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PDB: 17801 件

5E81
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Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Demeshkina, N, Khusainov, I, Yusupov, M, Yusupova, G.
登録日2015-10-13
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code.
Nat Commun, 7, 2016
2CZV
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Crystal structure of archeal RNase P protein ph1481p in complex with ph1877p
分子名称: ACETIC ACID, Ribonuclease P protein component 2, Ribonuclease P protein component 3, ...
著者Kawano, S, Kakuta, Y, Nakashima, T, Tanaka, I, Kimura, M.
登録日2005-07-19
公開日2006-06-27
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of protein Ph1481p in complex with protein Ph1877p of archaeal RNase P from Pyrococcus horikoshii OT3: implication of dimer formation of the holoenzyme
J.Mol.Biol., 357, 2006
6S7C
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Crystal structure of CARM1 in complex with inhibitor UM079
分子名称: 1-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(3-azanylpropyl)amino]propyl]guanidine, Histone-arginine methyltransferase CARM1
著者Gunnell, E.A, Muhsen, U, Dowden, J, Dreveny, I.
登録日2019-07-04
公開日2020-03-04
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and biochemical evaluation of bisubstrate inhibitors of protein arginine N-methyltransferases PRMT1 and CARM1 (PRMT4).
Biochem.J., 477, 2020
4B95
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pVHL-EloB-EloB-EloC complex_(2S,4R)-1-(2-chlorophenyl)carbonyl-N-[(4-chlorophenyl)methyl]-4-oxidanyl-pyrrolidine-2-carboxamide bound
分子名称: (2S,4R)-1-(2-chlorophenyl)carbonyl-N-[(4-chlorophenyl)methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, ACETATE ION, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, ...
著者Buckley, D.L, Gustafson, J.L, VanMolle, I, Roth, A.G, SeopTae, H, Gareiss, P.C, Jorgensen, W.L, Ciulli, A, Crews, C.M.
登録日2012-08-31
公開日2012-10-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Small-Molecule Inhibitors of the Interaction between the E3 Ligase Vhl and Hif1Alpha
Angew.Chem.Int.Ed.Engl., 51, 2012
4O0N
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2.4 Angstrom Resolution Crystal Structure of Putative Nucleoside Diphosphate Kinase from Toxoplasma gondii.
分子名称: Nucleoside diphosphate kinase, SULFATE ION
著者Minasov, G, Ruan, J, Ngo, H, Shuvalova, L, Dubrovska, I, Flores, K, Shanmugam, D, Roos, D, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-12-13
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in Toxoplasma gondii .
Front Cell Infect Microbiol, 8, 2018
7BCX
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BU of 7bcx by Molmil
The adduct of NAMI-A with Hen Egg White Lysozyme at 8 hours.
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, IMIDAZOLE, ...
著者Chiniadis, L, Giastas, P, Bratsos, I, Papakyriakou, A.
登録日2020-12-21
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Insights into the Protein Ruthenation Mechanism by Antimetastatic Metallodrugs: High-Resolution X-ray Structures of the Adduct Formed between Hen Egg-White Lysozyme and NAMI-A at Various Time Points.
Inorg.Chem., 60, 2021
7BDM
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The adduct of NAMI-A with Hen Egg White Lysozyme at 98 hours.
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme, ...
著者Chiniadis, L, Giastas, P, Bratsos, I, Papakyriakou, A.
登録日2020-12-22
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Insights into the Protein Ruthenation Mechanism by Antimetastatic Metallodrugs: High-Resolution X-ray Structures of the Adduct Formed between Hen Egg-White Lysozyme and NAMI-A at Various Time Points.
Inorg.Chem., 60, 2021
7BD0
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The adduct of NAMI-A with Hen Egg White Lysozyme at 26 hours.
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, IMIDAZOLE, ...
著者Chiniadis, L, Giastas, P, Bratsos, I, Papakyriakou, A.
登録日2020-12-21
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Insights into the Protein Ruthenation Mechanism by Antimetastatic Metallodrugs: High-Resolution X-ray Structures of the Adduct Formed between Hen Egg-White Lysozyme and NAMI-A at Various Time Points.
