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PDB: 9 results

5DHD
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BU of 5dhd by Molmil
Crystal structure of ChBD2 from Thermococcus kodakarensis KOD1
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Chitinase, SULFATE ION
Authors:Hibi, M, Niwa, S, Takeda, K, Miki, K.
Deposit date:2015-08-30
Release date:2016-02-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystal structures of chitin binding domains of chitinase from Thermococcus kodakarensis KOD1
Febs Lett., 590, 2016
6M2I
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BU of 6m2i by Molmil
Structure of the 2-Aminoisobutyric acid Monooxygenase Hydroxylase
Descriptor: 1,2-ETHANEDIOL, Amidohydrolase, FE (III) ION, ...
Authors:Hibi, M, Mikami, B, Ogawa, J.
Deposit date:2020-02-27
Release date:2021-01-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A three-component monooxygenase from Rhodococcus wratislaviensis may expand industrial applications of bacterial enzymes.
Commun Biol, 4, 2021
6M1W
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BU of 6m1w by Molmil
Structure of the 2-Aminoisobutyric acid Monooxygenase Hydroxylase
Descriptor: Amidohydrolase, CHLORIDE ION, FE (III) ION, ...
Authors:Hibi, M, Mikami, B, Ogawa, J.
Deposit date:2020-02-26
Release date:2021-01-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A three-component monooxygenase from Rhodococcus wratislaviensis may expand industrial applications of bacterial enzymes.
Commun Biol, 4, 2021
7YPD
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BU of 7ypd by Molmil
Discovery and characterization of a new carbonyl reductase from Rhodotorula toluroides reducing fluoroketones, and X-ray analysis of the variant by rational engineering
Descriptor: Carbonyl reductase, MAGNESIUM ION
Authors:Watanabe, Y, Asano, Y, Hibi, M.
Deposit date:2022-08-03
Release date:2024-02-07
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Discovery and characterization of a new carbonyl reductase from Rhodotorula toluroides reducing fluoroketones, and X-ray analysis of the variant by rational engineering
To Be Published
5DHE
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BU of 5dhe by Molmil
Crystal structure of ChBD3 from Thermococcus kodakarensis KOD1
Descriptor: Chitinase, GLYCEROL
Authors:Niwa, S, Hibi, M, Takeda, K, Miki, K.
Deposit date:2015-08-30
Release date:2016-02-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of chitin binding domains of chitinase from Thermococcus kodakarensis KOD1
Febs Lett., 590, 2016
3W20
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BU of 3w20 by Molmil
Crystal Structure of a Novel N-Substituted L-Amino Acid Dioxygenase from Burkholderia ambifaria AMMD
Descriptor: Putative uncharacterized protein, ZINC ION
Authors:Qin, H.M, Miyakawa, T, Jia, M.Z, Nakamura, A, Ohtsuka, J, Xue, Y.L, Kawashima, T, Kasahara, T, Hibi, M, Ogawa, J, Tanokura, M.
Deposit date:2012-11-26
Release date:2013-07-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal Structure of a Novel N-Substituted L-Amino Acid Dioxygenase from Burkholderia ambifaria AMMD
Plos One, 8, 2013
3W21
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BU of 3w21 by Molmil
Crystal Structure of a Novel N-Substituted L-Amino Acid Dioxygenase in complex with alpha-KG from Burkholderia ambifaria AMMD
Descriptor: 2-OXOGLUTARIC ACID, Putative uncharacterized protein, ZINC ION
Authors:Qin, H.M, Miyakawa, T, Jia, M.Z, Nakamura, A, Ohtsuka, J, Xue, Y.L, Kawashima, T, Kasahara, T, Hibi, M, Ogawa, J, Tanokura, M.
Deposit date:2012-11-26
Release date:2013-07-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal Structure of a Novel N-Substituted L-Amino Acid Dioxygenase from Burkholderia ambifaria AMMD
Plos One, 8, 2013
7D6R
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BU of 7d6r by Molmil
Crystal structure of the Stx2a complexed with MMA betaAla peptide
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, MMA betaAla peptide, Shiga toxin 2 B subunit, ...
Authors:Takahashi, M, Tamada, M, Hibino, M, Senda, M, Okuda, A, Miyazawa, A, Senda, T, Nishikawa, K.
Deposit date:2020-10-01
Release date:2021-04-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of a peptide motif that potently inhibits two functionally distinct subunits of Shiga toxin.
Commun Biol, 4, 2021
7D6Q
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BU of 7d6q by Molmil
Crystal structure of the Stx2a
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, Shiga toxin 2 B subunit, rRNA N-glycosylase
Authors:Takahashi, M, Tamada, M, Hibino, M, Senda, M, Okuda, A, Miyazawa, A, Senda, T, Nishikawa, K.
Deposit date:2020-10-01
Release date:2021-04-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of a peptide motif that potently inhibits two functionally distinct subunits of Shiga toxin.
Commun Biol, 4, 2021

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