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PDB: 81 件

5UYK
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BU of 5uyk by Molmil
70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Loveland, A.B, Demo, G, Grigorieff, N, Korostelev, A.A.
登録日2017-02-24
公開日2017-06-07
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Ensemble cryo-EM elucidates the mechanism of translation fidelity
Nature, 546, 2017
5N2N
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BU of 5n2n by Molmil
Crystal structure of the receiver domain of the histidine kinase CKI1 from Arabidopsis thaliana complexed with Mg2+ and BeF3-
分子名称: BERYLLIUM TRIFLUORIDE ION, Histidine kinase CKI1, MAGNESIUM ION
著者Otrusinova, O, Demo, G, Padrta, P, Jasenakova, Z, Pekarova, B, Gelova, Z, Szmitkowska, A, Kaderavek, P, Jansen, S, Zachrdla, M, Klumpler, T, Marek, J, Hritz, J, Janda, L, Iwai, H, Wimmerova, M, Hejatko, J, Zidek, L.
登録日2017-02-08
公開日2017-09-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Conformational dynamics are a key factor in signaling mediated by the receiver domain of a sensor histidine kinase from Arabidopsis thaliana.
J. Biol. Chem., 292, 2017
6GXS
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BU of 6gxs by Molmil
Crystal structure of CV39L lectin from Chromobacterium violaceum at 1.8 A resolution
分子名称: 1,2-ETHANEDIOL, CV39L lectin, DI(HYDROXYETHYL)ETHER, ...
著者Sykorova, P, Novotna, J, Demo, G, Pompidor, G, Dubska, E, Komarek, J, Fujdiarova, E, Haronikova, L, Varrot, A, Imberty, A, Shilova, N, Bovin, N, Pokorna, M, Wimmerova, M.
登録日2018-06-27
公開日2019-12-04
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Characterization of novel lectins from Burkholderia pseudomallei and Chromobacterium violaceum with seven-bladed beta-propeller fold.
Int.J.Biol.Macromol., 152, 2020
6GXR
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BU of 6gxr by Molmil
Crystal structure of BP39L lectin from Burkholderia pseudomallei at 1.7 A resolution
分子名称: BP39L lectin, SULFATE ION
著者Sykorova, P, Novotna, J, Demo, G, Pompidor, G, Dubska, E, Komarek, J, Fujdiarova, E, Haronikova, L, Varrot, A, Imberty, A, Shilova, N, Bovin, N, Pokorna, M, Wimmerova, M.
登録日2018-06-27
公開日2019-12-04
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Characterization of novel lectins from Burkholderia pseudomallei and Chromobacterium violaceum with seven-bladed beta-propeller fold.
Int.J.Biol.Macromol., 152, 2020
6OG7
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BU of 6og7 by Molmil
70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Svidritskiy, E, Demo, G, Loveland, A.B, Xu, C, Korostelev, A.A.
登録日2019-04-01
公開日2019-09-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Extensive ribosome and RF2 rearrangements during translation termination.
Elife, 8, 2019
6OFX
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BU of 6ofx by Molmil
Non-rotated ribosome (Structure I)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Svidritskiy, E, Demo, G, Loveland, A.B, Xu, C, Korostelev, A.A.
登録日2019-04-01
公開日2019-09-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Extensive ribosome and RF2 rearrangements during translation termination.
Elife, 8, 2019
6OGG
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BU of 6ogg by Molmil
70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Svidritskiy, E, Demo, G, Loveland, A.B, Xu, C, Korostelev, A.A.
登録日2019-04-02
公開日2019-09-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Extensive ribosome and RF2 rearrangements during translation termination.
Elife, 8, 2019
6OGF
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BU of 6ogf by Molmil
70S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Svidritskiy, E, Demo, G, Loveland, A.B, Xu, C, Korostelev, A.A.
登録日2019-04-02
公開日2019-09-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Extensive ribosome and RF2 rearrangements during translation termination.
Elife, 8, 2019
6OGI
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BU of 6ogi by Molmil
70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Svidritskiy, E, Demo, G, Loveland, A.B, Xu, C, Korostelev, A.A.
登録日2019-04-02
公開日2019-09-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Extensive ribosome and RF2 rearrangements during translation termination.
Elife, 8, 2019
6FPD
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BU of 6fpd by Molmil
AB21 protein from Agaricus bisporus
分子名称: 1,2-ETHANEDIOL, Protein AB21, SODIUM ION
著者Houser, J, Demo, G, Komarek, J, Wimmerova, M.
登録日2018-02-09
公開日2018-05-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and properties of AB21, a novel Agaricus bisporus protein with structural relation to bacterial pore-forming toxins.
Proteins, 86, 2018
6O3H
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BU of 6o3h by Molmil
Icosahedral reconstruction of the thermophilic bacteriophage P74-26 capsid
分子名称: Major head protein, P74-26 Head Decoration Protein
著者Stone, N.P, Demo, G, Agnello, E, Kelch, B.A.
登録日2019-02-26
公開日2019-07-24
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Principles for enhancing virus capsid capacity and stability from a thermophilic virus capsid structure.
Nat Commun, 10, 2019
8DG5
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BU of 8dg5 by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex IIb
分子名称: Endoribonuclease Dcr-1, Loquacious, isoform B, ...
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
5C9P
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BU of 5c9p by Molmil
Crystal structure of recombinant PLL lectin complexed with L-fucose from Photorhabdus luminescens at 1.75 A resolution
分子名称: GLYCEROL, PLL lectin, alpha-L-fucopyranose
著者Kumar, A, Sykorova, P, Demo, G, Dobes, P, Hyrsl, P, Wimmerova, M.
登録日2015-06-28
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A Novel Fucose-binding Lectin from Photorhabdus luminescens (PLL) with an Unusual Heptabladed beta-Propeller Tetrameric Structure.
J.Biol.Chem., 291, 2016
5C9L
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BU of 5c9l by Molmil
Crystal structure of native PLL lectin from Photorhabdus luminescens at 1.65 A resolution
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Kumar, A, Sykorova, P, Demo, G, Dobes, P, Hyrsl, P, Wimmerova, M.
登録日2015-06-27
公開日2016-10-19
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A Novel Fucose-binding Lectin from Photorhabdus luminescens (PLL) with an Unusual Heptabladed beta-Propeller Tetrameric Structure.
J.Biol.Chem., 291, 2016
5C9O
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BU of 5c9o by Molmil
Crystal structure of recombinant PLL lectin from Photorhabdus luminescens at 1.5 A resolution
分子名称: GLYCEROL, PLL lectin
著者Kumar, A, Sykorova, P, Demo, G, Dobes, P, Hyrsl, P, Wimmerova, M.
登録日2015-06-28
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A Novel Fucose-binding Lectin from Photorhabdus luminescens (PLL) with an Unusual Heptabladed beta-Propeller Tetrameric Structure.
J.Biol.Chem., 291, 2016
5UYN
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BU of 5uyn by Molmil
70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Loveland, A.B, Demo, G, Grigorieff, N, Korostelev, A.A.
登録日2017-02-24
公開日2017-06-07
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Ensemble cryo-EM elucidates the mechanism of translation fidelity
Nature, 546, 2017
5UYM
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BU of 5uym by Molmil
70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Loveland, A.B, Demo, G, Grigorieff, N, Korostelev, A.A.
登録日2017-02-24
公開日2017-06-07
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Ensemble cryo-EM elucidates the mechanism of translation fidelity
Nature, 546, 2017
5UYQ
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BU of 5uyq by Molmil
70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Loveland, A.B, Demo, G, Grigorieff, N, Korostelev, A.A.
登録日2017-02-24
公開日2017-06-07
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Ensemble cryo-EM elucidates the mechanism of translation fidelity
Nature, 546, 2017
8DG7
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BU of 8dg7 by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex III
分子名称: Endoribonuclease Dcr-1, Loquacious, isoform B, ...
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
8DFV
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BU of 8dfv by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex IIa
分子名称: CALCIUM ION, Endoribonuclease Dcr-1, Loquacious, ...
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-22
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
7TOR
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BU of 7tor by Molmil
Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Loveland, A.B, Svidritskiy, E, Susorov, D, Lee, S, Park, A, Zvornicanin, S, Demo, G, Gao, F.B, Korostelev, A.A.
登録日2022-01-24
公開日2022-05-25
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM.
Nat Commun, 13, 2022
7TOQ
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BU of 7toq by Molmil
Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Loveland, A.B, Svidritskiy, E, Susorov, D, Lee, S, Park, A, Zvornicanin, S, Demo, G, Gao, F.B, Korostelev, A.A.
登録日2022-01-24
公開日2022-05-25
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM.
Nat Commun, 13, 2022
8DGA
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BU of 8dga by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex IV
分子名称: Endoribonuclease Dcr-1, Loquacious, isoform B, ...
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.73 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
8DGJ
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BU of 8dgj by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex Ib
分子名称: Endoribonuclease Dcr-1, Loquacious, isoform B
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.02 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
8DGI
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BU of 8dgi by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex Ia
分子名称: Endoribonuclease Dcr-1, Loquacious, isoform B
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.94 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022

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件を2024-07-24に公開中

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