Inorg.Chem., 60, 2021
7BCU
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The adduct of NAMI-A with Hen Egg White Lysozyme at 1.5 hours.
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, IMIDAZOLE, ...
著者Chiniadis, L, Giastas, P, Bratsos, I, Papakyriakou, A.
登録日2020-12-21
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Insights into the Protein Ruthenation Mechanism by Antimetastatic Metallodrugs: High-Resolution X-ray Structures of the Adduct Formed between Hen Egg-White Lysozyme and NAMI-A at Various Time Points.
Inorg.Chem., 60, 2021
5EM2
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BU of 5em2 by Molmil
Crystal structure of the Erb1-Ytm1 complex
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Ribosome biogenesis protein ERB1, ...
著者Ahmed, Y.L, Sinning, I.
登録日2015-11-05
公開日2015-12-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Concerted removal of the Erb1-Ytm1 complex in ribosome biogenesis relies on an elaborate interface.
Nucleic Acids Res., 44, 2016
6RF4
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BU of 6rf4 by Molmil
Crystal structure of the potassium-pumping S254A mutant of the light-driven sodium pump KR2 in the pentameric form, pH 8.0
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, RETINAL, ...
著者Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
登録日2019-04-12
公開日2019-04-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6RF3
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Crystal structure of the potassium-pumping G263F mutant of the light-driven sodium pump KR2 in the pentameric form, pH 8.0
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, SODIUM ION, ...
著者Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
登録日2019-04-12
公開日2019-04-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6Y84
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BU of 6y84 by Molmil
SARS-CoV-2 main protease with unliganded active site (2019-nCoV, coronavirus disease 2019, COVID-19)
分子名称: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE
著者Owen, C.D, Lukacik, P, Strain-Damerell, C.M, Douangamath, A, Powell, A.J, Fearon, D, Brandao-Neto, J, Crawshaw, A.D, Aragao, D, Williams, M, Flaig, R, Hall, D.R, McAuley, K.E, Mazzorana, M, Stuart, D.I, von Delft, F, Walsh, M.A.
登録日2020-03-03
公開日2020-03-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献COVID-19 main protease with unliganded active site
To Be Published
5IVW
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BU of 5ivw by Molmil
Human core TFIIH bound to DNA within the PIC
分子名称: General transcription factor IIH subunit 2, General transcription factor IIH subunit 3, General transcription factor IIH subunit 4, ...
著者He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
登録日2016-03-21
公開日2016-05-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
7BIG
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BU of 7big by Molmil
Crystal structure of v13WRAP-T, a 7-bladed designer protein
分子名称: CHLORIDE ION, v13WRAP-T
著者Lee, X.Y, Mylemans, B, Laier, I, Voet, A.R.D.
登録日2021-01-12
公開日2021-09-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and stability of the designer protein WRAP-T and its permutants.
Sci Rep, 11, 2021
6SMK
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BU of 6smk by Molmil
Crystal structure of catalytic domain A109H mutant of prophage-encoded M23 protein EnpA from Enterococcus faecalis.
分子名称: Peptidase_M23 domain-containing protein, ZINC ION
著者Malecki, P.H, Mitkowski, P, Czapinska, H, Sabala, I.
登録日2019-08-22
公開日2020-09-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.997 Å)
主引用文献Structural Characterization of EnpA D,L-Endopeptidase from Enterococcus faecalis Prophage Provides Insights into Substrate Specificity of M23 Peptidases.
Int J Mol Sci, 22, 2021
6ASU
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BU of 6asu by Molmil
Crystal structure of Mycobacterium tuberculosis malate synthase in complex with 4-methyl-phenyldiketoacid
分子名称: (2Z)-2-hydroxy-4-(4-methylphenyl)-4-oxobut-2-enoic acid, MAGNESIUM ION, Malate synthase G, ...
著者Krieger, I.V, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
登録日2017-08-25
公開日2018-08-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.316 Å)
主引用文献Anion-pi Interactions in Computer-Aided Drug Design: Modeling the Inhibition of Malate Synthase by Phenyl-Diketo Acids.
J Chem Inf Model, 58, 2018
5H5T
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BU of 5h5t by Molmil
Crystal structure of the flagellar cap protein FliD D2-D3 domains from Salmonella Typhimurium
分子名称: Flagellar hook-associated protein 2
著者Song, W.S, Cho, S.Y, Hong, H.J, Yoon, S.I.
登録日2016-11-09
公開日2017-02-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Self-Oligomerizing Structure of the Flagellar Cap Protein FliD and Its Implication in Filament Assembly.
J. Mol. Biol., 429, 2017
6RTR
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BU of 6rtr by Molmil
Piperideine-6-carboxylate dehydrogenase from Streptomyces clavuligerus
分子名称: ACETATE ION, GLYCEROL, SULFATE ION, ...
著者Hasse, D, Huelsemann, J, Carlsson, G, Andersson, I.
登録日2019-05-26
公開日2019-12-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure and mechanism of piperideine-6-carboxylate dehydrogenase from Streptomyces clavuligerus.
Acta Crystallogr D Struct Biol, 75, 2019
7XLJ
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BU of 7xlj by Molmil
The crystal structure of ORE1(ANAC092) NAC domain
分子名称: NAC domain-containing protein 92
著者Chun, I.S, Kim, M.S.
登録日2022-04-21
公開日2023-03-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis of DNA binding by the NAC transcription factor ORE1, a master regulator of plant senescence.
Plant Commun., 4, 2023
6AWA
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BU of 6awa by Molmil
1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase from Pseudomonas putida in Complex with FAD and Adenosine-5'-monophosphate.
分子名称: ADENOSINE MONOPHOSPHATE, Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-09-05
公開日2017-10-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase from Pseudomonas putida in Complex with FAD and Adenosine-5'-monophosphate.
To Be Published
7ZNZ
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BU of 7znz by Molmil
Crystal structure of unliganded form of FucOB, a GH95 family alpha-1,2-fucosidase from Akkermansia muciniphila
分子名称: FucOB, a GH95 family alpha-1,2-fucosidase, GLYCEROL
著者Anso, I, Cifuente, J.O, Trastoy, B, Guerin, M.E.
登録日2022-04-23
公開日2023-04-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Turning universal O into rare Bombay type blood.
Nat Commun, 14, 2023
5FWY
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BU of 5fwy by Molmil
Crystal structure of the AMPA receptor GluA2/A3 N-terminal domain heterodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMATE RECEPTOR 2, GLUTAMATE RECEPTOR 3, ...
著者Herguedas, B, Garcia-Nafria, J, Greger, I.H.
登録日2016-02-21
公開日2016-03-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structure and Organization of Heteromeric Ampa-Type Glutamate Receptors.
Science, 352, 2016
7XP3
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BU of 7xp3 by Molmil
DNA complex form of ORESARA1(ANAC092) NAC Domain
分子名称: DNA (5'-D(*AP*GP*TP*TP*AP*CP*GP*TP*AP*CP*GP*GP*CP*AP*CP*AP*CP*GP*TP*AP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*TP*AP*CP*GP*TP*GP*TP*GP*CP*CP*GP*TP*AP*CP*GP*TP*AP*AP*C)-3'), DNA (5'-D(P*CP*AP*CP*AP*CP*GP*TP*AP*AP*C)-3'), ...
著者Chun, I.S, Kim, M.S.
登録日2022-05-03
公開日2023-03-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structural basis of DNA binding by the NAC transcription factor ORE1, a master regulator of plant senescence.
Plant Commun., 4, 2023
7ZO0
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BU of 7zo0 by Molmil
Crystal structure of catalytic inactive unliganded form of FucOB, a GH95 family alpha-1,2-fucosidase from Akkermansia muciniphila
分子名称: GH95 family alpha-1,2-fucosidase, GLYCEROL
著者Anso, I, Cifuente, J.O, Trastoy, B, Guerin, M.E.
登録日2022-04-23
公開日2023-04-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Turning universal O into rare Bombay type blood.
Nat Commun, 14, 2023

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件を2024-08-07に公開中

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