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PDB: 40 results

1TJ6
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BU of 1tj6 by Molmil
Crystal structure of the Xenopus tropicalis Spred1 EVH-1 domain
Descriptor: Spred1
Authors:Harmer, N.J, Sivak, J, Amaya, E, Blundell, T.L.
Deposit date:2004-06-03
Release date:2005-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:1.65A Crystal structure of the X. tropicalis Spred1 Enabled/Vasodilator-stimulated phosphoprotein homology-1 domain
To be Published
1XOD
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Crystal structure of X. tropicalis Spred1 EVH-1 domain
Descriptor: GLYCEROL, Spred1
Authors:Harmer, N.J, Sivak, J.M, Amaya, E, Blundell, T.L.
Deposit date:2004-10-06
Release date:2005-01-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:1.15A Crystal structure of the X. tropicalis Spred1 EVH1 domain suggests a fourth distinct peptide-binding mechanism within the EVH1 family
Febs Lett., 579, 2005
1PWA
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BU of 1pwa by Molmil
Crystal structure of Fibroblast Growth Factor 19
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Fibroblast growth factor-19, GLYCEROL, ...
Authors:Harmer, N.J, Pellegrini, L, Chirgadze, D, Fernandez-Recio, J, Blundell, T.L.
Deposit date:2003-07-01
Release date:2004-01-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The crystal structure of fibroblast growth factor (FGF) 19 reveals novel features of the FGF family and offers a structural basis for its unusual receptor affinity.
Biochemistry, 43, 2004
2XBL
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BU of 2xbl by Molmil
Crystal structure of GmhA from Burkholderia pseudomallei in complex with product
Descriptor: 7-O-phosphono-D-glycero-alpha-D-manno-heptopyranose, DI(HYDROXYETHYL)ETHER, PHOSPHOHEPTOSE ISOMERASE, ...
Authors:Harmer, N.J.
Deposit date:2010-04-13
Release date:2010-05-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The Structure of Sedoheptulose-7-Phosphate Isomerase from Burkholderia Pseudomallei Reveals a Zinc Binding Site at the Heart of the Active Site.
J.Mol.Biol., 400, 2010
2X3Y
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BU of 2x3y by Molmil
Crystal structure of GmhA from Burkholderia pseudomallei
Descriptor: PHOSPHOHEPTOSE ISOMERASE, ZINC ION
Authors:Harmer, N.J.
Deposit date:2010-01-28
Release date:2010-05-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Structure of Sedoheptulose-7-Phosphate Isomerase from Burkholderia Pseudomallei Reveals a Zinc Binding Site at the Heart of the Active Site.
J.Mol.Biol., 400, 2010
2Q1T
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BU of 2q1t by Molmil
Crystal structure of the Bordetella bronchiseptica enzyme WbmF in complex with NAD+ and UDP
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative nucleotide sugar epimerase/ dehydratase, URIDINE-5'-DIPHOSPHATE
Authors:Harmer, N.J, King, J.D, Palmer, C.M, Maskell, D, Blundell, T.L.
Deposit date:2007-05-25
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Predicting protein function from structure--the roles of short-chain dehydrogenase/reductase enzymes in Bordetella O-antigen biosynthesis.
J.Mol.Biol., 374, 2007
2PZM
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BU of 2pzm by Molmil
Crystal structure of the Bordetella bronchiseptica enzyme WbmG in complex with NAD and UDP
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative nucleotide sugar epimerase/ dehydratase, SULFATE ION, ...
Authors:Harmer, N.J, King, J.D, Palmer, C.M, Maskell, D, Blundell, T.L.
Deposit date:2007-05-18
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Predicting protein function from structure--the roles of short-chain dehydrogenase/reductase enzymes in Bordetella O-antigen biosynthesis.
J.Mol.Biol., 374, 2007
2Q1U
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BU of 2q1u by Molmil
Crystal structure of the Bordetella bronchiseptica enzyme WbmF in complex with NAD+ and UDP
Descriptor: GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative nucleotide sugar epimerase/ dehydratase, ...
Authors:Harmer, N.J, King, J.D, Palmer, C.M, Maskell, D, Blundell, T.L.
Deposit date:2007-05-25
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Predicting protein function from structure--the roles of short-chain dehydrogenase/reductase enzymes in Bordetella O-antigen biosynthesis.
J.Mol.Biol., 374, 2007
2Q1S
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BU of 2q1s by Molmil
Crystal structure of the Bordetella bronchiseptica enzyme WbmF in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Putative nucleotide sugar epimerase/ dehydratase
Authors:Harmer, N.J, King, J.D, Palmer, C.M, Maskell, D, Blundell, T.L.
Deposit date:2007-05-25
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Predicting protein function from structure--the roles of short-chain dehydrogenase/reductase enzymes in Bordetella O-antigen biosynthesis.
J.Mol.Biol., 374, 2007
2PZJ
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BU of 2pzj by Molmil
Crystal structure of the Bordetella bronchiseptica enzyme WbmF in complex with NAD+
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative nucleotide sugar epimerase/ dehydratase
Authors:Harmer, N.J, King, J.D, Palmer, C.M, Maskell, D, Blundell, T.L.
Deposit date:2007-05-18
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Predicting protein function from structure--the roles of short-chain dehydrogenase/reductase enzymes in Bordetella O-antigen biosynthesis.
J.Mol.Biol., 374, 2007
4USK
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BU of 4usk by Molmil
Unravelling the B. pseudomallei heptokinase WcbL: from Structure to Drug Discovery.
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, PUTATIVE SUGAR KINASE, ...
Authors:Vivoli, M, Isupov, M.N, Nicholas, R, Hill, A, Scott, A, Kosma, P, Prior, J, Harmer, N.J.
Deposit date:2014-07-09
Release date:2016-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Unraveling the B.Pseudomallei Heptokinase Wcbl: From Structure to Drug Discovery.
Chem.Biol., 22, 2015
4USM
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BU of 4usm by Molmil
WcbL complex with glycerol bound to sugar site
Descriptor: CHLORIDE ION, GLYCEROL, PUTATIVE SUGAR KINASE
Authors:Vivoli, M, Isupov, M.N, Nicholas, R, Hill, A, Scott, A, Kosma, P, Prior, J, Harmer, N.J.
Deposit date:2014-07-10
Release date:2016-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Unraveling the B.Pseudomallei Heptokinase Wcbl: From Structure to Drug Discovery.
Chem.Biol., 22, 2015
4UT4
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BU of 4ut4 by Molmil
Burkholderia pseudomallei heptokinase WcbL, D-mannose complex.
Descriptor: CHLORIDE ION, PUTATIVE SUGAR KINASE, alpha-D-mannopyranose
Authors:Vivoli, M, Isupov, M.N, Nicholas, R, Hill, A, Scott, A, Kosma, P, Prior, J, Harmer, N.J.
Deposit date:2014-07-18
Release date:2016-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Unraveling the B.Pseudomallei Heptokinase Wcbl: From Structure to Drug Discovery.
Chem.Biol., 22, 2015
5FRD
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BU of 5frd by Molmil
Structure of a thermophilic esterase
Descriptor: CARBOXYLESTERASE (EST-2), CHLORIDE ION, CITRATE ANION, ...
Authors:Sayer, C, Finnigan, W, Isupov, M.N, Levisson, M, Kengen, S.W.M, van der Oost, J, Harmer, N, Littlechild, J.A.
Deposit date:2015-12-17
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and Biochemical Characterisation of Archaeoglobus Fulgidus Esterase Reveals a Bound Coa Molecule in the Vicinity of the Active Site.
Sci.Rep., 6, 2016
4UTG
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BU of 4utg by Molmil
Burkholderia pseudomallei heptokinase WcbL,AMPPNP (ATP analogue) complex.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Vivoli, M, Isupov, M.N, Nicholas, R, Hill, A, Scott, A, Kosma, P, Prior, J, Harmer, N.J.
Deposit date:2014-07-21
Release date:2016-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Unraveling the B.Pseudomallei Heptokinase Wcbl: From Structure to Drug Discovery.
Chem.Biol., 22, 2015
7PQ9
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BU of 7pq9 by Molmil
Crystal structure of Bacillus clausii pdxR at 2.8 Angstroms resolution
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Vivoli Vega, M, Isupov, M.N, Harmer, N.
Deposit date:2021-09-16
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
7PVI
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BU of 7pvi by Molmil
dTDP-sugar epimerase
Descriptor: CITRATE ANION, SODIUM ION, alpha-D-xylopyranose, ...
Authors:Cross, A.R, Harmer, N.J, Isupov, M.N.
Deposit date:2021-10-04
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.434 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
7PWB
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BU of 7pwb by Molmil
dTDP-sugar epimerase from Coxiella burnetii in complex with dTDP
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, THYMIDINE-5'-DIPHOSPHATE, ...
Authors:Cross, A.R, Harmer, N.J, Isupov, M.N.
Deposit date:2021-10-06
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
7PWH
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BU of 7pwh by Molmil
Structure of the dTDP-sugar epimerase StrM
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, THYMIDINE-5'-DIPHOSPHATE, ...
Authors:Cross, A.R, Harmer, N.J, Isupov, M.N.
Deposit date:2021-10-06
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
7PWI
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BU of 7pwi by Molmil
Structure of the dTDP-sugar epimerase StrM
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, dTDP-4-keto-rhamnose 3,5-epimerase,dTDP-4-dehydrorhamnose 3,5-epimerase
Authors:Cross, A.R, Harmer, N.J, Isupov, M.N.
Deposit date:2021-10-06
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.326 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
2Y78
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BU of 2y78 by Molmil
Crystal structure of BPSS1823, a Mip-like chaperone from Burkholderia pseudomallei
Descriptor: CHLORIDE ION, GLYCEROL, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE, ...
Authors:Norville, I.H, O'Shea, K, Sarkar-Tyson, M, Harmer, N.J.
Deposit date:2011-01-28
Release date:2011-05-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.91 Å)
Cite:The Structure of a Burkholderia Pseudomallei Immunophilin-Inhibitor Complex Reveals New Approaches to Antimicrobial Development
Biochem.J., 437, 2011
4BQO
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BU of 4bqo by Molmil
Structural insights into WcbI, a novel polysaccharide biosynthesis enzyme. Native protein without disulfide bond between COA and Cys14.
Descriptor: BROMIDE ION, COENZYME A, DI(HYDROXYETHYL)ETHER, ...
Authors:Vivoli, M, Ayres, E, Isupov, M.N, Harmer, N.J.
Deposit date:2013-05-31
Release date:2013-11-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural Insights Into Wcbi, a Novel Polysaccharide-Biosynthesis Enzyme.
Iucrj, 1, 2014
4BQN
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BU of 4bqn by Molmil
Structural insights into WcbI, a novel polysaccharide biosynthesis enzyme. Native protein.
Descriptor: CAPSULAR POLYSACCHARIDE BIOSYNTHESIS PROTEIN, CHLORIDE ION, COENZYME A, ...
Authors:Vivoli, M, Ayres, E, Isupov, M.N, Harmer, N.J.
Deposit date:2013-05-31
Release date:2013-11-06
Last modified:2014-08-13
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Structural Insights Into Wcbi, a Novel Polysaccharide-Biosynthesis Enzyme.
Iucrj, 1, 2014
4C26
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BU of 4c26 by Molmil
Solution NMR structure of the HicA toxin from Burkholderia pseudomallei
Descriptor: HICA
Authors:Butt, A, Higman, V.A, Williams, C, Crump, M.P, Hemsley, C, Harmer, N, Titball, R.W.
Deposit date:2013-08-16
Release date:2014-04-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Hica Toxin from Burkholderia Pseudomallei Has a Role in Persister Cell Formation.
Biochem.J., 459, 2014
6HNK
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The ligand-free, open structure of CD0873, a substrate binding protein with adhesive properties from Clostridium difficile.
Descriptor: ABC-type transport system, sugar-family extracellular solute-binding protein
Authors:Bradshaw, W.J, Kovacs-Simon, A, Harmer, N.J, Michell, S.L, Acharya, K.R.
Deposit date:2018-09-15
Release date:2019-08-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular features of lipoprotein CD0873: A potential vaccine against the human pathogenClostridioides difficile.
J.Biol.Chem., 294, 2019

 

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