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PDB: 40736 件

7BAP
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Notum Fragment 648
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, Palmitoleoyl-protein carboxylesterase NOTUM, ...
著者Zhao, Y, Jones, E.Y.
登録日2020-12-16
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structural Analysis and Development of Notum Fragment Screening Hits.
Acs Chem Neurosci, 13, 2022
8P0V
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BU of 8p0v by Molmil
Structure of the human Commander complex coiled coils, DENND10 and partial Retriever subcomplex
分子名称: Coiled-coil domain-containing protein 22, Coiled-coil domain-containing protein 93, DENN domain-containing protein 10, ...
著者Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
登録日2023-05-10
公開日2024-03-20
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 31, 2024
7BCK
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BU of 7bck by Molmil
Notum Fragment 791
分子名称: (2S)-N-(4-Methoxybenzyl)tetrahydrofuran-2-carboxamide, Palmitoleoyl-protein carboxylesterase NOTUM, SULFATE ION
著者Zhao, Y, Jones, E.Y.
登録日2020-12-19
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Analysis and Development of Notum Fragment Screening Hits.
Acs Chem Neurosci, 13, 2022
7BD9
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BU of 7bd9 by Molmil
Notum Fragment 886
分子名称: (4-chloranyl-2-methyl-pyrazol-3-yl)-piperidin-1-yl-methanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
著者Zhao, Y, Jones, E.Y.
登録日2020-12-21
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structural Analysis and Development of Notum Fragment Screening Hits.
Acs Chem Neurosci, 13, 2022
5L38
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BU of 5l38 by Molmil
The structure of the hexagonal shell protein MSM0272 from the RMM microcompartment
分子名称: CHLORIDE ION, MSM0272 - RMM microcompartment shell protein, SODIUM ION
著者Mallette, E, Kimber, M.S.
登録日2016-08-03
公開日2016-12-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
5CWU
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BU of 5cwu by Molmil
Crystal structure of Chaetomium thermophilum Nup188 TAIL domain
分子名称: GLYCEROL, Nucleoporin NUP188
著者Stuwe, T, Bley, C.J, Thierbach, K, Petrovic, S, Schilbach, S, Mayo, D.J, Perriches, T, Rundlet, E.J, Jeon, Y.E, Collins, L.N, Lin, D.H, Paduch, M, Koide, A, Lu, V, Fischer, J, Hurt, E, Koide, S, Kossiakoff, A.A, Hoelz, A.
登録日2015-07-28
公開日2015-09-16
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Architecture of the fungal nuclear pore inner ring complex.
Science, 350, 2015
4X88
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BU of 4x88 by Molmil
E178D Selectivity filter mutant of NavMS voltage-gated pore
分子名称: HEGA-10, Ion transport protein, PENTAETHYLENE GLYCOL, ...
著者Naylor, C.E, Bagneris, C, Wallace, B.A.
登録日2014-12-10
公開日2016-02-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Molecular basis of ion permeability in a voltage-gated sodium channel.
Embo J., 35, 2016
7BNL
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BU of 7bnl by Molmil
Notum ARUK3003710
分子名称: (4~{E})-2-(3,4-dimethylphenyl)-4-[(1-methylpyrazol-4-yl)methylidene]-1,3-oxazol-5-one, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhao, Y, Jones, E.Y, Fish, P.V, Svensson, F, Steadman, D.
登録日2021-01-22
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Notum Inhibitor ARUK3003710
To Be Published
4X8K
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BU of 4x8k by Molmil
Mycobacterium tuberculosis RbpA-SID in complex with SigmaA domain 2
分子名称: 1,2-ETHANEDIOL, RNA polymerase sigma factor SigA, RNA polymerase-binding protein RbpA, ...
著者Hubin, E.A, Flack, J.E, Tabib-Salazar, A, Paget, M.S, Darst, S.A, Campbell, E.A.
登録日2014-12-10
公開日2015-06-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Structural, functional, and genetic analyses of the actinobacterial transcription factor RbpA.
