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PDB: 98 results

1PG1
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PROTEGRIN 1 (PG1) FROM PORCINE LEUKOCYTES, NMR, 20 STRUCTURES
Descriptor: PROTEGRIN-1
Authors:Fahrner, R.L, Dieckmann, T, Harwig, S.S.L, Lehrer, R.I, Eisenberg, D, Feigon, J.
Deposit date:1998-03-20
Release date:1998-05-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of protegrin-1, a broad-spectrum antimicrobial peptide from porcine leukocytes.
Chem.Biol., 3, 1996
2LBS
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BU of 2lbs by Molmil
Solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (Rnt1p) in complex with AAGU tetraloop hairpin
Descriptor: RNA (32-MER), Ribonuclease 3
Authors:Wang, Z, Hartman, E, Roy, K, Chanfreau, G, Feigon, J.
Deposit date:2011-04-06
Release date:2011-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of a Yeast RNase III dsRBD Complex with a Noncanonical RNA Substrate Provides New Insights into Binding Specificity of dsRBDs.
Structure, 19, 2011
1EBS
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STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES
Descriptor: HIV-1 REV RESPONSIVE ELEMENT RNA
Authors:Peterson, R.D, Feigon, J.
Deposit date:1997-03-20
Release date:1997-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural change in Rev responsive element RNA of HIV-1 on binding Rev peptide.
J.Mol.Biol., 264, 1996
1EBQ
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STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES
Descriptor: HIV-1 REV RESPONSIVE ELEMENT RNA
Authors:Peterson, R.D, Feigon, J.
Deposit date:1997-03-20
Release date:1997-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural change in Rev responsive element RNA of HIV-1 on binding Rev peptide.
J.Mol.Biol., 264, 1996
1EBR
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BU of 1ebr by Molmil
STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES
Descriptor: HIV-1 REV RESPONSIVE ELEMENT RNA
Authors:Peterson, R.D, Feigon, J.
Deposit date:1997-03-20
Release date:1997-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural change in Rev responsive element RNA of HIV-1 on binding Rev peptide.
J.Mol.Biol., 264, 1996
1FJ7
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BU of 1fj7 by Molmil
SOLUTION STRUCTURE OF NUCLEOLIN RBD1
Descriptor: NUCLEOLIN RBD1
Authors:Allain, F.H.-T, Gilbert, D.E, Bouvet, P, Feigon, J.
Deposit date:2000-08-07
Release date:2000-10-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target.
J.Mol.Biol., 303, 2000
1FJC
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SOLUTION STRUCTURE OF NUCLEOLIN RBD2
Descriptor: NUCLEOLIN RBD2
Authors:Allain, F.H.-T, Gilbert, D.E, Bouvet, P, Feigon, J.
Deposit date:2000-08-07
Release date:2000-10-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target.
J.Mol.Biol., 303, 2000
2K95
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Solution structure of the wild-type P2B-P3 pseudoknot of human telomerase RNA
Descriptor: Telomerase RNA P2b-P3 pseudoknot
Authors:Kim, N.-K, Zhang, Q, Zhou, J, Theimer, C.A, Peterson, R.D, Feigon, J.
Deposit date:2008-09-29
Release date:2008-11-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the Wild-type Pseudoknot of Human Telomerase RNA.
J.Mol.Biol., 384, 2008
1D3X
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INTRAMOLECULAR DNA TRIPLEX, NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*CP*TP*CP*TP*T)-3'), DNA (5'-D(*TP*TP*CP*TP*CP*TP*CP*T)-3')
Authors:Tarkoy, M, Phipps, A.K, Schultze, P, Feigon, J.
Deposit date:1998-02-05
Release date:1998-05-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of an intramolecular DNA triplex linked by hexakis(ethylene glycol) units: d(AGAGAGAA-(EG)6-TTCTCTCT-(EG)6-TCTCTCTT).
Biochemistry, 37, 1998
2LSL
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BU of 2lsl by Molmil
Solution structure of the C-terminal domain of Tetrahymena telomerase protein p65
Descriptor: Telomerase associated protein p65
Authors:Singh, M, Wang, Z, Koo, B, Patel, A, Cascio, D, Collins, K, Feigon, J.
Deposit date:2012-05-01
Release date:2012-06-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for Telomerase RNA Recognition and RNP Assembly by the Holoenzyme La Family Protein p65.
Mol.Cell, 47, 2012
2LBX
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BU of 2lbx by Molmil
Solution structure of the S. cerevisiae H/ACA RNP protein Nhp2p
Descriptor: H/ACA ribonucleoprotein complex subunit 2
Authors:Koo, B, Park, C, Fernandez, C.F, Chim, N, Ding, Y, Chanfreau, G, Feigon, J.
Deposit date:2011-04-07
Release date:2011-07-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of H/ACA RNP Protein Nhp2p Reveals Cis/Trans Isomerization of a Conserved Proline at the RNA and Nop10 Binding Interface.
J.Mol.Biol., 411, 2011
2LUJ
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Solution structure of a parallel-stranded oligoisoguanine DNA pentaplex formed by d(T(iG)4T) in the presence of Cs ions
Descriptor: DNA (5'-D(*TP*(IGU)P*(IGU)P*(IGU)P*(IGU)P*T)-3')
Authors:Kang, M, Heuberger, B, Chaput, J.C, Switzer, C, Feigon, J.
Deposit date:2012-06-14
Release date:2012-07-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of a Parallel-Stranded Oligoisoguanine DNA Pentaplex Formed by d(T(iG)4T) in the Presence of Cs(+) Ions.
