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PDB: 270 件

1RO2
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Bifunctional DNA primase/polymerase domain of ORF904 from the archaeal plasmid pRN1- Triple mutant F50M/L107M/L110M manganese soak
分子名称: MANGANESE (II) ION, ZINC ION, hypothetical protein ORF904
著者Lipps, G, Weinzierl, A.O, von Scheven, G, Buchen, C, Cramer, P.
登録日2003-12-01
公開日2004-01-27
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of a bifunctional DNA primase-polymerase
Nat.Struct.Mol.Biol., 11, 2004
1T9Z
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Three-dimensional structure of a RNA-polymerase II binding protein.
分子名称: CITRIC ACID, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, MAGNESIUM ION
著者Kamenski, T, Heilmeier, S, Meinhart, A, Cramer, P.
登録日2004-05-19
公開日2004-08-31
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Mechanism of RNA Polymerase II CTD Phosphatases.
Mol.Cell, 15, 2004
1SZ9
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The RNA polymerase II CTD in mRNA processing: beta-turn recognition and beta-spiral model
分子名称: PCF11 protein
著者Meinhart, A, Cramer, P.
登録日2004-04-05
公開日2004-07-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Recognition of RNA polymerase II carboxy-terminal domain by 3'-RNA-processing factors.
Nature, 430, 2004
1TA0
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BU of 1ta0 by Molmil
Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand.
分子名称: CITRIC ACID, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, MAGNESIUM ION
著者Kamenski, T, Heilmeier, S, Meinhart, T, Cramer, P.
登録日2004-05-19
公開日2004-08-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and Mechanism of RNA Polymerase II CTD Phosphatases.
Mol.Cell, 15, 2004
6RFL
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BU of 6rfl by Molmil
Structure of the complete Vaccinia DNA-dependent RNA polymerase complex
分子名称: DNA-dependent RNA polymerase subunit rpo132, DNA-dependent RNA polymerase subunit rpo147, DNA-dependent RNA polymerase subunit rpo18, ...
著者Grimm, C, Hillen, S.H, Bedenk, K, Bartuli, J, Neyer, S, Zhang, Q, Huettenhofer, A, Erlacher, M, Dienemann, C, Schlosser, A, Urlaub, H, Boettcher, B, Szalay, A.A, Cramer, P, Fischer, U.
登録日2019-04-15
公開日2019-12-11
最終更新日2019-12-25
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Structural Basis of Poxvirus Transcription: Vaccinia RNA Polymerase Complexes.
Cell, 179, 2019
3QWD
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BU of 3qwd by Molmil
Crystal structure of ClpP from Staphylococcus aureus
分子名称: ATP-dependent Clp protease proteolytic subunit, CHLORIDE ION
著者Geiger, S.R, Boettcher, T, Sieber, S.A, Cramer, P.
登録日2011-02-28
公開日2011-05-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Conformational Switch Underlies ClpP Protease Function.
Angew.Chem.Int.Ed.Engl., 50, 2011
6T9L
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SAGA DUB module bound to a ubiqitinated nucleosome
分子名称: Histone H2A, Histone H2B, Histone H2B 1.1, ...
著者Wang, H, Cramer, P.
登録日2019-10-28
公開日2020-01-29
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure of the transcription coactivator SAGA.
Nature, 577, 2020
6TDA
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Structure of SWI/SNF chromatin remodeler RSC bound to a nucleosome
分子名称: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC58, ...
著者Wagner, F.R, Dienemann, C, Wang, H, Stuetzer, A, Tegunov, D, Urlaub, H, Cramer, P.
登録日2019-11-08
公開日2020-03-18
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献Structure of SWI/SNF chromatin remodeller RSC bound to a nucleosome.
Nature, 579, 2020
1YKE
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Structure of the mediator MED7/MED21 subcomplex
分子名称: RNA polymerase II holoenzyme component SRB7, RNA polymerase II mediator complex protein MED7
著者Baumli, S, Hoeppner, S, Cramer, P.
登録日2005-01-18
公開日2005-02-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献A conserved mediator hinge revealed in the structure of the MED7.MED21 (Med7.Srb7) heterodimer.
J.Biol.Chem., 280, 2005
6RYU
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Nucleosome-CHD4 complex structure (two CHD4 copies)
分子名称: Chromodomain-helicase-DNA-binding protein 4,CHD4,Chromodomain-helicase-DNA-binding protein 4, DNA (149-MER), Histone H2A type 1, ...
著者Farnung, L, Ochmann, M, Cramer, P.
登録日2019-06-12
公開日2020-07-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Nucleosome-CHD4 chromatin remodeller structure maps human disease mutations.
Elife, 9, 2020
3QT1
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RNA polymerase II variant containing A Chimeric RPB9-C11 subunit
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Ruan, W, Lehmann, E, Thomm, M, Kostrewa, D, Cramer, P.
登録日2011-02-22
公開日2011-03-23
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Evolution of two modes of intrinsic RNA polymerase transcript cleavage.
J.Biol.Chem., 286, 2011
6RO4
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BU of 6ro4 by Molmil
Structure of the core TFIIH-XPA-DNA complex
分子名称: DNA repair protein complementing XP-A cells, DNA1, DNA2, ...
著者Kokic, G, Chernev, A, Tegunov, D, Dienemann, C, Urlaub, H, Cramer, P.
登録日2019-05-10
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis of TFIIH activation for nucleotide excision repair.
Nat Commun, 10, 2019
3M1M
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BU of 3m1m by Molmil
Crystal structure of the primase-polymerase from Sulfolobus islandicus
分子名称: GLYCEROL, ORF904, SULFATE ION, ...
著者Vannini, A, Beck, K, Lipps, G, Cramer, P.
登録日2010-03-05
公開日2010-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The archaeo-eukaryotic primase of plasmid pRN1 requires a helix bundle domain for faithful primer synthesis
Nucleic Acids Res., 38, 2010
7PET
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The 4x177 nucleosome array containing H1
分子名称: DNA (702-MER), Histone H1.4, Histone H2A type 1-B/E, ...
著者Dombrowski, M, Cramer, P.
登録日2021-08-11
公開日2022-08-03
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7O75
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BU of 7o75 by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with open promoter DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ...
著者Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P.
登録日2021-04-13
公開日2021-06-16
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening.
Cell, 184, 2021
7O4L
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BU of 7o4l by Molmil
Yeast TFIIH in the expanded state within the pre-initiation complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ...
著者Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P.
登録日2021-04-06
公開日2021-06-16
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening.
Cell, 184, 2021
7O4K
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BU of 7o4k by Molmil
Yeast TFIIH in the contracted state within the pre-initiation complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ...
著者Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P.
登録日2021-04-06
公開日2021-06-16
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening.
Cell, 184, 2021
7O72
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BU of 7o72 by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with closed promoter DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ...
著者Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P.
登録日2021-04-12
公開日2021-06-16
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening.
Cell, 184, 2021
3GXX
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BU of 3gxx by Molmil
Structure of the SH2 domain of the Candida glabrata transcription elongation factor Spt6, crystal form B
分子名称: Transcription elongation factor SPT6
著者Dengl, S, Mayer, A, Sun, M, Cramer, P.
登録日2009-04-03
公開日2009-05-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and in vivo requirement of the yeast Spt6 SH2 domain
J.Mol.Biol., 389, 2009
6RYR
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BU of 6ryr by Molmil
Nucleosome-CHD4 complex structure (single CHD4 copy)
分子名称: Chromodomain-helicase-DNA-binding protein 4,Chromodomain-helicase-DNA-binding protein 4,Chromodomain-helicase-DNA-binding protein 4, DNA (149-MER), Histone H2A type 1, ...
著者Farnung, L, Ochmann, M, Cramer, P.
登録日2019-06-11
公開日2020-07-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Nucleosome-CHD4 chromatin remodeller structure maps human disease mutations.
Elife, 9, 2020
3GXW
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BU of 3gxw by Molmil
Structure of the SH2 domain of the Candida glabrata transcription elongation factor Spt6, crystal form A
分子名称: SODIUM ION, SUCCINIC ACID, Transcription elongation factor SPT6
著者Dengl, S, Mayer, A, Sun, M, Cramer, P.
登録日2009-04-03
公開日2009-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and in vivo requirement of the yeast Spt6 SH2 domain
J.Mol.Biol., 389, 2009
6S01
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Structure of LEDGF PWWP domain bound H3K36 methylated nucleosome
分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ...
著者Wang, H, Farnung, L, Dienemann, C, Cramer, P.
登録日2019-06-13
公開日2019-12-18
最終更新日2020-01-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of H3K36-methylated nucleosome-PWWP complex reveals multivalent cross-gyre binding.
Nat.Struct.Mol.Biol., 27, 2020
7PEU
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BU of 7peu by Molmil
Trinucleosome of the 4x177 nucleosome array containing H1
分子名称: DNA (522-MER), Histone H1.4, Histone H2A type 1-B/E, ...
著者Dombrowski, M, Cramer, P.
登録日2021-08-11
公開日2022-08-03
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PF2
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Nucleosome stack of the 4x187 nucleosome array containing H1
分子名称: DNA (541-MER), Histone H1.4, Histone H2A type 1-B/E, ...
著者Dombrowski, M, Cramer, P.
登録日2021-08-11
公開日2022-08-03
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PFT
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Trinucleosome of the 4x207 nucleosome array containing H1
分子名称: DNA (591-MER), Histone H1.4, Histone H2A type 1-B/E, ...
著者Dombrowski, M, Cramer, P.
登録日2021-08-12
公開日2022-08-03
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022

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