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PDB: 14 件

4UV0
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BU of 4uv0 by Molmil
Structure of a semisynthetic phosphorylated DAPK
分子名称: DEATH-ASSOCIATED PROTEIN KINASE 1, TRIETHYLENE GLYCOL
著者de Diego, I, Rios, P, Meyer, C, Koehn, M, Wilmanns, M.
登録日2014-08-01
公開日2015-08-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Molecular Mechanisms Behind Dapk Regulation: How the Phosphorylation Activity Switch Works
To be Published
2W4K
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BU of 2w4k by Molmil
X-ray structure of a DAP-Kinase 2-302
分子名称: ADENOSINE-5'-DIPHOSPHATE, DEATH-ASSOCIATED PROTEIN KINASE 1, MAGNESIUM ION
著者De Diego, I, Kuper, J, Lehmann, F, Wilmanns, M.
登録日2008-11-27
公開日2009-12-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Pef/Y Substrate Recognition and Signature Motif Plays a Critical Role in Dapk-Related Kinase Activity.
Chem.Biol., 21, 2014
5AG9
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BU of 5ag9 by Molmil
CRYSTAL STRUCTURE OF A MUTANT (665sXa) C-TERMINAL DOMAIN OF RGPB
分子名称: Gingipain R2, SULFATE ION
著者de Diego, I, Ksiazek, M, Mizgalska, D, Golik, P, Szmigielski, B, Nowak, M, Nowakowska, Z, Potempa, B, Koneru, L, Nguyen, K.A, Enghild, J, Thogersen, I.B, Dubin, G, Gomis-Ruth, F.X, Potempa, J.
登録日2015-01-29
公開日2016-04-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献The outer-membrane export signal of Porphyromonas gingivalis type IX secretion system (T9SS) is a conserved C-terminal beta-sandwich domain.
Sci Rep, 6, 2016
5AG8
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BU of 5ag8 by Molmil
CRYSTAL STRUCTURE OF A MUTANT (665I6H) OF THE C-TERMINAL DOMAIN OF RGPB
分子名称: GINGIPAIN R2, GLYCEROL, SULFATE ION
著者de Diego, I, Ksiazek, M, Mizgalska, D, Golik, P, Szmigielski, B, Nowak, M, Nowakowska, Z, Potempa, B, Koneru, L, Nguyen, K.A, Enghild, J, Thogersen, I.B, Dubin, G, Gomis-Ruth, F.X, Potempa, J.
登録日2015-01-29
公開日2016-04-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Outer-Membrane Export Signal of Porphyromonas Gingivalis Type Ix Secretion System (T9Ss) is a Conserved C-Terminal Beta-Sandwich Domain.
Sci.Rep., 6, 2016
4RBM
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BU of 4rbm by Molmil
Porphyromonas gingivalis gingipain K (Kgp) catalytic and immunoglobulin superfamily-like domains
分子名称: (3S)-3,7-diaminoheptan-2-one, ACETATE ION, AZIDE ION, ...
著者de Diego, I, Veillard, F, Sztukowska, M.N, Guevara, T, Potempa, B, Pomowski, A, Huntington, J.A, Potempa, J, Gomis-Ruth, F.X.
登録日2014-09-12
公開日2014-10-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and Mechanism of Cysteine Peptidase Gingipain K (Kgp), a Major Virulence Factor of Porphyromonas gingivalis in Periodontitis.
J.Biol.Chem., 289, 2014
3ZXT
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BU of 3zxt by Molmil
Dimeric structure of DAPK-1 catalytic domain in complex with AMPPCP- Mg
分子名称: DEATH-ASSOCIATED PROTEIN KINASE 1, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
著者de Diego, I, Lehmann, F, Wilmanns, M.
登録日2011-08-15
公開日2012-07-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A Journey Through the Dap Kinase Architecture
To be Published
2W4J
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BU of 2w4j by Molmil
X-ray structure of a DAP-Kinase 2-277
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, DEATH-ASSOCIATED PROTEIN KINASE 1, ...
著者De Diego, I, Kuper, J, Lehmann, F, Wilmanns, M.
登録日2008-11-27