Angew.Chem.Int.Ed.Engl., 51, 2012
2M21
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Solution structure of the Tetrahymena telomerase RNA stem IV terminal loop
Descriptor: 5'-R(*GP*GP*CP*GP*AP*UP*AP*CP*AP*CP*UP*AP*UP*UP*UP*AP*UP*CP*GP*CP*C)-3'
Authors:Cash, D.D, Richards, R.J, Wu, H, Trantirek, L, O'Connor, C.M, Feigon, J, Collins, K.
Deposit date:2012-12-11
Release date:2013-03-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural study of elements of Tetrahymena telomerase RNA stem-loop IV domain important for function.
Rna, 12, 2006
2L3E
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BU of 2l3e by Molmil
Solution structure of P2a-J2a/b-P2b of human telomerase RNA
Descriptor: 35-MER
Authors:Zhang, Q, Kim, N, Peterson, R.D, Wang, Z, Feigon, J.
Deposit date:2010-09-13
Release date:2010-11-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Inaugural Article: Structurally conserved five nucleotide bulge determines the overall topology of the core domain of human telomerase RNA.
Proc.Natl.Acad.Sci.USA, 107, 2010
2MNW
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Solution structure of the P22S mutant of N-terminal CS domain of human Shq1
Descriptor: Protein SHQ1 homolog
Authors:Singh, M, Wang, Z, Cascio, D, Feigon, J.
Deposit date:2014-04-16
Release date:2015-01-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Interactions of the CS Domain of Human H/ACA RNP Assembly Protein Shq1.
J.Mol.Biol., 427, 2015
2MIY
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Solution NMR structure of a preQ1 Class II riboswitch from Streptococcus pneumoniae
Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, RNA_(59-MER)
Authors:Kang, M, Eichhorn, C.D, Feigon, J.
Deposit date:2013-12-20
Release date:2014-01-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural determinants for ligand capture by a class II preQ1 riboswitch.
Proc.Natl.Acad.Sci.USA, 111, 2014
2M22
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BU of 2m22 by Molmil
Solution structure of the helix II template boundary element from Tetrahymena telomerase RNA
Descriptor: 5'-R(*GP*GP*CP*AP*GP*AP*UP*CP*UP*GP*UP*AP*AP*UP*AP*GP*AP*AP*CP*UP*GP*CP*C)-3'
Authors:Cash, D.D, Richards, R.J, Theimer, C.A, Finger, D.L, Feigon, J.
Deposit date:2012-12-11
Release date:2013-03-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the helix II template boundary element from Tetrahymena telomerase RNA
Nucleic Acids Res., 34, 2006
2M8K
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A pyrimidine motif triple helix in the Kluyveromyces lactis telomerase RNA pseudoknot is essential for function in vivo
Descriptor: RNA (48-MER)
Authors:Cash, D.D, Cohen, O, Kim, N, Shefer, K, Brown, Y, Ulyanov, N.B, Tzfati, Y, Feigon, J.
Deposit date:2013-05-22
Release date:2013-06-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Pyrimidine motif triple helix in the Kluyveromyces lactis telomerase RNA pseudoknot is essential for function in vivo.
Proc.Natl.Acad.Sci.USA, 110, 2013
2MHI
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BU of 2mhi by Molmil
Solution structure of the CR4/5 domain of medaka telomerase RNA
Descriptor: Medaka telomerase RNA
Authors:Kim, N, Zhang, Q, Feigon, J.
Deposit date:2013-11-23
Release date:2013-12-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and sequence elements of the CR4/5 domain of medaka telomerase RNA important for telomerase function.
Nucleic Acids Res., 42, 2014
2L1V
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BU of 2l1v by Molmil
Solution structure of a preQ1 riboswitch (Class I) aptamer bound to preQ1
Descriptor: 36-MER, 7-DEAZA-7-AMINOMETHYL-GUANINE
Authors:Kang, M, Zhang, Q, Feigon, J.
Deposit date:2010-08-06
Release date:2010-09-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into Riboswitch Control of the Biosynthesis of Queuosine, a Modified Nucleotide Found in the Anticodon of tRNA
Mol.Cell, 33, 2009
2P89
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Solution structure of the 3' pseudouridyation pocket of U65 snoRNA with bound substrate
Descriptor: 28S rRNA, U65 H/ACA snoRNA
Authors:Wu, H, Feigon, J.
Deposit date:2007-03-22
Release date:2007-04-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:H/ACA small nucleolar RNA pseudouridylation pockets bind substrate RNA to form three-way junctions that position the target U for modification.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2LBW
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Solution structure of the S. cerevisiae H/ACA RNP protein Nhp2p-S82W mutant
Descriptor: H/ACA ribonucleoprotein complex subunit 2
Authors:Koo, B, Park, C, Fernandez, C.F, Chim, N, Ding, Y, Chanfreau, G, Feigon, J.
Deposit date:2011-04-07
Release date:2011-07-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of H/ACA RNP Protein Nhp2p Reveals Cis/Trans Isomerization of a Conserved Proline at the RNA and Nop10 Binding Interface.
J.Mol.Biol., 411, 2011
2KYE
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Solution structure of the pseudouridine modified P6.1 hairpin of human telomerase RNA
Descriptor: RNA (5'-R(*GP*AP*GP*AP*GP*(PSU)P*(PSU)P*GP*GP*GP*CP*(PSU)P*CP*(PSU)P*C)-3')
Authors:Kim, N.-K, Theimer, C.A, Mitchell, J.R, Collins, K, Feigon, J.
Deposit date:2010-05-25
Release date:2010-06-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Effect of pseudouridylation on the structure and activity of the catalytically essential P6.1 hairpin in human telomerase RNA.
Nucleic Acids Res., 38, 2010
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