Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 142 件

3M6V
DownloadVisualize
BU of 3m6v by Molmil
Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus in space group P2 in complex with S-Adenosyl-L-Methionine
分子名称: S-ADENOSYLMETHIONINE, rRNA methylase
著者Demirci, H, Larsen, H.G.L, Hansen, T, Rasmussen, A, Cadambi, A, Gregory, S.T, Kirpekar, F, Jogl, G.
登録日2010-03-16
公開日2010-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus.
Rna, 16, 2010
3M6W
DownloadVisualize
BU of 3m6w by Molmil
Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus in space group P21212 in complex with S-Adenosyl-L-Methionine
分子名称: CHLORIDE ION, S-ADENOSYLMETHIONINE, rRNA methylase
著者Demirci, H, Larsen, H.G.L, Hansen, T, Rasmussen, A, Cadambi, A, Gregory, S.T, Kirpekar, F, Jogl, G.
登録日2010-03-16
公開日2010-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus.
Rna, 16, 2010
3M6X
DownloadVisualize
BU of 3m6x by Molmil
Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus in space group P21212
分子名称: CHLORIDE ION, rRNA methylase
著者Demirci, H, Larsen, H.G.L, Hansen, T, Rasmussen, A, Cadambi, A, Gregory, S.T, Kirpekar, F, Jogl, G.
登録日2010-03-16
公開日2010-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.676 Å)
主引用文献Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus.
Rna, 16, 2010
4DV2
DownloadVisualize
BU of 4dv2 by Molmil
Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A
分子名称: 16S rRNA, MAGNESIUM ION, ZINC ION, ...
著者Demirci, H, Murphy IV, F, Murphy, E, Gregory, S.T, Dahlberg, A.E, Jogl, G.
登録日2012-02-22
公開日2013-02-27
実験手法X-RAY DIFFRACTION (3.646 Å)
主引用文献A structural basis for streptomycin resistance
To be Published
6NA4
DownloadVisualize
BU of 6na4 by Molmil
Co crystal structure of ECR with Butryl-CoA
分子名称: 9-ETHYL-9H-PURIN-6-YLAMINE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者DeMirci, H.
登録日2018-12-05
公開日2020-03-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.722 Å)
主引用文献Intersubunit Coupling Enables Fast CO2-Fixation by Reductive Carboxylases
Acs Cent.Sci., 2022
6CAO
DownloadVisualize
BU of 6cao by Molmil
Structure of the ribosomal decoding complex at ambient temperature
分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者DeMirci, H.
登録日2018-01-31
公開日2018-07-25
最終更新日2019-04-17
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Structure of the 30S ribosomal decoding complex at ambient temperature.
RNA, 24, 2018
6NA5
DownloadVisualize
BU of 6na5 by Molmil
Crystal Structure of ECR in complex with NADP+
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative crotonyl-CoA reductase
著者DeMirci, H.
登録日2018-12-05
公開日2019-12-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Intersubunit Coupling Enables Fast CO2-Fixation by Reductive Carboxylases
Acs Cent.Sci., 2022
6CAS
DownloadVisualize
BU of 6cas by Molmil
Serial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with N1MS
分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者DeMirci, H.
登録日2018-01-31
公開日2018-07-25
最終更新日2018-10-24
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Aminoglycoside ribosome interactions reveal novel conformational states at ambient temperature.
Nucleic Acids Res., 46, 2018
2NXE
DownloadVisualize
BU of 2nxe by Molmil
T. thermophilus ribosomal protein L11 methyltransferase (PrmA) in complex with S-Adenosyl-L-Methionine
分子名称: Ribosomal protein L11 methyltransferase, S-ADENOSYLMETHIONINE
著者Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
登録日2006-11-17
公開日2006-12-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Recognition of ribosomal protein L11 by the protein trimethyltransferase PrmA.
Embo J., 26, 2007
6CAP
DownloadVisualize
BU of 6cap by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with Sisomicin
分子名称: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, ...
著者DeMirci, H.
