Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 169 件

2VXI
DownloadVisualize
BU of 2vxi by Molmil
The binding of heme and zinc in Escherichia coli Bacterioferritin
分子名称: BACTERIOFERRITIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
著者Willies, S.C, Isupov, M.N, Garman, E.F, Littlechild, J.A.
登録日2008-07-04
公開日2008-11-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献The Binding of Haem and Zinc in the 1.9 A X-Ray Structure of Escherichia Coli Bacterioferritin.
J.Biol.Inorg.Chem., 14, 2009
3SS7
DownloadVisualize
BU of 3ss7 by Molmil
Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.55 A resolution
分子名称: D-serine dehydratase, GLYCEROL, POTASSIUM ION, ...
著者Urusova, D.V, Isupov, M.N, Antonyuk, S.V, Kachalova, G.S, Vagin, A.A, Lebedev, A.A, Bourenkov, G.P, Dauter, Z, Bartunik, H.D, Melik-Adamyan, W.R, Mueller, T.D, Schnackerz, K.D.
登録日2011-07-07
公開日2012-01-18
最終更新日2012-02-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of D-serine dehydratase from Escherichia coli.
Biochim.Biophys.Acta, 1824, 2011
5NFQ
DownloadVisualize
BU of 5nfq by Molmil
Novel epoxide hydrolases belonging to the alpha/beta hydrolases superfamily in metagenomes from hot environments
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, IMIDAZOLE, ...
著者Ferrandi, E.E, De Rose, S.A, Sayer, C, Guazzelli, E, Marchesi, C, Saneei, V, Isupov, M.N, Littlechild, J.A, Monti, D.
登録日2017-03-15
公開日2018-05-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献New Thermophilic alpha / beta Class Epoxide Hydrolases Found in Metagenomes From Hot Environments.
Front Bioeng Biotechnol, 6, 2018
7P7W
DownloadVisualize
BU of 7p7w by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine and ADP
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-20
公開日2022-08-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P7I
DownloadVisualize
BU of 7p7i by Molmil
Native structure of N-acetylglucosamine kinase from Plesiomonas shigelloides
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-19
公開日2022-07-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9P
DownloadVisualize
BU of 7p9p by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine and AMP-PNP inhibitor
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-27
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7PA1
DownloadVisualize
BU of 7pa1 by Molmil
Structure of N-acetylglucosamine kinase from Plesiomonas shigelloides in complex with AMP-PNP in the absence of N-acetylglucoseamine substrate
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-28
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9L
DownloadVisualize
BU of 7p9l by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine-6-phosphate
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-6-O-phosphono-beta-D-glucopyranose, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-27
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9Y
DownloadVisualize
BU of 7p9y by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-28
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
5FIP
DownloadVisualize
BU of 5fip by Molmil
Discovery and characterization of a novel thermostable and highly halotolerant GH5 cellulase from an Icelandic hot spring isolate
分子名称: 1,2-ETHANEDIOL, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, CHLORIDE ION, ...
著者Zarafeta, D, Kissas, D, Sayer, C, Gudbergsdottir, S.R, Ladoukakis, E, Isupov, M.N, Chatziioannou, A, Peng, X, Littlechild, J.A, Skretas, G, Kolisis, F.N.
登録日2015-10-01
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Discovery and Characterization of a Thermostable and Highly Halotolerant Gh5 Cellulase from an Icelandic Hot Spring Isolate.
Plos One, 11, 2016
7PVI
DownloadVisualize
BU of 7pvi by Molmil
dTDP-sugar epimerase
分子名称: CITRATE ANION, SODIUM ION, alpha-D-xylopyranose, ...
著者Cross, A.R, Harmer, N.J, Isupov, M.N.
登録日2021-10-04
公開日2022-04-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.434 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
8B9X
DownloadVisualize
BU of 8b9x by Molmil
Chimeric protein of human UFM1 E3 ligase, UFL1, and DDRGK1
分子名称: CHLORIDE ION, DDRGK domain-containing protein 1,E3 UFM1-protein ligase 1
著者Wiener, R, Isupov, M, banerjee, S.
登録日2022-10-10
公開日2023-10-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.066 Å)
主引用文献Structural study of UFL1-UFC1 interaction uncovers the role of UFL1 N-terminal helix in ufmylation.
Embo Rep., 24, 2023
1UP8
DownloadVisualize
BU of 1up8 by Molmil
Recombinant vanadium-dependent bromoperoxidase from red algae Corallina pilulifera
分子名称: CALCIUM ION, PHOSPHATE ION, VANADIUM-DEPENDENT BROMOPEROXIDASE 1
著者Garcia-Rodriguez, E, Isupov, M, Ohshiro, T, Izumi, Y, Littlechild, J.A.
登録日2003-09-29
公開日2003-09-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Enhancing Effect of Calcium and Vanadium Ions on Thermal Stability of Bromoperoxidase from Corallina Pilulifera.
J.Biol.Inorg.Chem., 10, 2005
7PWB
DownloadVisualize
BU of 7pwb by Molmil
dTDP-sugar epimerase from Coxiella burnetii in complex with dTDP
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, THYMIDINE-5'-DIPHOSPHATE, ...
著者Cross, A.R, Harmer, N.J, Isupov, M.N.
登録日2021-10-06
公開日2022-04-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
7ZCX
DownloadVisualize
BU of 7zcx by Molmil
S-layer protein SlaA from Sulfolobus acidocaldarius at pH 4.0
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-deoxy-6-sulfo-beta-D-glucopyranose, ...
著者Gambelli, L, Isupov, M.N, Daum, B.
登録日2022-03-29
公開日2023-06-14
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the two-component S-layer of the archaeon Sulfolobus acidocaldarius.
Elife, 13, 2024
7NW1
DownloadVisualize
BU of 7nw1 by Molmil
Crystal structure of UFC1 in complex with UBA5
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Manoj Kumar, P, Padala, P, Isupov, M.N, Wiener, R.
登録日2021-03-16
公開日2021-09-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun, 12, 2021
8AN2
DownloadVisualize
BU of 8an2 by Molmil
S-layer protein SlaA from Sulfolobus acidocaldarius at pH 10.0
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-deoxy-6-sulfo-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gambelli, L, Isupov, M.N, Daum, B.
登録日2022-08-04
公開日2023-08-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the two-component S-layer of the archaeon Sulfolobus acidocaldarius.
Elife, 13, 2024
8AN3
DownloadVisualize
BU of 8an3 by Molmil
S-layer protein SlaA from Sulfolobus acidocaldarius at pH 7.0
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-deoxy-6-sulfo-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gambelli, L, Isupov, M.N, Daum, B.
登録日2022-08-04
公開日2023-08-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of the two-component S-layer of the archaeon Sulfolobus acidocaldarius.
Elife, 13, 2024
7PWI
DownloadVisualize
BU of 7pwi by Molmil
Structure of the dTDP-sugar epimerase StrM
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, dTDP-4-keto-rhamnose 3,5-epimerase,dTDP-4-dehydrorhamnose 3,5-epimerase
著者Cross, A.R, Harmer, N.J, Isupov, M.N.
登録日2021-10-06
公開日2022-04-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.326 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
7PWH
DownloadVisualize
BU of 7pwh by Molmil
Structure of the dTDP-sugar epimerase StrM
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, THYMIDINE-5'-DIPHOSPHATE, ...
著者Cross, A.R, Harmer, N.J, Isupov, M.N.
登録日2021-10-06
公開日2022-04-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
2WKW
DownloadVisualize
BU of 2wkw by Molmil
Alcaligenes esterase complexed with product analogue
分子名称: CARBOXYLESTERASE, GLYCEROL, SULFATE ION, ...
著者Bourne, P.C, Isupov, M.N, Littlechild, J.A.
登録日2009-06-18
公開日2009-06-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献The Atomic-Resolution Structure of a Novel Bacterial Esterase.
Structure, 8, 2000
5AII
DownloadVisualize
BU of 5aii by Molmil
Discovery and characterization of thermophilic limonene-1,2-epoxide hydrolases from hot spring metagenomic libraries. CH55-sample-PEG complex
分子名称: 1,2-ETHANEDIOL, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, ...
著者Ferrandi, E, Sayer, C, Isupov, M.N, Annovazzi, C, Marchesi, C, Iacobone, G, Peng, X, Bonch-Osmolovskaya, E, Wohlgemuth, R, Littlechild, J.A, Montia, D.
登録日2015-02-13
公開日2015-06-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Discovery and Characterization of Thermophilic Limonene-1,2-Epoxide Hydrolases from Hot Spring Metagenomic Libraries
FEBS J., 282, 2015
1HL7
DownloadVisualize
BU of 1hl7 by Molmil
Gamma lactamase from an Aureobacterium species in complex with 3a,4,7,7a-tetrahydro-benzo [1,3] dioxol-2-one
分子名称: 3A,4,7,7A-TETRAHYDRO-BENZO [1,3] DIOXOL-2-ONE, GAMMA LACTAMASE
著者Line, K, Isupov, M.N, Littlechild, J.A.
登録日2003-03-14
公開日2004-03-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献The Crystal Structure of a (-)Gamma-Lactamase from an Aureobacterium Species Reveals a Tetrahedral Intermediate in the Active Site
J.Mol.Biol., 338, 2004
1HKH
DownloadVisualize
BU of 1hkh by Molmil
unligated gamma lactamase from an Aureobacterium species
分子名称: GAMMA LACTAMASE, SULFATE ION
著者Line, K, Isupov, M.N, Littlechild, J.A.
登録日2003-03-10
公開日2004-03-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献The crystal structure of a (-) gamma-lactamase from an Aureobacterium species reveals a tetrahedral intermediate in the active site.
J. Mol. Biol., 338, 2004
7NVJ
DownloadVisualize
BU of 7nvj by Molmil
Crystal structure of UFC1 Y110A & F121A
分子名称: GLYCEROL, Ubiquitin-fold modifier-conjugating enzyme 1
著者Manoj Kumar, P, Padala, P, Isupov, M.N, Wiener, R.
登録日2021-03-15
公開日2021-09-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun, 12, 2021

220472

件を2024-05-29に公開中

PDB statisticsPDBj update infoContact PDBjnumon