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PDB: 35 results

4DPV
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BU of 4dpv by Molmil
PARVOVIRUS/DNA COMPLEX
Descriptor: DNA (5'-D(*AP*TP*AP*CP*CP*TP*CP*TP*TP*GP*C)-3'), MAGNESIUM ION, PROTEIN (PARVOVIRUS COAT PROTEIN)
Authors:Chapman, M.S, Rossmann, M.G.
Deposit date:1996-02-01
Release date:1997-04-01
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Canine parvovirus capsid structure, analyzed at 2.9 A resolution.
J.Mol.Biol., 264, 1996
3J1S
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BU of 3j1s by Molmil
Structure of adeno-associated virus-2 in complex with neutralizing monoclonal antibody A20
Descriptor: A20 heavy chain, A20 light chain, Capsid protein VP1
Authors:Chapman, M.S, McCraw, D.M.
Deposit date:2012-05-23
Release date:2012-06-06
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:Structure of adeno-associated virus-2 in complex with neutralizing monoclonal antibody A20.
Virology, 431, 2012
1R09
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BU of 1r09 by Molmil
HUMAN RHINOVIRUS 14 COMPLEXED WITH ANTIVIRAL COMPOUND R 61837
Descriptor: 3-METHOXY-6-[4-(3-METHYLPHENYL)-1-PIPERAZINYL]PYRIDAZINE, DIMETHYL SULFOXIDE, HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP1), ...
Authors:Chapman, M.S, Minor, I, Rossmann, M.G, Diana, G.D, Andries, K.
Deposit date:1990-05-04
Release date:1991-10-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Human rhinovirus 14 complexed with antiviral compound R 61837.
J.Mol.Biol., 217, 1991
4V48
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BU of 4v48 by Molmil
Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome
Descriptor: 16S RIBOSOMAL RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Gao, H, Sengupta, J, Valle, M, Korostelev, A, Eswar, N, Stagg, S.M, Van Roey, P, Agrawal, R.K, Harvey, S.T, Sali, A, Chapman, M.S, Frank, J.
Deposit date:2003-05-06
Release date:2014-07-09
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (11.5 Å)
Cite:Study of the structural dynamics of the E. coli 70S ribosome using real space refinement
Cell(Cambridge,Mass.), 113, 2003
4V47
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Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome
Descriptor: 16S RIBOSOMAL RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Gao, H, Sengupta, J, Valle, M, Korostelev, A, Eswar, N, Stagg, S.M, Van Roey, P, Agrawal, R.K, Harvey, S.T, Sali, A, Chapman, M.S, Frank, J.
Deposit date:2003-05-06
Release date:2014-07-09
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (12.3 Å)
Cite:Study of the structural dynamics of the E. coli 70S ribosome using real space refinement
Cell(Cambridge,Mass.), 113, 2003
4GVZ
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BU of 4gvz by Molmil
Crystal structure of arginine kinase in complex with D-arginine, MgADP, and nitrate.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Arginine kinase, D-ARGININE, ...
Authors:Clark, S.A, Davulcu, O, Chapman, M.S.
Deposit date:2012-08-31
Release date:2012-10-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Crystal structures of arginine kinase in complex with ADP, nitrate, and various phosphagen analogs.
Biochem.Biophys.Res.Commun., 427, 2012
3M10
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BU of 3m10 by Molmil
Substrate-free form of Arginine Kinase
Descriptor: Arginine kinase, SULFATE ION
Authors:Yousef, M.S, Clark, S.A, Pruett, P.K, Somasundaram, T, Ellington, W.R, Chapman, M.S.
Deposit date:2010-03-03
Release date:2010-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.727 Å)
Cite:Arginine kinase: joint crystallographic and NMR RDC analyses link substrate-associated motions to intrinsic flexibility.
J.Mol.Biol., 405, 2011
5J9A
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BU of 5j9a by Molmil
Ambient temperature transition state structure of arginine kinase - crystal 11/Form II
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ARGININE, Arginine kinase, ...
Authors:Godsey, M, Davulcu, O, Nix, J, Skalicky, J.J, Bruschweiler, R, Chapman, M.S.
Deposit date:2016-04-08
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:The Sampling of Conformational Dynamics in Ambient-Temperature Crystal Structures of Arginine Kinase.
Structure, 24, 2016
5J99
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BU of 5j99 by Molmil
Ambient temperature transition state structure of arginine kinase - crystal 8/Form I
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ARGININE, Arginine kinase, ...
Authors:Godsey, M, Davulcu, O, Nix, J, Skalicky, J.J, Bruschweiler, R, Chapman, M.S.
Deposit date:2016-04-08
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Sampling of Conformational Dynamics in Ambient-Temperature Crystal Structures of Arginine Kinase.
Structure, 24, 2016
6NZ0
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BU of 6nz0 by Molmil
Cryo-EM structure of AAV-2 in complex with AAVR PKD domains 1 and 2
Descriptor: Capsid protein VP1, Dyslexia-associated protein KIAA0319-like protein, MAGNESIUM ION
Authors:Meyer, N.L, Xie, Q, Davulcu, O, Yoshioka, C, Chapman, M.S.
Deposit date:2019-02-12
Release date:2019-06-12
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structure of the gene therapy vector, adeno-associated virus with its cell receptor, AAVR.
Elife, 8, 2019
7KP3
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BU of 7kp3 by Molmil
Adeno-associated virus serotype 5 at 2.1 Angstroms resolution, AAV5
Descriptor: Capsid protein
Authors:Silveria, M, Chapman, M.S.
Deposit date:2020-11-10
Release date:2020-12-16
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:The Structure of an AAV5-AAVR Complex at 2.5 angstrom Resolution: Implications for Cellular Entry and Immune Neutralization of AAV Gene Therapy Vectors.
Viruses, 12, 2020
7KPN
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BU of 7kpn by Molmil
Adeno-associated virus serotype 5 in complex with the cellular receptor AAVR at 2.5 Angstroms resolution, AAV5 AAVR
Descriptor: Capsid protein, Dyslexia-associated protein KIAA0319-like protein
Authors:Silveria, M, Chapman, M.S.
Deposit date:2020-11-12
Release date:2020-12-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:The Structure of an AAV5-AAVR Complex at 2.5 angstrom Resolution: Implications for Cellular Entry and Immune Neutralization of AAV Gene Therapy Vectors.
Viruses, 12, 2020
3OT7
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BU of 3ot7 by Molmil
Escherichia coli apo-manganese superoxide dismutase
Descriptor: Superoxide dismutase [Mn]
Authors:Whittaker, M.M, Lerch, T.F, Kirillova, O, Chapman, M.S, Whittaker, J.W.
Deposit date:2010-09-10
Release date:2010-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Subunit dissociation and metal binding by Escherichia coli apo-manganese superoxide dismutase.
Arch.Biochem.Biophys., 505, 2011
1BG0
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BU of 1bg0 by Molmil
TRANSITION STATE STRUCTURE OF ARGININE KINASE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ARGININE KINASE, D-ARGININE, ...
Authors:Zhou, G, Somasundaram, T, Blanc, E, Parthasarathy, G, Ellington, W.R, Chapman, M.S.
Deposit date:1998-06-03
Release date:1998-10-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Transition state structure of arginine kinase: implications for catalysis of bimolecular reactions.
Proc.Natl.Acad.Sci.USA, 95, 1998
1LCU
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BU of 1lcu by Molmil
Polylysine Induces an Antiparallel Actin Dimer that Nucleates Filament Assembly: Crystal Structure at 3.5 A Resolution
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Bubb, M.R, Govindasamy, L, Yarmola, E.G, Vorobiev, S.M, Almo, S.C, Somasundaram, T, Chapman, M.S, Agbandje-Mckenna, M, Mckenna, R.