登録日2018-01-31
公開日2018-07-25
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with Sisomicin
To Be Published
5WNS
DownloadVisualize
BU of 5wns by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
5WNT
DownloadVisualize
BU of 5wnt by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: (1R,2S,3S,4R,6R)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-alpha-L-altropyranosyl)-beta-L-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-allopyranoside, 16S Ribosomal RNA rRNA, MAGNESIUM ION, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
5WNP
DownloadVisualize
BU of 5wnp by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
5WNV
DownloadVisualize
BU of 5wnv by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: (1R,2S,3S,4R,6R)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-alpha-L-altropyranosyl)-beta-L-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-allopyranoside, 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
5WNR
DownloadVisualize
BU of 5wnr by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
5WNQ
DownloadVisualize
BU of 5wnq by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
2NXJ
DownloadVisualize
BU of 2nxj by Molmil
T.thermophilus ribosomal protein L11 methyltransferase (PrmA) in space group P 21 21 2
分子名称: Ribosomal protein L11 methyltransferase
著者Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
登録日2006-11-17
公開日2006-12-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Recognition of ribosomal protein L11 by the protein trimethyltransferase PrmA.
Embo J., 26, 2007
2NXN
DownloadVisualize
BU of 2nxn by Molmil
T. thermophilus ribosomal protein L11 methyltransferase (PrmA) in complex with ribosomal protein L11
分子名称: 50S ribosomal protein L11, Ribosomal protein L11 methyltransferase
著者Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
登録日2006-11-17
公開日2006-12-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Recognition of ribosomal protein L11 by the protein trimethyltransferase PrmA.
Embo J., 26, 2007
4X3L
DownloadVisualize
BU of 4x3l by Molmil
Crystal Structure of TTHA0275 from Thermus thermophilus (HB8) in complex with 5'-methylthioadenosine in space group P21212
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, CHLORIDE ION, RNA 2'-O ribose methyltransferase
著者Demirci, H, Belardinelli, R, Jogl, G.
登録日2014-12-01
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of TTHA0275 from Thermus thermophilus (HB8)
To Be Published
4X3M
DownloadVisualize
BU of 4x3m by Molmil
Crystal Structure of TTHA0275 from Thermus thermophilus (HB8) in complex with Adenosine in space group P212121
分子名称: ADENOSINE, PHOSPHATE ION, POTASSIUM ION, ...
著者Demirci, H, Belardinelli, R, Jogl, G.
登録日2014-12-01
公開日2015-11-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献Crystal Structure of TTHA0275 from Thermus thermophilus (HB8)
To Be Published
7VJZ
DownloadVisualize
BU of 7vjz by Molmil
Crystal Structure of SARS-CoV-2 Mpro at 1.90 A resolution-7
分子名称: 3C-like proteinase
著者DeMirci, H, Tokay, N.
登録日2021-09-29
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
7VK0
DownloadVisualize
BU of 7vk0 by Molmil
Crystal Structure of SARS-CoV-2 Mpro at 2.10 A resolution-6
分子名称: 3C-like proteinase
著者DeMirci, H, Cakilkaya, B.
登録日2021-09-29
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
7VK7
DownloadVisualize
BU of 7vk7 by Molmil
Crystal Structure of SARS-CoV-2 Mpro at 2.4 A resolution-11
分子名称: 3C-like proteinase
著者DeMirci, H, Dag, C.
登録日2021-09-29
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
7VK2
DownloadVisualize
BU of 7vk2 by Molmil
Crystal Structure of SARS-CoV-2 Mpro at 2.0 A resolution -9
分子名称: 3C-like proteinase
著者DeMirci, H, Gul, M.
登録日2021-09-29
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021
7VK1
DownloadVisualize
BU of 7vk1 by Molmil
Crystal Structure of SARS-CoV-2 Mpro at 1.93 A resolution-5
分子名称: 3C-like proteinase
著者DeMirci, H, Ertem, B.
登録日2021-09-29
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography
Crystals, 11, 2021

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon