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PDB: 47 results

2WCC
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phage lambda IntDBD1-64 complex with p prime 2 DNA
Descriptor: DNA (5'-D(*DCP*DGP*DAP*DGP*DTP*DCP*DAP *DAP*DAP*DAP*DTP*DC)-3'), DNA (5'-D(*DGP*DAP*DTP*DTP*DTP*DTP*DGP *DAP*DCP*DTP*DGP*DC)-3'), INTEGRASE
Authors:Fadeev, E.A, Sam, M.D, Clubb, R.T.
Deposit date:2009-03-11
Release date:2009-04-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of the Amino-Terminal Domain of the Lambda Integrase Protein in Complex with DNA: Immobilization of a Flexible Tail Facilitates Beta- Sheet Recognition of the Major Groove.
J.Mol.Biol., 388, 2009
4NLA
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BU of 4nla by Molmil
Structure of the central NEAT domain, N2, of the listerial Hbp2 protein, apo form
Descriptor: Iron-regulated surface determinant protein A, SULFATE ION
Authors:Malmirchegini, G.R, Sawaya, M.R, Clubb, R.T.
Deposit date:2013-11-14
Release date:2014-10-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Novel Mechanism of Hemin Capture by Hbp2, the Hemoglobin-binding Hemophore from Listeria monocytogenes.
J.Biol.Chem., 289, 2014
4MYP
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BU of 4myp by Molmil
Structure of the central NEAT domain, N2, of the listerial Hbp2 protein complexed with heme
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Malmirchegini, G.R, Sawaya, M.R, Clubb, R.T.
Deposit date:2013-09-27
Release date:2014-10-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Novel Mechanism of Hemin Capture by Hbp2, the Hemoglobin-binding Hemophore from Listeria monocytogenes.
J.Biol.Chem., 289, 2014
2OG0
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BU of 2og0 by Molmil
Crystal Structure of the Lambda Xis-DNA complex
Descriptor: 5'-D(*AP*AP*AP*CP*AP*GP*AP*CP*TP*AP*CP*AP*TP*AP*AP*TP*AP*C)-3', 5'-D(*GP*TP*AP*TP*TP*AP*TP*GP*TP*AP*GP*TP*CP*TP*GP*TP*TP*T)-3', Excisionase
Authors:Papagiannis, C.V, Sam, M.D, Abbani, M.A, Cascio, D, Yoo, D, Clubb, R.T, Johnson, R.C.
Deposit date:2007-01-04
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fis targets assembly of the xis nucleoprotein filament to promote excisive recombination by phage lambda.
J.Mol.Biol., 367, 2007
1C20
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BU of 1c20 by Molmil
SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN FROM THE DEAD RINGER PROTEIN
Descriptor: DEAD RINGER PROTEIN
Authors:Iwahara, J, Clubb, R.T.
Deposit date:1999-07-22
Release date:1999-11-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the DNA binding domain from Dead ringer, a sequence-specific AT-rich interaction domain (ARID).
EMBO J., 18, 1999
1Y6U
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BU of 1y6u by Molmil
The Structure of the Excisionase (Xis) Protein from Conjugative Transposon Tn916 Provides Insights into the Regulation of Heterobivalent Tyrosine Recombinases
Descriptor: Excisionase from transposon Tn916
Authors:Abbani, M, Iwahara, M, Clubb, R.T.
Deposit date:2004-12-07
Release date:2005-03-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of the excisionase (xis) protein from conjugative transposon tn916 provides insights into the regulation of heterobivalent tyrosine recombinases
J.Mol.Biol., 347, 2005
1QPM
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BU of 1qpm by Molmil
NMR STRUCTURE OF THE MU BACTERIOPHAGE REPRESSOR DNA-BINDING DOMAIN
Descriptor: PROTEIN (MU BACTERIOPHAGE C REPRESSOR PROTEIN)
Authors:Ilangovan, U, Wojciak, J.M, Connolly, K.M, Clubb, R.T.
Deposit date:1999-05-26
Release date:1999-06-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure and functional studies of the Mu repressor DNA-binding domain.
Biochemistry, 38, 1999
2EZI
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BU of 2ezi by Molmil
SOLUTION NMR STRUCTURE OF THE IGAMMA SUBDOMAIN OF THE MU END DNA BINDING DOMAIN OF MU PHAGE TRANSPOSASE, 30 STRUCTURES
Descriptor: TRANSPOSASE
Authors:Clore, G.M, Clubb, R.T, Schumaker, S, Gronenborn, A.M.
