginosa
Descriptor: DI(HYDROXYETHYL)ETHER, SULFATE ION, tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Mikula, K.M, Tascon, I, Iwai, H.
Deposit date:2019-01-16
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Tying up the Loose Ends: A Mathematically Knotted Protein.
Front Chem, 9, 2021
4E2T
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BU of 4e2t by Molmil
Crystal Structures of RadA intein from Pyrococcus horikoshii
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Pho radA intein
Authors:Oeemig, J.S, Zhou, D, Kajander, T, Wlodawer, A, Iwai, H.
Deposit date:2012-03-09
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:NMR and Crystal Structures of the Pyrococcus horikoshii RadA Intein Guide a Strategy for Engineering a Highly Efficient and Promiscuous Intein.
J.Mol.Biol., 421, 2012
5O9J
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BU of 5o9j by Molmil
Crystal structure of transcription factor IIB Mja mini-intein
Descriptor: 1,4-DIETHYLENE DIOXIDE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AMMONIUM ION, ...
Authors:Mikula, K.M, Iwai, H, Zhou, D, Wlodawer, A.
Deposit date:2017-06-19
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for the Persistence of Homing Endonucleases in Transcription Factor IIB Inteins.
J. Mol. Biol., 429, 2017
4O1S
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BU of 4o1s by Molmil
Crystal structure of TvoVMA intein
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SULFATE ION, ...
Authors:Aranko, A.S, Oeemig, J.S, Zhou, D, Kajander, T, Wlodawer, A, Iwai, H.
Deposit date:2013-12-16
Release date:2014-03-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7008 Å)
Cite:Structure-based engineering and comparison of novel split inteins for protein ligation.
Mol Biosyst, 10, 2014
6SOW
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BU of 6sow by Molmil
NMR solution structure of staphylococcal protein A, C domain
Descriptor: Immunoglobulin G binding protein A
Authors:Backlund, S.M, Iwai, H.
Deposit date:2019-08-30
Release date:2020-09-09
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR Structure Determinations of Small Proteins Using only One Fractionally 20% 13 C- and Uniformly 100% 15 N-Labeled Sample.
Molecules, 26, 2021
5LW8
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BU of 5lw8 by Molmil
NMR solution structure of Helicobacter pylori TonB-CTD (residues 194-285)
Descriptor: Protein TonB
Authors:Ciragan, A, Aranko, A.S, Tascon, I, Iwai, H.
Deposit date:2016-09-15
Release date:2016-10-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Salt-inducible Protein Splicing in cis and trans by Inteins from Extremely Halophilic Archaea as a Novel Protein-Engineering Tool.
J.Mol.Biol., 428, 2016
4ORN
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BU of 4orn by Molmil
Blue Fluorescent Protein mKalama1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, SULFATE ION, ...
Authors:Vegh, R.B, Bloch, D.A, Bommarius, A.S, Verkhovsky, M, Pletnev, S, Iwai, H, Bochenkova, A.V, Solntsev, K.M.
Deposit date:2014-02-11
Release date:2015-02-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Hidden photoinduced reactivity of the blue fluorescent protein mKalama1.
Phys Chem Chem Phys, 17, 2015
4O1R
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BU of 4o1r by Molmil
Crystal structure of NpuDnaB intein
Descriptor: CHLORIDE ION, GLYCEROL, Replicative DNA helicase, ...
Authors:Aranko, A.S, Oeemig, J.S, Zhou, D, Kajander, T, Wlodawer, A, Iwai, H.
Deposit date:2013-12-16
Release date:2014-03-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-based engineering and comparison of novel split inteins for protein ligation.
Mol Biosyst, 10, 2014
4E2U
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BU of 4e2u by Molmil
Crystal Structures of RadAmin intein from Pyrococcus horikoshii
Descriptor: Pho radA intein
Authors:Oeemig, J.S, Zhou, D, Kajander, T, Wlodawer, A, Iwai, H.
Deposit date:2012-03-09
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.582 Å)
Cite:NMR and Crystal Structures of the Pyrococcus horikoshii RadA Intein Guide a Strategy for Engineering a Highly Efficient and Promiscuous Intein.
J.Mol.Biol., 421, 2012
2KEQ
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BU of 2keq by Molmil
Solution structure of DnaE intein from Nostoc punctiforme
Descriptor: DNA polymerase III alpha subunit, Nucleic acid binding OB-fold tRNA/helicase-type
Authors:Oeemig, J.S, Aranko, A.S, Djupsj, J.B, Iwai, H.
Deposit date:2009-02-02
Release date:2009-05-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of DnaE intein from Nostoc punctiforme: structural basis for the design of a new split intein suitable for site-specific chemical modification.
Febs Lett., 583, 2009
2LQM
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BU of 2lqm by Molmil
Solution Structures of RadA intein from Pyrococcus horikoshii
Descriptor: Pho radA intein
Authors:Oeemig, J.S, Zhou, D, Kajander, T, Wlodawer, A, Iwai, H.
Deposit date:2012-03-09
Release date:2012-05-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR and Crystal Structures of the Pyrococcus horikoshii RadA Intein Guide a Strategy for Engineering a Highly Efficient and Promiscuous Intein.
J.Mol.Biol., 421, 2012
5N2N
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BU of 5n2n by Molmil
Crystal structure of the receiver domain of the histidine kinase CKI1 from Arabidopsis thaliana complexed with Mg2+ and BeF3-
Descriptor: BERYLLIUM TRIFLUORIDE ION, Histidine kinase CKI1, MAGNESIUM ION
Authors:Otrusinova, O, Demo, G, Padrta, P, Jasenakova, Z, Pekarova, B, Gelova, Z, Szmitkowska, A, Kaderavek, P, Jansen, S, Zachrdla, M, Klumpler, T, Marek, J, Hritz, J, Janda, L, Iwai, H, Wimmerova, M, Hejatko, J, Zidek, L.
Deposit date:2017-02-08
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Conformational dynamics are a key factor in signaling mediated by the receiver domain of a sensor histidine kinase from Arabidopsis thaliana.
J. Biol. Chem., 292, 2017
5O9I
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BU of 5o9i by Molmil
Crystal structure of transcription factor IIB Mvu mini-intein
Descriptor: Transcription initiation factor IIB,Transcription initiation factor IIB
Authors:Mikula, K.M, Iwai, H, Li, M, Wlodawer, A.
Deposit date:2017-06-19
Release date:2017-11-01
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for the Persistence of Homing Endonucleases in Transcription Factor IIB Inteins.
J. Mol. Biol., 429, 2017
4AAJ
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BU of 4aaj by Molmil
Structure of N-(5'-phosphoribosyl)anthranilate isomerase from Pyrococcus furiosus
Descriptor: N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE, SULFATE ION
Authors:Repo, H, Oeemig, J.S, Djupsjobacka, J.B, Iwai, H, Heikinheimo, P.
Deposit date:2011-12-04
Release date:2012-10-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Monomeric Tim-Barrel Structure from Pyrococcus Furiosus is Optimized for Extreme Temperatures
Acta Crystallogr.,Sect.D, 68, 2012
1L4V
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BU of 1l4v by Molmil
SOLUTION STRUCTURE OF SAPECIN
Descriptor: Sapecin
Authors:Hanzawa, H, Iwai, H, Takeuchi, K, Kuzuhara, T, Komano, H, Kohda, D, Inagaki, F, Natori, S, Arata, Y, Shimada, I.
Deposit date:2002-03-06
Release date:2002-03-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:1H nuclear magnetic resonance study of the solution conformation of an antibacterial protein, sapecin.
FEBS Lett., 269, 1990
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