Proc.Natl.Acad.Sci.USA, 112, 2015
5L8Y
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BU of 5l8y by Molmil
Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-937
分子名称: 2-[(4-{5-[(4aR,8aS)-3-cycloheptyl-4-oxo-3,4,4a,5,8,8a-hexahydrophthalazin-1-yl]-2-methoxyphenyl}phenyl)formamido]-N-(2-hydroxyethyl)acetamide, FORMIC ACID, GLYCEROL, ...
著者Singh, A.K, Anthonyrajah, E.S, Brown, D.G.
登録日2016-06-08
公開日2018-03-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Targeting a Subpocket in Trypanosoma brucei Phosphodiesterase B1 (TbrPDEB1) Enables the Structure-Based Discovery of Selective Inhibitors with Trypanocidal Activity.
J. Med. Chem., 61, 2018
7RYG
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BU of 7ryg by Molmil
A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S
分子名称: (4S,4aS,5aR,12aS)-4-(diethylamino)-3,10,12,12a-tetrahydroxy-1,11-dioxo-8-[(2S)-pyrrolidin-2-yl]-7-(trifluoromethyl)-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide, 16S Ribosomal RNA, 23S ribosomal RNA, ...
著者Morgan, C.E, Yu, E.W.
登録日2021-08-25
公開日2022-02-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.38 Å)
主引用文献An Analysis of the Novel Fluorocycline TP-6076 Bound to Both the Ribosome and Multidrug Efflux Pump AdeJ from Acinetobacter baumannii.
Mbio, 13, 2022
6WFG
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BU of 6wfg by Molmil
Crystal structure of human Naa50 in complex with an inhibitor (compound 3) identified using DNA encoded library technology
分子名称: (2S)-N-[(2S)-3-[1-(3-tert-butyl-1-methyl-1H-pyrazole-5-carbonyl)piperidin-4-yl]-1-(methylamino)-1-oxopropan-2-yl]-6-oxopiperidine-2-carboxamide, COENZYME A, N-alpha-acetyltransferase 50
著者Greasley, S.E, Feng, J, Deng, Y.-L, Stewart, A.E.
登録日2020-04-03
公開日2020-07-01
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Characterization of SpecificN-alpha-Acetyltransferase 50 (Naa50) Inhibitors Identified Using a DNA Encoded Library.
Acs Med.Chem.Lett., 11, 2020
6ZG7
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BU of 6zg7 by Molmil
bovine ATP synthase rotor domain, state 1
分子名称: ATP synthase F(0) complex subunit C2, mitochondrial, ATP synthase subunit delta, ...
著者Spikes, T, Montgomery, M.G, Walker, J.E.
登録日2020-06-18
公開日2020-09-09
最終更新日2020-09-30
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Structure of the dimeric ATP synthase from bovine mitochondria.
Proc.Natl.Acad.Sci.USA, 117, 2020
6S4P
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BU of 6s4p by Molmil
The crystal structure of glycogen phosphorylase in complex with 13
分子名称: (2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-(4-naphthalen-2-yl-1,3-thiazol-2-yl)oxane-3,4,5-triol, Glycogen phosphorylase, muscle form, ...
著者Kyriakis, E, Solovou, T.G.A, Papaioannou, O.S.E, Skamnaki, V.T, Leonidas, D.D.
登録日2019-06-28
公開日2020-02-19
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献The architecture of hydrogen and sulfur sigma-hole interactions explain differences in the inhibitory potency of C-beta-d-glucopyranosyl thiazoles, imidazoles and an N-beta-d glucopyranosyl tetrazole for human liver glycogen phosphorylase and offer new insights to structure-based design.
Bioorg.Med.Chem., 28, 2020
2NU8
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BU of 2nu8 by Molmil
C123aT Mutant of E. coli Succinyl-CoA Synthetase
分子名称: COENZYME A, GLYCEROL, PHOSPHATE ION, ...
著者Fraser, M.E.
登録日2006-11-08
公開日2007-07-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Participation of Cys 123alpha of Escherichia coli Succinyl-CoA Synthetase in Catalysis
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
8AJX
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BU of 8ajx by Molmil
E. coli NfsA with Fumarate
分子名称: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, FUMARIC ACID, ...
著者Day, M.A, Jarrom, D, White, S.A, Hyde, E.I.
登録日2022-07-28
公開日2023-01-18
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Oxygen-insensitive nitroreductase E. coli NfsA, but not NfsB, is inhibited by fumarate.
Proteins, 91, 2023
8ABV
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BU of 8abv by Molmil
Crystal structure of SpLdpA in complex with erythro-DGPD
分子名称: (1R,2S)-1,2-bis(3-methoxy-4-oxidanyl-phenyl)propane-1,3-diol, (1S,2R)-1,2-bis(3-methoxy-4-oxidanyl-phenyl)propane-1,3-diol, GLYCEROL, ...
著者Zahn, M, Kuatsjah, E, Beckham, G.T, McGeehan, J.E.
登録日2022-07-04
公開日2023-02-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.683 Å)
主引用文献Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ABT
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Crystal structure of NaLdpA in complex with the product analog Resveratrol
分子名称: RESVERATROL, SULFATE ION, SnoaL-like domain-containing protein
著者Zahn, M, Kuatsjah, E, Beckham, G.T, McGeehan, J.E.
登録日2022-07-04
公開日2023-02-01
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ABU
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Crystal structure of NaLdpA mutant H97Q in complex with erythro-DGPD
分子名称: (1S,2R)-1,2-bis(3-methoxy-4-oxidanyl-phenyl)propane-1,3-diol, SnoaL-like domain-containing protein
著者Zahn, M, Kuatsjah, E, Beckham, G.T, McGeehan, J.E.
登録日2022-07-04
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.661 Å)
主引用文献Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8W01
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BU of 8w01 by Molmil
Crystal structure of DUF1735 domain-containing protein (GH18-like) from Bacteroides faecium at 2.7 A resolution (Space group C2)
分子名称: DUF1735 domain-containing protein
著者Sastre, D.E, Navarro, M.V.A.S, Sultana, N, Sundberg, E.J.
登録日2024-02-13
公開日2024-05-29
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate.
Nat Commun, 15, 2024
7RS6
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BU of 7rs6 by Molmil
Cryo-EM structure of Kip3 (AMPPNP) bound to GMPCPP-Stabilized Microtubules
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Hernandez-Lopez, R.A, Leschziner, A.E, Arellano-Santoyo, H, Pellman, D, Stokasimov, E, Wang, R.Y.-R.
登録日2021-08-11
公開日2022-08-17
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Multimodal tubulin binding by the yeast kinesin-8, Kip3, underlies its motility and depolymerization
Biorxiv, 2024
5JQU
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Crystal structure of Cytochrome P450 BM3 heme domain G265F/T269V/L272W/L322I/F405M/A406S (WIVS-FM) variant with iron(III) deuteroporphyrin IX bound
分子名称: Bifunctional cytochrome P450/NADPH--P450 reductase, FE(III) DEUTEROPORPHYRIN IX
著者Reynolds, E.W, McHenry, M.W, Cannac, F, Gober, J.G, Snow, C.D, Brustad, E.M.
登録日2016-05-05
公開日2016-09-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.162 Å)
主引用文献An Evolved Orthogonal Enzyme/Cofactor Pair.
J.Am.Chem.Soc., 138, 2016
8W04
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BU of 8w04 by Molmil
Crystal structure of DUF1735-domain containing protein (GH18-like) from Bacteroides faecium at 2.9 A resolution (Space group P21)
分子名称: DUF1735 domain-containing protein
著者Sastre, D.E, Navarro, M.V.A.S, Sultana, N, Sundberg, E.J.
登録日2024-02-13
公開日2024-05-29
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate.
Nat Commun, 15, 2024
6ZIK
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bovine ATP synthase rotor domain, state 3
分子名称: ATP synthase F(0) complex subunit C2, mitochondrial, ATP synthase subunit delta, ...
著者Spikes, T, Montgomery, M.G, Walker, J.E.
登録日2020-06-26
公開日2020-09-09
最終更新日2020-09-30
実験手法ELECTRON MICROSCOPY (3.66 Å)
主引用文献Structure of the dimeric ATP synthase from bovine mitochondria.
Proc.Natl.Acad.Sci.USA, 117, 2020
6WQV
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GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis with bound cellotriose
分子名称: 1,2-ETHANEDIOL, Endoglucanase, NITRATE ION, ...
著者Bianchetti, C.M, Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-04-29
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020

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