Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 30 件

2X2F
DownloadVisualize
BU of 2x2f by Molmil
Dynamin 1 GTPase dimer, short axis form
分子名称: DYNAMIN-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Chappie, J.S, Acharya, S, Leonard, M, Schmid, S.L, Dyda, F.
登録日2010-01-13
公開日2010-04-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献G Domain Dimerization Controls Dynamin'S Assembly-Stimulated Gtpase Activity.
Nature, 465, 2010
3ZYS
DownloadVisualize
BU of 3zys by Molmil
Human dynamin 1 deltaPRD polymer stabilized with GMPPCP
分子名称: DYNAMIN-1, INTERFERON-INDUCED GTP-BINDING PROTEIN MX1
著者Chappie, J.S, Mears, J.A, Fang, S, Leonard, M, Schmid, S.L, Milligan, R.A, Hinshaw, J.E, Dyda, F.
登録日2011-08-24
公開日2011-10-12
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (12.2 Å)
主引用文献A Pseudoatomic Model of the Dynamin Polymer Identifies a Hydrolysis-Dependent Powerstroke.
Cell(Cambridge,Mass.), 147, 2011
3ZYC
DownloadVisualize
BU of 3zyc by Molmil
DYNAMIN 1 GTPASE GED FUSION DIMER COMPLEXED WITH GMPPCP
分子名称: DYNAMIN-1, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
著者Chappie, J.S, Mears, J.A, Fang, S, Leonard, M, Schmid, S.L, Milligan, R.A, Hinshaw, J.E, Dyda, F.
登録日2011-08-22
公開日2011-10-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Pseudoatomic Model of the Dynamin Polymer Identifies a Hydrolysis-Dependent Powerstroke.
Cell(Cambridge,Mass.), 147, 2011
2X2E
DownloadVisualize
BU of 2x2e by Molmil
Dynamin GTPase dimer, long axis form
分子名称: DYNAMIN-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Chappie, J.S, Acharya, S, Leonard, M, Schmid, S.L, Dyda, F.
登録日2010-01-12
公開日2010-04-28
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献G Domain Dimerization Controls Dynamin'S Assembly-Stimulated Gtpase Activity.
Nature, 465, 2010
6P74
DownloadVisualize
BU of 6p74 by Molmil
OLD nuclease from Thermus Scotoductus
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, PLATINUM (II) ION, Putative ATP-dependent endonuclease of the OLD family, ...
著者Chappie, J.S, Schiltz, C.J.
登録日2019-06-04
公開日2020-01-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The full-length structure of Thermus scotoductus OLD defines the ATP hydrolysis properties and catalytic mechanism of Class 1 OLD family nucleases.
Nucleic Acids Res., 48, 2020
7RLM
DownloadVisualize
BU of 7rlm by Molmil
Crystal Structure of Potato Leafroll Virus (PLRV) Coat Protein
分子名称: BROMIDE ION, Coat protein
著者Adams, M.C, Chappie, J.S, Schiltz, C.J.
登録日2021-07-25
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the potato leafroll virus coat protein and implications for viral assembly.
J.Struct.Biol., 214, 2021
4UUK
DownloadVisualize
BU of 4uuk by Molmil
Human dynamin 1 K44A superconstricted polymer stabilized with GTP strand 2
分子名称: DYNAMIN-1
著者Sundborger, A.C, Fang, S, Heymann, J.A, Ray, P, Chappie, J.S, Hinshaw, J.E.
登録日2014-07-29
公開日2014-08-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (12.5 Å)
主引用文献A Dynamin Mutant Defines a Superconstricted Prefission State.
Cell Rep., 8, 2014
4UUD
DownloadVisualize
BU of 4uud by Molmil
Human dynamin 1 K44A superconstricted polymer stabilized with GTP
分子名称: DYNAMIN-1
著者Sundborger, A.C, Fang, S, Heymann, J.A, Ray, P, Chappie, J.S, Hinshaw, J.E.
登録日2014-07-25
公開日2014-08-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (12.5 Å)
主引用文献A Dynamin Mutant Defines a Superconstricted Prefission State.