Deposit date:1997-07-25
Release date:1997-12-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the I gamma subdomain of the Mu end DNA-binding domain of phage Mu transposase.
J.Mol.Biol., 273, 1997
2EZH
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BU of 2ezh by Molmil
SOLUTION NMR STRUCTURE OF THE IGAMMA SUBDOMAIN OF THE MU END DNA BINDING DOMAIN OF MU PHAGE TRANSPOSASE, MINIMIZED AVERAGE STRUCTURE
Descriptor: TRANSPOSASE
Authors:Clore, G.M, Clubb, R.T, Schumaker, S, Gronenborn, A.M.
Deposit date:1997-07-25
Release date:1997-12-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the I gamma subdomain of the Mu end DNA-binding domain of phage Mu transposase.
J.Mol.Biol., 273, 1997
2EZK
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BU of 2ezk by Molmil
SOLUTION NMR STRUCTURE OF THE IBETA SUBDOMAIN OF THE MU END DNA BINDING DOMAIN OF PHAGE MU TRANSPOSASE, REGULARIZED MEAN STRUCTURE
Descriptor: TRANSPOSASE
Authors:Clore, G.M, Clubb, R.T, Schumaker, S, Gronenborn, A.M.
Deposit date:1997-10-04
Release date:1998-01-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Mu end DNA-binding ibeta subdomain of phage Mu transposase: modular DNA recognition by two tethered domains.
EMBO J., 16, 1997
2EZL
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BU of 2ezl by Molmil
SOLUTION NMR STRUCTURE OF THE IBETA SUBDOMAIN OF THE MU END DNA BINDING DOMAIN OF PHAGE MU TRANSPOSASE, 29 STRUCTURES
Descriptor: TRANSPOSASE
Authors:Clore, G.M, Clubb, R.T, Schumaker, S, Gronenborn, A.M.
Deposit date:1997-10-04
Release date:1998-01-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Mu end DNA-binding ibeta subdomain of phage Mu transposase: modular DNA recognition by two tethered domains.
EMBO J., 16, 1997
2IEF
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BU of 2ief by Molmil
Structure of the cooperative Excisionase (Xis)-DNA complex reveals a micronucleoprotein filament
Descriptor: 15-mer DNA, 19-mer DNA, 34-mer DNA, ...
Authors:Abbani, M.A, Papagiannis, C.V, Sam, M.D, Cascio, D, Johnson, R.C, Clubb, R.T.
Deposit date:2006-09-18
Release date:2007-02-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Structure of the cooperative Xis-DNA complex reveals a micronucleoprotein filament that regulates phage lambda intasome assembly.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2H3K
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BU of 2h3k by Molmil
Solution Structure of the first NEAT domain of IsdH
Descriptor: Haptoglobin-binding surface anchored protein
Authors:Pilpa, R.M, Fadeev, E.A, Villareal, V.A, Wong, M.A, Phillips, M, Clubb, R.T.
Deposit date:2006-05-22
Release date:2006-08-22
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution structure of the NEAT (NEAr Transporter) domain from IsdH/HarA: the human hemoglobin receptor in Staphylococcus aureus.
J.Mol.Biol., 360, 2006
2KID
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BU of 2kid by Molmil
Solution Structure of the S. Aureus Sortase A-substrate Complex
Descriptor: (PHQ)LPA(B27) peptide, CALCIUM ION, Sortase
Authors:Suree, N, Liew, C.K, Villareal, V.A, Thieu, W, Fadeev, E.A, Clemens, J.J, Jung, M.E, Clubb, R.T.
Deposit date:2009-05-01
Release date:2009-07-21
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:The structure of the Staphylococcus aureus sortase-substrate complex reveals how the universally conserved LPXTG sorting signal is recognized.
J.Biol.Chem., 284, 2009
2K78
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BU of 2k78 by Molmil
Solution Structure of the IsdC NEAT domain bound to Zinc Protoporphyrin
Descriptor: Iron-regulated surface determinant protein C, PROTOPORPHYRIN IX CONTAINING ZN
Authors:Villareal, V.A, Pilpa, R.M, Robson, S.A, Fadeev, E.A, Clubb, R.T.
Deposit date:2008-08-06
Release date:2008-08-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The IsdC Protein from Staphylococcus aureus Uses a Flexible Binding Pocket to Capture Heme.
J.Biol.Chem., 283, 2008
1IJA
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BU of 1ija by Molmil
Structure of Sortase
Descriptor: Sortase
Authors:Ilangovan, U, Ton-That, H, Iwahara, J, Schneewind, O, Clubb, R.T.
Deposit date:2001-04-25
Release date:2001-05-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of sortase, the transpeptidase that anchors proteins to the cell wall of Staphylococcus aureus.
Proc.Natl.Acad.Sci.USA, 98, 2001
1G4D
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BU of 1g4d by Molmil
NMR STRUCTURE OF THE MU BACTERIOPHAGE REPRESSOR DNA-BINDING DOMAIN/DNA COMPLEX
Descriptor: 5'-D(P*CP*AP*GP*AP*TP*TP*AP*CP*TP*GP*AP*AP*AP*AP*GP*G)-3', 5'-D(P*CP*CP*TP*TP*TP*TP*CP*AP*GP*TP*AP*AP*TP*CP*TP*G)-3', REPRESSOR PROTEIN C
Authors:Wojciak, J.M, Iwahara, J, Clubb, R.T.
Deposit date:2000-10-26
Release date:2000-11-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The Mu repressor-DNA complex contains an immobilized 'wing' within the minor groove.
Nat.Struct.Biol., 8, 2001
1KQQ
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BU of 1kqq by Molmil
Solution Structure of the Dead ringer ARID-DNA Complex
Descriptor: 5'-D(*CP*CP*AP*CP*AP*TP*CP*AP*AP*TP*AP*CP*AP*GP*G)-3', 5'-D(*CP*CP*TP*GP*TP*AP*TP*TP*GP*AP*TP*GP*TP*GP*G)-3', DEAD RINGER PROTEIN
Authors:Iwahara, J, Iwahara, M, Daughdrill, G.W, Ford, J, Clubb, R.T.
Deposit date:2002-01-07
Release date:2002-03-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of the Dead ringer-DNA complex reveals how AT-rich interaction domains (ARIDs) recognize DNA.
EMBO J., 21, 2002
1KJK
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Solution structure of the lambda integrase amino-terminal domain
Descriptor: integrase
Authors:Wojciak, J.M, Sarkar, D, Landy, A, Clubb, R.T.
Deposit date:2001-12-04
Release date:2002-03-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Arm-site binding by lambda -integrase: solution structure and functional characterization of its amino-terminal domain.
Proc.Natl.Acad.Sci.USA, 99, 2002
1RH6
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BU of 1rh6 by Molmil
Bacteriophage Lambda Excisionase (Xis)-DNA Complex
Descriptor: 5'-D(*CP*TP*AP*TP*GP*TP*AP*GP*TP*CP*TP*GP*TP*TP*G)-3', 5'-D(P*CP*AP*AP*CP*AP*GP*AP*CP*TP*AP*CP*AP*TP*AP*G)-3', Excisionase
Authors:Sam, M.D, Cascio, D, Johnson, R.C, Clubb, R.T.
Deposit date:2003-11-13
Release date:2004-06-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the excisionase-DNA complex from bacteriophage lambda.
J.Mol.Biol., 338, 2004
1TNT
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A NOVEL CLASS OF WINGED HELIX-TURN-HELIX PROTEIN: THE DNA-BINDING DOMAIN OF MU TRANSPOSASE
Descriptor: MU-TRANSPOSASE
Authors:Clore, G.M, Clubb, R.T, Omichinski, J.G, Gronenborn, A.M.
Deposit date:1994-10-10
Release date:1995-02-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A novel class of winged helix-turn-helix protein: the DNA-binding domain of Mu transposase.
Structure, 2, 1994
1TNS
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BU of 1tns by Molmil
A NOVEL CLASS OF WINGED HELIX-TURN-HELIX PROTEIN: THE DNA-BINDING DOMAIN OF MU TRANSPOSASE
Descriptor: MU-TRANSPOSASE
Authors:Clore, G.M, Clubb, R.T, Omichinski, J.G, Gronenborn, A.M.
Deposit date:1994-10-10
Release date:1995-02-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A novel class of winged helix-turn-helix protein: the DNA-binding domain of Mu transposase.
Structure, 2, 1994
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