公開日2009-12-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献X-Ray Structure of a Dap-Kinase Calmodulin Complex
To be Published
2Y4V
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BU of 2y4v by Molmil
CRYSTAL STRUCTURE OF HUMAN CALMODULIN IN COMPLEX WITH A DAP KINASE-1 MUTANT (W305Y) PEPTIDE
分子名称: CALCIUM ION, CALMODULIN, DEATH-ASSOCIATED PROTEIN KINASE 1,
著者de Diego, I, Lehmann, F, Wilmanns, M.
登録日2011-01-11
公開日2011-12-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Journey Through the Dap Kinase Architecture
To be Published
2Y4P
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BU of 2y4p by Molmil
Dimeric structure of DAPK-1 catalytic domain
分子名称: DEATH-ASSOCIATED PROTEIN KINASE 1
著者de Diego, I, Lehmann, F, Wilmanns, M.
登録日2011-01-07
公開日2012-01-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A Journey Through the Dap Kinase Architecture
To be Published
2XUU
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BU of 2xuu by Molmil
Crystal structure of a DAP-kinase 1 mutant
分子名称: ADENOSINE-5'-DIPHOSPHATE, DEATH-ASSOCIATED PROTEIN KINASE 1, MAGNESIUM ION, ...
著者de Diego, I, Kuper, J, Lehmann, F, Wilmanns, M.
登録日2010-10-21
公開日2011-11-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Pef/Y Substrate Recognition and Signature Motif Plays a Critical Role in Dapk-Related Kinase Activity.
Chem.Biol., 21, 2014
4IEF
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BU of 4ief by Molmil
Complex of Porphyromonas gingivalis RgpB pro- and mature domains
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BARIUM ION, CALCIUM ION, ...
著者de Diego, I, Veillard, F.T, Guevara, T, Potempa, B, Sztukowska, M, Potempa, J, Gomis-Ruth, F.X.
登録日2012-12-13
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Porphyromonas gingivalis Virulence Factor Gingipain RgpB Shows a Unique Zymogenic Mechanism for Cysteine Peptidases.
J.Biol.Chem., 288, 2013
7T8I
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BU of 7t8i by Molmil
Crystal structure of the ImmR transcriptional regulator DNA-binding domain of Bacillus subtilis
分子名称: Phage element (ICEBs1)transcriptional regulator (Xre family)
著者Caliandro, R, de Diego, I, Gomis-Ruth, F.X.
登録日2021-12-16
公開日2022-03-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure report of the ImmR transcriptional regulator DNA-binding domain of the Bacillus subtilis ICEBs1 transposon.
Sci Rep, 12, 2022
2X0G
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BU of 2x0g by Molmil
X-RAY STRUCTURE OF A DAP-KINASE CALMODULIN COMPLEX
分子名称: CALCIUM ION, CALMODULIN, DEATH-ASSOCIATED PROTEIN KINASE 1, ...
著者Kuper, J, De Diego, I, Lehmann, F, Wilmanns, M.
登録日2009-12-08
公開日2010-01-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular Basis of the Death-Associated Protein Kinase-Calcium/Calmodulin Regulator Complex.
Sci.Signal, 3, 2010
4IN9
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BU of 4in9 by Molmil
Structure of karilysin MMP-like catalytic domain in complex with inhibitory tetrapeptide SWFP
分子名称: GLYCEROL, Karilysin protease, POTASSIUM ION, ...
著者Guevara, T, Ksiazek, M, Skottrup, P.D, Cerda-Costa, N, Trillo-Muyo, S, de Diego, I, Riise, E, Potempa, J, Gomis-Ruth, F.X.
登録日2013-01-04
公開日2013-05-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure of the catalytic domain of the Tannerella forsythia matrix metallopeptidase karilysin in complex with a tetrapeptidic inhibitor.
Acta Crystallogr.,Sect.F, 69, 2013

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件を2024-06-26に公開中

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