Cell Rep., 8, 2014
8TWQ
DownloadVisualize
BU of 8twq by Molmil
Structure of bacteriophage lambda RexA protein
分子名称: CADMIUM ION, Protein rexA, SULFATE ION
著者Adams, M.C, Chappie, J.S, Schiltz, C.J.
登録日2023-08-21
公開日2024-04-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The crystal structure of bacteriophage lambda RexA provides novel insights into the DNA binding properties of Rex-like phage exclusion proteins.
Nucleic Acids Res., 52, 2024
7ULN
DownloadVisualize
BU of 7uln by Molmil
Turnip yellows virus N-terminal readthrough domain
分子名称: Minor capsid protein P3-RTD
著者Schiltz, C.J, Chappie, J.S.
登録日2022-04-05
公開日2022-11-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Polerovirus N-terminal readthrough domain structures reveal molecular strategies for mitigating virus transmission by aphids
Nat Commun, 13, 2022
7ULO
DownloadVisualize
BU of 7ulo by Molmil
Potato leafroll virus N-terminal readthrough domain
分子名称: Minor capsid protein P3-RTD, SULFATE ION
著者Schiltz, C.J, Chappie, J.S.
登録日2022-04-05
公開日2022-11-02
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Polerovirus N-terminal readthrough domain structures reveal molecular strategies for mitigating virus transmission by aphids
Nat Commun, 13, 2022
6DJQ
DownloadVisualize
BU of 6djq by Molmil
Vps1 GTPase-BSE fusion complexed with GDP.AlF4-
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SODIUM ION, ...
著者Varlakhanova, N.V, Brady, T.M, Tornabene, B.A, Hosford, C.J, Chappie, J.S, Ford, M.G.J.
登録日2018-05-25
公開日2018-08-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of the fungal dynamin-related protein Vps1 reveal a unique, open helical architecture.
J. Cell Biol., 217, 2018
6DEF
DownloadVisualize
BU of 6def by Molmil
Vps1 GTPase-BSE fusion complexed with GMPPCP
分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Vps1 GTPase-BSE
著者Ford, M.G.J, Varlakhanova, N.V, Brady, T.M, Chappie, J.S, Hosford, C.J.
登録日2018-05-11
公開日2018-08-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structures of the fungal dynamin-related protein Vps1 reveal a unique, open helical architecture.
J. Cell Biol., 217, 2018
6C5D
DownloadVisualize
BU of 6c5d by Molmil
N-terminal domain of Helicobacter pylori LlaJI.R1
分子名称: LlaJI.R1
著者Hosford, C.J, Chappie, J.S.
登録日2018-01-16
公開日2018-06-27
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献The crystal structure of theHelicobacter pyloriLlaJI.R1 N-terminal domain provides a model for site-specific DNA binding.
J. Biol. Chem., 293, 2018
6P0F
DownloadVisualize
BU of 6p0f by Molmil
N-terminal domain of Thermococcus Gammatolerans McrB
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AMMONIUM ION, GTPase subunit of restriction endonuclease, ...
著者Hosford, C.J, Chappie, J.S.
登録日2019-05-17
公開日2019-12-18
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.683 Å)
主引用文献The structure of theThermococcus gammatoleransMcrB N-terminal domain reveals a new mode of substrate recognition and specificity among McrB homologs.
J.Biol.Chem., 295, 2020
6P0G
DownloadVisualize
BU of 6p0g by Molmil
N-terminal domain of Thermococcus Gammatolerans McrB bound to m5C DNA
分子名称: DNA (5'-D(P*AP*CP*CP*GP*GP*T)-3'), DNA (5'-D(P*TP*AP*CP*CP*GP*G)-3'), GTPase subunit of restriction endonuclease
著者Hosford, C.J, Chappie, J.S.
登録日2019-05-17
公開日2019-12-18
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献The structure of theThermococcus gammatoleransMcrB N-terminal domain reveals a new mode of substrate recognition and specificity among McrB homologs.
J.Biol.Chem., 295, 2020
6OWO
DownloadVisualize
BU of 6owo by Molmil
CRYO-EM STRUCTURE OF PHOSPHORYLATED AP-2 CORE BOUND TO NECAP
分子名称: AP-2 complex subunit alpha-2, AP-2 complex subunit beta, AP-2 complex subunit mu, ...
著者Partlow, E.A, Baker, R.W, Beacham, G.M, Chappie, J.S, Leschziner, A.E, Hollopeter, G.
登録日2019-05-10
公開日2019-09-11
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A structural mechanism for phosphorylation-dependent inactivation of the AP2 complex.
Elife, 8, 2019
6N0S
DownloadVisualize
BU of 6n0s by Molmil
N-terminal domain of Staphylothermus marinus McrB
分子名称: ATPase associated with various cellular activities, AAA_5, SULFATE ION
著者Hosford, C.J, Niu, Y, Chappie, J.S.
登録日2018-11-07
公開日2019-11-13
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献The N-terminal domain of Staphylothermus marinus McrB shares structural homology with PUA-like RNA binding proteins.
J.Struct.Biol., 211, 2020
6NJX
DownloadVisualize
BU of 6njx by Molmil
C-terminal region of the Xanthomonas campestris pv. campestris OLD protein phased with mercury
分子名称: IODIDE ION, MERCURY (II) ION, Xcc_ctr_Hg
著者Schiltz, C.J, Lee, A, Partlow, E.A, Hosford, C.J, Chappie, J.S.
登録日2019-01-04
公開日2019-08-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural characterization of Class 2 OLD family nucleases supports a two-metal catalysis mechanism for cleavage.
Nucleic Acids Res., 47, 2019
6NK8
DownloadVisualize
BU of 6nk8 by Molmil
C-terminal region of the Burkholderia pseudomallei OLD protein
分子名称: Class 2 OLD family nuclease, MAGNESIUM ION
著者Schiltz, C.J, Lee, A, Partlow, E.A, Hosford, C.J, Chappie, J.S.
登録日2019-01-05
公開日2019-08-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structural characterization of Class 2 OLD family nucleases supports a two-metal catalysis mechanism for cleavage.
Nucleic Acids Res., 47, 2019
6NJW
DownloadVisualize
BU of 6njw by Molmil
C-terminal region of the Xanthomonas campestris pv. campestris OLD protein phased with platinum
分子名称: IODIDE ION, MAGNESIUM ION, PLATINUM (II) ION, ...
著者Schiltz, C.J, Lee, A, Partlow, E.A, Hosford, C.J, Chappie, J.S.
登録日2019-01-04
公開日2019-08-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structural characterization of Class 2 OLD family nucleases supports a two-metal catalysis mechanism for cleavage.
Nucleic Acids Res., 47, 2019
6NJV
DownloadVisualize
BU of 6njv by Molmil
C-terminal region of the Xanthomonas campestris pv. campestris OLD protein phased with iodine
分子名称: IODIDE ION, MAGNESIUM ION, Xcc_CTR_I
著者Schiltz, C.J, Lee, A, Partlow, E.A, Hosford, C.J, Chappie, J.S.
登録日2019-01-04
公開日2019-08-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural characterization of Class 2 OLD family nucleases supports a two-metal catalysis mechanism for cleavage.
Nucleic Acids Res., 47, 2019
6UT6
DownloadVisualize
BU of 6ut6 by Molmil
Cryo-EM structure of the Escherichia coli McrBC complex
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, ...
著者Niu, Y, Suzuki, H, Hosford, C.J, Chappie, J.S, Walz, T.
登録日2019-10-29
公開日2020-10-21
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes.
Nat Commun, 11, 2020
6UT3
DownloadVisualize
BU of 6ut3 by Molmil
X-ray structure of Thermococcus gammatolerans McrB AAA+ domain hexamer in P21 symmetry
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase subunit of restriction endonuclease, MAGNESIUM ION
著者Niu, Y, Hosford, C.J, Chappie, J.S.
登録日2019-10-29
公開日2020-10-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes.
Nat Commun, 11, 2020
6UT4
DownloadVisualize
BU of 6ut4 by Molmil
Cryo-EM structure of the asymmetric AAA+ domain hexamer from Thermococcus gammatolerans McrB
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase subunit of restriction endonuclease, MAGNESIUM ION
著者Niu, Y, Suzuki, H, Hosford, C.J, Chappie, J.S, Walz, T.
登録日2019-10-29
公開日2020-10-21
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes.
Nat Commun, 11, 2020

 

12>

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon