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PDB: 283 results

4E80
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Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Descriptor: Poly(A) RNA polymerase protein cid1, URIDINE 5'-TRIPHOSPHATE
Authors:Yates, L.A, Fleurdepine, S, Rissland, O.S, DeColibus, L, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
Deposit date:2012-03-19
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Structural basis for the activity of a cytoplasmic RNA terminal uridylyl transferase.
Nat.Struct.Mol.Biol., 19, 2012
8ORX
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Structure of the murine LYVE-1 (lymphatic vessel endothelial receptor-1) hyaluronan binding domain in an unliganded state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lymphatic vessel endothelial hyaluronic acid receptor 1
Authors:Ni, T, Bannerji, S, Jackson, D.J, Gilbert, R.J.C.
Deposit date:2023-04-17
Release date:2024-10-16
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure of the murine LYVE-1 (lymphatic vessel endothelial receptor-1) hyaluronan binding domain in an unliganded state
To be published
4E8F
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Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Descriptor: ACETATE ION, GLYCEROL, Poly(A) RNA polymerase protein cid1
Authors:Yates, L.A, Fleurdepine, S, Rissland, O.S, DeColibus, L, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
Deposit date:2012-03-20
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the activity of a cytoplasmic RNA terminal uridylyl transferase.
Nat.Struct.Mol.Biol., 19, 2012
2NT9
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Crystal structure of pectin methylesterase D178A mutant in complex with hexasaccharide IV
Descriptor: Pectinesterase A, alpha-D-galactopyranuronic acid-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-alpha-D-galactopyranuronic acid
Authors:Fries, M, Brocklehurst, K, Shevchik, V.E, Pickersgill, R.W.
Deposit date:2006-11-07
Release date:2007-09-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular basis of the activity of the phytopathogen pectin methylesterase.
Embo J., 26, 2007
2NTQ
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Crystal structure of pectin methylesterase in complex with hexasaccharide VII
Descriptor: Pectinesterase A, methyl alpha-D-galactopyranuronate-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
Authors:Fries, M, Brocklehurst, K, Shevchik, V.E, Pickersgill, R.W.
Deposit date:2006-11-08
Release date:2007-09-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular basis of the activity of the phytopathogen pectin methylesterase.
Embo J., 26, 2007
4E7X
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Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Descriptor: ACETATE ION, Poly(A) RNA polymerase protein cid1
Authors:Yates, L.A, Fleurdepine, S, Rissland, O.S, DeColibus, L, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
Deposit date:2012-03-19
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for the activity of a cytoplasmic RNA terminal uridylyl transferase.
Nat.Struct.Mol.Biol., 19, 2012
2OT4
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Structure of a hexameric multiheme c nitrite reductase from the extremophile bacterium Thiolkalivibrio nitratireducens
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
Authors:Polyakov, K.M, Boyko, K.M, Slutsky, A, Tikhonova, T.V, Antipov, A.N, Zvyagilskaya, R.A, Popov, A.N, Lamzin, V.S, Bourenkov, G.P, Popov, V.O.
Deposit date:2007-02-07
Release date:2008-04-08
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution structural analysis of a novel octaheme cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens.
J.Mol.Biol., 389, 2009
2NTP
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Crystal structure of pectin methylesterase in complex with hexasaccharide VI
Descriptor: Pectinesterase A, methyl alpha-D-galactopyranuronate-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid, methyl beta-D-galactopyranuronate-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
Authors:Fries, M, Brocklehurst, K, Shevchik, V.E, Pickersgill, R.W.
Deposit date:2006-11-08
Release date:2007-09-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular basis of the activity of the phytopathogen pectin methylesterase.
Embo J., 26, 2007
2NTB
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Crystal structure of pectin methylesterase in complex with hexasaccharide V
Descriptor: Pectinesterase A, alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
Authors:Fries, M, Brocklehurst, K, Shevchik, V.E, Pickersgill, R.W.
Deposit date:2006-11-07
Release date:2007-09-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular basis of the activity of the phytopathogen pectin methylesterase.
Embo J., 26, 2007
2NT6
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Crystal structure of pectin methylesterase D178A mutant in complex with hexasaccharide III
Descriptor: Pectinesterase A, methyl alpha-D-galactopyranuronate-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-methyl alpha-D-galactopyranuronate
Authors:Fries, M, Brocklehurst, K, Shevchik, V.E, Pickersgill, R.W.
Deposit date:2006-11-07
Release date:2007-09-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular basis of the activity of the phytopathogen pectin methylesterase.
Embo J., 26, 2007
1B9G
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BU of 1b9g by Molmil
INSULIN-LIKE-GROWTH-FACTOR-1
Descriptor: PROTEIN (GROWTH FACTOR IGF-1)
Authors:De Wolf, E, Gill, R, Geddes, S, Pitts, J, Wollmer, A, Grotzinger, J.
Deposit date:1999-02-11
Release date:1999-02-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of a mini IGF-1.
Protein Sci., 5, 1996
2NSP
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BU of 2nsp by Molmil
Crystal structure of pectin methylesterase D178A mutant in complex with hexasaccharide I
Descriptor: Pectinesterase A, methyl alpha-D-galactopyranuronate-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-methyl alpha-D-galactopyranuronate
Authors:Fries, M, Brocklehurst, K, Shevchik, V.E, Pickersgill, R.W.
Deposit date:2006-11-06
Release date:2007-09-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular basis of the activity of the phytopathogen pectin methylesterase.
Embo J., 26, 2007
2C8S
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BU of 2c8s by Molmil
CYTOCHROME CL FROM METHYLOBACTERIUM EXTORQUENS
Descriptor: CALCIUM ION, CYTOCHROME C-L, PROTOPORPHYRIN IX CONTAINING FE
Authors:Williams, P.A, Coates, L, Mohammed, F, Gill, R, Erskine, P.T, Wood J, S.P, Cooper, B, Anthony, C.
Deposit date:2005-12-06
Release date:2005-12-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The 1.6A X-Ray Structure of the Unusual C-Type Cytochrome, Cytochrome Cl, from the Methylotrophic Bacterium Methylobacterium Extorquens.
J.Mol.Biol., 357, 2006
1KZN
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BU of 1kzn by Molmil
Crystal Structure of E. coli 24kDa Domain in Complex with Clorobiocin
Descriptor: CLOROBIOCIN, DNA GYRASE SUBUNIT B
Authors:Lafitte, D, Lamour, V, Tsvetkov, P.O, Makarov, A.A, Klich, M, Deprez, P, Moras, D, Briand, C, Gilli, R.
Deposit date:2002-02-07
Release date:2002-06-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:DNA gyrase interaction with coumarin-based inhibitors: the role of the hydroxybenzoate isopentenyl moiety and the 5'-methyl group of the noviose.
Biochemistry, 41, 2002
2NST
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BU of 2nst by Molmil
Crystal structure of pectin methylesterase D178A mutant in complex with hexasaccharide II
Descriptor: Pectinesterase A, alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-alpha-D-galactopyranuronic acid
Authors:Fries, M, Brocklehurst, K, Shevchik, V.E, Pickersgill, R.W.
Deposit date:2006-11-06
Release date:2007-09-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular basis of the activity of the phytopathogen pectin methylesterase.
Embo J., 26, 2007
3F29
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BU of 3f29 by Molmil
Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with sulfite
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, CALCIUM ION, Eight-heme nitrite reductase, ...
Authors:Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Slutsky, A, Tikhonova, T.V, Antipov, A.N, Zvyagilskaya, R.A, Popov, A.N, Lamzin, V.S, Bourenkov, G.P, Popov, V.O.
Deposit date:2008-10-29
Release date:2008-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding of sulfite by the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase
To be Published
2I5N
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BU of 2i5n by Molmil
1.96 A X-ray structure of photosynthetic reaction center from Rhodopseudomonas viridis:Crystals grown by microfluidic technique
Descriptor: 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, BACTERIOPHEOPHYTIN B, ...
Authors:Li, L, Mustafi, D, Fu, Q, Tereshko, V, Chen, D.L, Tice, J.D, Ismagilov, R.F.
Deposit date:2006-08-25
Release date:2006-09-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Nanoliter microfluidic hybrid method for simultaneous screening and optimization validated with crystallization of membrane proteins.
Proc.Natl.Acad.Sci.Usa, 103, 2006
1X87
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BU of 1x87 by Molmil
2.4A X-ray structure of Urocanase protein complexed with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Urocanase protein
Authors:Tereshko, V, Zaborske, J, Gilbreth, R, Dementieva, I, Collart, F, Joachimiak, A, Kossiakoff, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-08-17
Release date:2004-10-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:2.4A X-ray structure of Urocanase protein complexed with NAD
To be Published
2QBU
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BU of 2qbu by Molmil
Crystal structure of Methanothermobacter thermautotrophicus CbiL
Descriptor: Precorrin-2 methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Frank, S, Warren, M.J, Pickersgill, R.W.
Deposit date:2007-06-18
Release date:2008-04-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Elucidation of substrate specificity in the cobalamin (vitamin B12) biosynthetic methyltransferases. Structure and function of the C20 methyltransferase (CbiL) from Methanothermobacter thermautotrophicus.
J.Biol.Chem., 282, 2007
4BBK
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BU of 4bbk by Molmil
Structural and functional characterisation of the kindlin-1 pleckstrin homology domain
Descriptor: FERMITIN FAMILY HOMOLOG 1, GLYCEROL
Authors:Yates, L.A, Lumb, C.N, Brahme, N.N, Zalyte, R, Bird, L.E, De Colibus, L, Owens, R.J, Calderwood, D.A, Sansom, M.S.P, Gilbert, R.J.C.
Deposit date:2012-09-25
Release date:2012-11-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Functional Characterisation of the Kindlin-1 Pleckstrin Homology Domain
J.Biol.Chem., 287, 2012
1BSI
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BU of 1bsi by Molmil
HUMAN PANCREATIC ALPHA-AMYLASE FROM PICHIA PASTORIS, GLYCOSYLATED PROTEIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-AMYLASE, CALCIUM ION, ...
Authors:Rydberg, E.H, Sidhu, G, Vo, H.C, Hewitt, J, Cote, H.C.F, Wang, Y, Numao, S, Macgillivray, R.T.A, Overall, C.M, Brayer, G.D, Withers, S.G.
Deposit date:1998-08-28
Release date:1999-05-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cloning, mutagenesis, and structural analysis of human pancreatic alpha-amylase expressed in Pichia pastoris.
Protein Sci., 8, 1999
8X7T
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BU of 8x7t by Molmil
MCM in the Apo state.
Descriptor: mini-chromosome maintenance complex 3
Authors:Ma, J, Yi, G, Ye, M, MacGregor-Chatwin, C, Sheng, Y, Lu, Y, Li, M, Gilbert, R.J.C, Zhang, P.
Deposit date:2023-11-25
Release date:2024-01-17
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:MCM in the Apo state
To Be Published
8X7U
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MCM in complex with dsDNA in presence of ATP.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, mini-chromosome maintenance complex 3
Authors:Ma, J, Yi, G, Ye, M, MacGregor-Chatwin, C, Sheng, Y, Lu, Y, Li, M, Gilbert, R.J.C, Zhang, P.
Deposit date:2023-11-25
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:MCM in complex with dsDNA in presence of ATP
To Be Published
2OB7
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BU of 2ob7 by Molmil
Structure of tmRNA-(SmpB)2 complex as inferred from cryo-EM
Descriptor: 16S ribosomal RNA, SsrA-binding protein, transfer-messenger RNA
Authors:Frank, J, Felden, B, Gillet, R, Li, W.
Deposit date:2006-12-18
Release date:2007-01-23
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (13.6 Å)
Cite:Scaffolding as an organizing principle in trans-translation. The roles of small protein B and ribosomal protein S1.
J.Biol.Chem., 282, 2007
3ZXD
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BU of 3zxd by Molmil
wild-type lysenin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, GLYCEROL, ...
Authors:De Colibus, L, Sonnen, A.F.P, Morris, K.J, Siebert, C.A, Abrusci, P, Plitzko, J, Hodnik, V, Leippe, M, Volpi, E, Anderluh, G, Gilbert, R.J.C.
Deposit date:2011-08-09
Release date:2012-09-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of Lysenin Reveal a Shared Evolutionary Origin for Pore-Forming Proteins and its Mode of Sphingomyelin Recognition.
Structure, 20, 2012

226262

數據於2024-10-16公開中

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