8JEA
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![BU of 8jea by Molmil](/molmil-images/mine/8jea) | Crystal structure of CGL1 from Crassostrea gigas, mannotriose-bound form (CGL1/Man(alpha)1-2Man(alpha)1-2Man) | Descriptor: | ACETIC ACID, CACODYLATE ION, MAGNESIUM ION, ... | Authors: | Unno, H, Hatakeyama, T. | Deposit date: | 2023-05-15 | Release date: | 2023-10-25 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (0.97 Å) | Cite: | Mannose oligosaccharide recognition of CGL1, a mannose-specific lectin containing DM9 motifs from Crassostrea gigas, revealed by X-ray crystallographic analysis. J.Biochem., 175, 2023
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8JEB
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![BU of 8jeb by Molmil](/molmil-images/mine/8jeb) | Crystal structure of CGL1 from Crassostrea gigas, mannotetraose-bound form (CGL1/Man(alpha)1-2Man(alpha)1-2Man(alpha)1-6Man) | Descriptor: | ACETIC ACID, MAGNESIUM ION, Natterin-3, ... | Authors: | Unno, H, Hatakeyama, T. | Deposit date: | 2023-05-15 | Release date: | 2023-10-25 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Mannose oligosaccharide recognition of CGL1, a mannose-specific lectin containing DM9 motifs from Crassostrea gigas, revealed by X-ray crystallographic analysis. J.Biochem., 175, 2023
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8JE9
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![BU of 8je9 by Molmil](/molmil-images/mine/8je9) | Crystal structure of CGL1 from Crassostrea gigas, mannobiose-bound form (CGL1/Man(alpha)1-2Man) | Descriptor: | ACETIC ACID, CACODYLATE ION, Natterin-3, ... | Authors: | Unno, H, Hatakeyama, T. | Deposit date: | 2023-05-15 | Release date: | 2023-10-25 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1 Å) | Cite: | Mannose oligosaccharide recognition of CGL1, a mannose-specific lectin containing DM9 motifs from Crassostrea gigas, revealed by X-ray crystallographic analysis. J.Biochem., 175, 2023
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5YAE
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![BU of 5yae by Molmil](/molmil-images/mine/5yae) | Ferulic acid esterase from Streptomyces cinnamoneus at 2.4 A resolution | Descriptor: | ACETATE ION, Esterase, SULFATE ION | Authors: | Tamura, H, Uraji, M, Mizohata, E, Ogawa, K, Inoue, T, Hatanaka, T. | Deposit date: | 2017-08-31 | Release date: | 2017-12-06 | Last modified: | 2018-01-31 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Loop of Streptomyces Feruloyl Esterase Plays an Important Role in the Enzyme's Catalyzing the Release of Ferulic Acid from Biomass. Appl. Environ. Microbiol., 84, 2018
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5YAL
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![BU of 5yal by Molmil](/molmil-images/mine/5yal) | Ferulic acid esterase from Streptomyces cinnamoneus at 1.5 A resolution | Descriptor: | ACETATE ION, Esterase, GLYCEROL, ... | Authors: | Tamura, H, Uraji, M, Mizohata, E, Ogawa, K, Inoue, T, Hatanaka, T. | Deposit date: | 2017-09-01 | Release date: | 2017-12-06 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Loop of Streptomyces Feruloyl Esterase Plays an Important Role in the Enzyme's Catalyzing the Release of Ferulic Acid from Biomass. Appl. Environ. Microbiol., 84, 2018
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6M5M
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![BU of 6m5m by Molmil](/molmil-images/mine/6m5m) | SPL-1 - GlcNAc complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, N-acetylglucosamine-specific lectin | Authors: | Unno, H, Hatakeyama, T. | Deposit date: | 2020-03-11 | Release date: | 2020-06-10 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Novel carbohydrate-recognition mode of the invertebrate C-type lectin SPL-1 from Saxidomus purpuratus revealed by the GlcNAc-complex crystal in the presence of Ca2. Acta Crystallogr.,Sect.F, 76, 2020
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5H4S
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![BU of 5h4s by Molmil](/molmil-images/mine/5h4s) | |
2ZWB
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![BU of 2zwb by Molmil](/molmil-images/mine/2zwb) | Neutron crystal structure of wild type human lysozyme in D2O | Descriptor: | Lysozyme C | Authors: | Chiba-Kamoshida, K, Matsui, T, Chatake, T, Ohhara, T, Ostermann, A, Tanaka, I, Yutani, K, Niimura, N. | Deposit date: | 2008-12-02 | Release date: | 2009-12-08 | Last modified: | 2023-11-01 | Method: | NEUTRON DIFFRACTION (1.8 Å) | Cite: | Site-specific softening of peptide bonds by localized deuterium observed by neutron crystallography of human lysozyme To be Published
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1I3T
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![BU of 1i3t by Molmil](/molmil-images/mine/1i3t) | MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATT(MO4)CGCG): THE WATSON-CRICK TYPE AND WOBBLE N4-METHOXYCYTIDINE/GUANOSINE BASE PAIRS IN B-DNA | Descriptor: | 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(C45)P*GP*CP*GP)-3', MAGNESIUM ION | Authors: | Hossain, M.T, Hikima, T, Chatake, T, Masaru, T, Sunami, T, Ueno, Y, Matsuda, A, Takenaka, A. | Deposit date: | 2001-02-16 | Release date: | 2001-09-14 | Last modified: | 2023-08-09 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Crystallographic studies on damaged DNAs: III. N(4)-methoxycytosine can form both Watson-Crick type and wobbled base pairs in a B-form duplex. J.Biochem.(Tokyo), 130, 2001
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4Y7E
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![BU of 4y7e by Molmil](/molmil-images/mine/4y7e) | Crystal structure of beta-mannanase from Streptomyces thermolilacinus with mannohexaose | Descriptor: | CALCIUM ION, Endoglucanase, GLYCEROL, ... | Authors: | Kumagai, Y, Yamashita, K, Okuyama, M, Hatanaka, T, Yao, M, Kimura, A. | Deposit date: | 2015-02-14 | Release date: | 2015-09-23 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | The loop structure of Actinomycete glycoside hydrolase family 5 mannanases governs substrate recognition Febs J., 282, 2015
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1I47
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![BU of 1i47 by Molmil](/molmil-images/mine/1i47) | MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATT(MO4)CGCG): THE WATSON-CRICK TYPE AND WOBBLE N4-METHOXYCYTIDINE/GUANOSINE BASE PAIRS IN B-DNA | Descriptor: | 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(C45)P*GP*CP*GP)-3', MAGNESIUM ION | Authors: | Hossain, M.T, Hikima, T, Chatake, T, Tsunoda, M, Sunami, T, Ueno, Y, Matsuda, A, Takenaka, A. | Deposit date: | 2001-02-20 | Release date: | 2003-02-11 | Last modified: | 2023-08-09 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystallographic studies on damaged DNAs: III. N(4)-methoxycytosine can form both Watson-Crick type and wobbled base pairs in a B-form duplex J.Biochem.(Tokyo), 130, 2001
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1J8L
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![BU of 1j8l by Molmil](/molmil-images/mine/1j8l) | Molecular and Crystal Structure of D(CGCAAATTMO4CGCG): the Watson-Crick Type N4-Methoxycytidine/Adenosine Base Pair in B-DNA | Descriptor: | DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*(C45)P*GP*CP*G)-3'), MAGNESIUM ION | Authors: | Hossain, M.T, Sunami, T, Tsunoda, M, Hikima, T, Chatake, T, Ueno, Y, Matsuda, A, Takenaka, A. | Deposit date: | 2001-05-22 | Release date: | 2001-09-28 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Crystallographic studies on damaged DNAs IV. N(4)-methoxycytosine shows a second face for Watson-Crick base-pairing, leading to purine transition mutagenesis. Nucleic Acids Res., 29, 2001
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1VCL
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![BU of 1vcl by Molmil](/molmil-images/mine/1vcl) | Crystal Structure of Hemolytic Lectin CEL-III | Descriptor: | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ... | Authors: | Uchida, T, Yamasaki, T, Eto, S, Sugawara, H, Kurisu, G, Nakagawa, A, Kusunoki, M, Hatakeyama, T. | Deposit date: | 2004-03-09 | Release date: | 2004-09-07 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal Structure of the Hemolytic Lectin CEL-III Isolated from the Marine Invertebrate Cucumaria echinata: IMPLICATIONS OF DOMAIN STRUCTURE FOR ITS MEMBRANE PORE-FORMATION MECHANISM J.Biol.Chem., 279, 2004
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1WMZ
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![BU of 1wmz by Molmil](/molmil-images/mine/1wmz) | Crystal Structure of C-type Lectin CEL-I complexed with N-acetyl-D-galactosamine | Descriptor: | 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ... | Authors: | Sugawara, H, Kusunoki, M, Kurisu, G, Fujimoto, T, Aoyagi, H, Hatakeyama, T. | Deposit date: | 2004-07-22 | Release date: | 2004-09-07 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis J.Biol.Chem., 279, 2004
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1WMY
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![BU of 1wmy by Molmil](/molmil-images/mine/1wmy) | Crystal Structure of C-type Lectin CEL-I from Cucumaria echinata | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, lectin CEL-I, ... | Authors: | Sugawara, H, Kusunoki, M, Kurisu, G, Fujimoto, T, Aoyagi, H, Hatakeyama, T. | Deposit date: | 2004-07-22 | Release date: | 2004-09-07 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis J.Biol.Chem., 279, 2004
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3AU4
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![BU of 3au4 by Molmil](/molmil-images/mine/3au4) | |
1WN0
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![BU of 1wn0 by Molmil](/molmil-images/mine/1wn0) | Crystal Structure of Histidine-containing Phosphotransfer Protein, ZmHP2, from maize | Descriptor: | histidine-containing phosphotransfer protein | Authors: | Sugawara, H, Kawano, Y, Hatakeyama, T, Yamaya, T, Kamiya, N, Sakakibara, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-07-24 | Release date: | 2005-01-25 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of the histidine-containing phosphotransfer protein ZmHP2 from maize Protein Sci., 14, 2005
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1WQZ
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![BU of 1wqz by Molmil](/molmil-images/mine/1wqz) | Complicated water orientations in the minor groove of B-DNA decamer D(CCATTAATGG)2 observed by neutron diffraction measurements | Descriptor: | 5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3' | Authors: | Arai, S, Chatake, T, Ohhara, T, Kurihara, K, Tanaka, I, Suzuki, N, Fujimoto, Z, Mizuno, H, Niimura, N. | Deposit date: | 2004-10-07 | Release date: | 2005-06-21 | Last modified: | 2023-10-25 | Method: | NEUTRON DIFFRACTION (3 Å) | Cite: | Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements Nucleic Acids Res., 33, 2005
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1WQY
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![BU of 1wqy by Molmil](/molmil-images/mine/1wqy) | X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution | Descriptor: | 5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3' | Authors: | Arai, S, Chatake, T, Ohhara, T, Kurihara, K, Tanaka, I, Suzuki, N, Fujimoto, Z, Mizuno, H, Niimura, N. | Deposit date: | 2004-10-07 | Release date: | 2005-06-21 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements Nucleic Acids Res., 33, 2005
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6A7S
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![BU of 6a7s by Molmil](/molmil-images/mine/6a7s) | Ca2+-independent C-type lectin SPL-2 from Saxidomus purpuratus | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ... | Authors: | Unno, H, Hatakeyama, T. | Deposit date: | 2018-07-04 | Release date: | 2019-03-20 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Novel Ca2+-independent carbohydrate recognition of the C-type lectins, SPL-1 and SPL-2, from the bivalve Saxidomus purpuratus. Protein Sci., 28, 2019
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6A56
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![BU of 6a56 by Molmil](/molmil-images/mine/6a56) | AJLec from the Sea Anemone Anthopleura japonica | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AJLec, CALCIUM ION, ... | Authors: | Unno, H, Hatakeyama, T. | Deposit date: | 2018-06-22 | Release date: | 2018-07-25 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | Identification, Characterization, and X-ray Crystallographic Analysis of a Novel Type of Lectin AJLec from the Sea Anemone Anthopleura japonica. Sci Rep, 8, 2018
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6A7T
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3WSU
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![BU of 3wsu by Molmil](/molmil-images/mine/3wsu) | Crystal structure of beta-mannanase from Streptomyces thermolilacinus | Descriptor: | Beta-mannanase, GLYCEROL, SODIUM ION | Authors: | Kumagai, Y, Yamashita, K, Okuyama, M, Hatanaka, T, Yao, M, Kimura, A. | Deposit date: | 2014-03-26 | Release date: | 2015-05-20 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | The loop structure of Actinomycete glycoside hydrolase family 5 mannanases governs substrate recognition Febs J., 282, 2015
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1VCX
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![BU of 1vcx by Molmil](/molmil-images/mine/1vcx) | Neutron Crystal Structure of the Wild Type Rubredoxin from Pyrococcus Furiosus at 1.5A Resolution | Descriptor: | FE (III) ION, Rubredoxin | Authors: | Kurihara, K, Tanaka, I, Chatake, T, Adams, M.W.W, Jenney Jr, F.E, Moiseeva, N, Bau, R, Niimura, N. | Deposit date: | 2004-03-17 | Release date: | 2004-08-10 | Last modified: | 2023-10-25 | Method: | NEUTRON DIFFRACTION (1.5 Å) | Cite: | Neutron crystallographic study on rubredoxin from Pyrococcus furiosus by BIX-3, a single-crystal diffractometer for biomacromolecules Proc.Natl.Acad.Sci.USA, 101, 2004
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3W9T
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![BU of 3w9t by Molmil](/molmil-images/mine/3w9t) | pore-forming CEL-III | Descriptor: | CALCIUM ION, Hemolytic lectin CEL-III, MAGNESIUM ION, ... | Authors: | Unno, H, Goda, S, Hatakeyama, T. | Deposit date: | 2013-04-16 | Release date: | 2014-03-19 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Hemolytic lectin CEL-III heptamer reveals its transmembrane pore-formation mechanism J.Biol.Chem., 2014
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