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PDB: 231 results

1SYX
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BU of 1syx by Molmil
The crystal structure of a binary U5 snRNP complex
Descriptor: CD2 antigen cytoplasmic tail-binding protein 2, Spliceosomal U5 snRNP-specific 15 kDa protein
Authors:Nielsen, T.K, Liu, S, Luhrmann, R, Ficner, R.
Deposit date:2004-04-02
Release date:2005-10-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.345 Å)
Cite:Structural basis for the bifunctionality of the U5 snRNP 52K protein (CD2BP2).
J.Mol.Biol., 369, 2007
2B5D
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BU of 2b5d by Molmil
Crystal structure of the novel alpha-amylase AmyC from Thermotoga maritima
Descriptor: alpha-Amylase
Authors:Dickmanns, A, Ballschmiter, M, Liebl, W, Ficner, R.
Deposit date:2005-09-28
Release date:2006-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the novel alpha-amylase AmyC from Thermotoga maritima.
Acta Crystallogr.,Sect.D, 62, 2006
1SH7
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BU of 1sh7 by Molmil
Crystal structure of a cold adapted subtilisin-like serine proteinase
Descriptor: CALCIUM ION, extracellular subtilisin-like serine proteinase, phenylmethanesulfonic acid
Authors:Arnorsdottir, J, Kristjansson, M.M, Ficner, R.
Deposit date:2004-02-25
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of a subtilisin-like serine proteinase from a psychrotrophic Vibrio species reveals structural aspects of cold adaptation.
Febs J., 272, 2005
1WKF
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BU of 1wkf by Molmil
TRNA-GUANINE TRANSGLYCOSYLASE
Descriptor: TRNA-GUANINE TRANSGLYCOSYLASE, ZINC ION
Authors:Romier, C, Reuter, K, Suck, D, Ficner, R.
Deposit date:1996-08-06
Release date:1997-07-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutagenesis and crystallographic studies of Zymomonas mobilis tRNA-guanine transglycosylase reveal aspartate 102 as the active site nucleophile.
Biochemistry, 35, 1996
1WKE
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BU of 1wke by Molmil
TRNA-GUANINE TRANSGLYCOSYLASE
Descriptor: TRNA-GUANINE TRANSGLYCOSYLASE, ZINC ION
Authors:Romier, C, Reuter, K, Suck, D, Ficner, R.
Deposit date:1996-08-06
Release date:1997-07-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutagenesis and crystallographic studies of Zymomonas mobilis tRNA-guanine transglycosylase reveal aspartate 102 as the active site nucleophile.
Biochemistry, 35, 1996
1WKD
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BU of 1wkd by Molmil
TRNA-GUANINE TRANSGLYCOSYLASE
Descriptor: TRNA-GUANINE TRANSGLYCOSYLASE, ZINC ION
Authors:Romier, C, Reuter, K, Suck, D, Ficner, R.
Deposit date:1996-08-06
Release date:1997-07-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mutagenesis and crystallographic studies of Zymomonas mobilis tRNA-guanine transglycosylase reveal aspartate 102 as the active site nucleophile.
Biochemistry, 35, 1996
1PP1
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BU of 1pp1 by Molmil
Crystal structure of the Borna Disease Virus Nucleoprotein
Descriptor: p40 nucleoprotein
Authors:Rudolph, M.G, Kraus, I, Dickmanns, A, Garten, W, Ficner, R.
Deposit date:2003-06-16
Release date:2003-10-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the Borna Disease Virus nucleoprotein
Structure, 11, 2003
6YJ8
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BU of 6yj8 by Molmil
DarB-APO
Descriptor: ACETATE ION, CBS domain-containing protein YkuL, DI(HYDROXYETHYL)ETHER
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:DarB from B. subtilis
To Be Published
6YJ9
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DarB in complex with 3'3'cGAMP
Descriptor: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, CBS domain-containing protein YkuL, CHLORIDE ION
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:DarB from B. subtilis
To Be Published
6YJ7
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DarB fom B. subtilis in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CBS domain-containing protein YkuL, CHLORIDE ION
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:DarB from B. subtilis
To Be Published
6YJA
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DarB fom B. subtilis in complex with c-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, CALCIUM ION, CBS domain-containing protein YkuL, ...
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:DarB from B. subtilis
To Be Published
1N93
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BU of 1n93 by Molmil
Crystal Structure of the Borna Disease Virus Nucleoprotein
Descriptor: p40 nucleoprotein
Authors:Rudolph, M.G, Kraus, I, Dickmanns, A, Garten, W, Ficner, R.
Deposit date:2002-11-22
Release date:2003-10-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of the Borna Disease Virus nucleoprotein
Structure, 11, 2003
5LTA
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BU of 5lta by Molmil
Crystal structure of the Prp43-ADP-BeF3-U7-RNA complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, CACODYLATE ION, ...
Authors:Tauchert, M.J, Ficner, R.
Deposit date:2016-09-06
Release date:2017-01-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.621 Å)
Cite:Structural insights into the mechanism of the DEAH-box RNA helicase Prp43.
Elife, 6, 2017
5LTJ
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BU of 5ltj by Molmil
Crystal structure of the Prp43-ADP-BeF3 complex (in orthorhombic space group)
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Tauchert, M.J, Ficner, R.
Deposit date:2016-09-06
Release date:2017-01-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural insights into the mechanism of the DEAH-box RNA helicase Prp43.
Elife, 6, 2017
6I3O
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BU of 6i3o by Molmil
Crystal structure of DEAH-box ATPase Prp22
Descriptor: Putative pre-mRNA splicing factor
Authors:Hamann, F, Ficner, R.
Deposit date:2018-11-07
Release date:2019-03-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structural basis for RNA translocation by DEAH-box ATPases.
Nucleic Acids Res., 47, 2019
4TN1
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BU of 4tn1 by Molmil
Translation initiation factor eIF5B (517-858) mutant D533R from C. thermophilum, bound to GTPgammaS
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, eIF5B
Authors:Kuhle, B, Ficner, R.
Deposit date:2014-06-02
Release date:2014-09-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A monovalent cation acts as structural and catalytic cofactor in translational GTPases.
Embo J., 33, 2014
4TMW
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BU of 4tmw by Molmil
Translation initiation factor eIF5B (517-858) from C. thermophilum, bound to GTP and Sodium
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, SODIUM ION, ...
Authors:Kuhle, B, Ficner, R.
Deposit date:2014-06-02
Release date:2014-09-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A monovalent cation acts as structural and catalytic cofactor in translational GTPases.
Embo J., 33, 2014
4TMV
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BU of 4tmv by Molmil
Translation initiation factor eIF5B (517-858) from C. thermophilum, bound to GTPgammaS and Sodium
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Kuhle, B, Ficner, R.
Deposit date:2014-06-02
Release date:2014-09-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:A monovalent cation acts as structural and catalytic cofactor in translational GTPases.
Embo J., 33, 2014
4H6C
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BU of 4h6c by Molmil
Crystal Structure of the Allene Oxide Cyclase 1 from Physcomitrella patens
Descriptor: Allene oxide cyclase, HEXANE-1,6-DIOL, PHOSPHATE ION
Authors:Neumann, P, Ficner, R.
Deposit date:2012-09-19
Release date:2012-10-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal Structures of Physcomitrella patens AOC1 and AOC2: Insights into the Enzyme Mechanism and Differences in Substrate Specificity.
Plant Physiol., 160, 2012
5AFI
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BU of 5afi by Molmil
2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Fischer, N, Neumann, P, Konevega, A.L, Bock, L.V, Ficner, R, Rodnina, M.V, Stark, H.
Deposit date:2015-01-22
Release date:2015-03-11
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of the E. coli ribosome-EF-Tu complex at <3 angstrom resolution by Cs-corrected cryo-EM.
Nature, 520, 2015
1V0E
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BU of 1v0e by Molmil
Endosialidase of Bacteriophage K1F
Descriptor: ENDO-ALPHA-SIALIDASE, PHOSPHATE ION
Authors:Stummeyer, K, Dickmanns, A, Muehlenhoff, M, Gerady-Schahn, R, Ficner, R.
Deposit date:2004-03-28
Release date:2004-12-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Polysialic Acid-Degrading Endosialidase of Bacteriophage K1F
Nat.Struct.Mol.Biol., 12, 2005
1V0F
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BU of 1v0f by Molmil
Endosialidase of Bacteriophage K1F in complex with oligomeric alpha-2,8-sialic acid
Descriptor: ENDO-ALPHA-SIALIDASE, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid, N-acetyl-beta-neuraminic acid, ...
Authors:Stummeyer, K, Dickmanns, A, Muehlenhoff, M, Gerady-Schahn, R, Ficner, R.
Deposit date:2004-03-28
Release date:2004-12-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure of the Polysialic Acid-Degrading Endosialidase of Bacteriophage K1F
Nat.Struct.Mol.Biol., 12, 2005
5LTK
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BU of 5ltk by Molmil
Crystal structure of the Prp43-ADP-BeF3 complex (in hexagonal space group)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Tauchert, M.J, Ficner, R.
Deposit date:2016-09-06
Release date:2017-01-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.241 Å)
Cite:Structural insights into the mechanism of the DEAH-box RNA helicase Prp43.
Elife, 6, 2017
5LZA
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BU of 5lza by Molmil
Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
Deposit date:2016-09-29
Release date:2016-11-23
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
5LZF
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Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
Deposit date:2016-09-29
Release date:2016-11-23
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016

221051

數據於2024-06-12公開中

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