Deposit date:2002-04-06
Release date:2002-05-01
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Polylysine induces an antiparallel actin dimer that nucleates filament assembly: crystal structure at 3.5-A resolution.
J.Biol.Chem., 277, 2002
1SD0
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BU of 1sd0 by Molmil
Structure of arginine kinase C271A mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ARGININE, Arginine kinase, ...
Authors:Gattis, J.L, Ruben, E, Fenley, M.O, Ellington, W.R, Chapman, M.S.
Deposit date:2004-02-12
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The active site cysteine of arginine kinase: structural and functional analysis of partially active mutants
Biochemistry, 43, 2004
4GW0
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BU of 4gw0 by Molmil
Crystal structure of arginine kinase in complex with imino-L-ornithine, MgADP, and nitrate.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Arginine kinase, MAGNESIUM ION, ...
Authors:Clark, S.A, Davulcu, O, Chapman, M.S.
Deposit date:2012-08-31
Release date:2012-10-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.448 Å)
Cite:Crystal structures of arginine kinase in complex with ADP, nitrate, and various phosphagen analogs.
Biochem.Biophys.Res.Commun., 427, 2012
4GW2
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BU of 4gw2 by Molmil
Crystal structure of arginine kinase in complex with L-ornithine, MgADP, and nitrate.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Arginine kinase, L-ornithine, ...
Authors:Clark, S.A, Davulcu, O, Chapman, M.S.
Deposit date:2012-08-31
Release date:2012-10-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.157 Å)
Cite:Crystal structures of arginine kinase in complex with ADP, nitrate, and various phosphagen analogs.
Biochem.Biophys.Res.Commun., 427, 2012
4GVY
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BU of 4gvy by Molmil
Crystal structure of arginine kinase in complex with L-citrulline and MgADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Arginine kinase, CITRULLINE, ...
Authors:Clark, S.A, Davulcu, O, Chapman, M.S.
Deposit date:2012-08-31
Release date:2012-10-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.091 Å)
Cite:Crystal structures of arginine kinase in complex with ADP, nitrate, and various phosphagen analogs.
Biochem.Biophys.Res.Commun., 427, 2012
7THR
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BU of 7thr by Molmil
Cryo-electron microscopy of Adeno-associated virus serotype 4 at 2.2 A
Descriptor: Capsid, MAGNESIUM ION
Authors:Zane, G.M, Silveria, M.A, Meyer, N.L, White, T.A, Chapman, M.S.
Deposit date:2022-01-11
Release date:2023-01-25
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.21 Å)
Cite:Cryo-EM structure of adeno-associated virus 4 at 2.2 angstrom resolution.
Acta Crystallogr D Struct Biol, 79, 2023
1M15
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BU of 1m15 by Molmil
Transition state structure of arginine kinase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ARGININE, MAGNESIUM ION, ...
Authors:Yousef, M.S, Fabiola, F, Gattis, J.L, Somasundaram, T, Chapman, M.S.
Deposit date:2002-06-17
Release date:2002-12-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Refinement of the arginine kinase transition-state analogue complex at 1.2 A resolution: mechanistic insights.
Acta Crystallogr.,Sect.D, 58, 2002
7KFR
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BU of 7kfr by Molmil
Adeno-Associated Virus (AAV-DJ) - cryo-EM structure at 1.56 Angstrom Resolution
Descriptor: Capsid protein VP1, MAGNESIUM ION
Authors:Xie, Q, Yoshioka, C.K, Chapman, M.S.
Deposit date:2020-10-14
Release date:2020-12-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (1.56 Å)
Cite:Adeno-Associated Virus (AAV-DJ)-Cryo-EM Structure at 1.56 Angstroms Resolution.
Viruses, 12, 2020
1RL9
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BU of 1rl9 by Molmil
Crystal structure of Creatine-ADP arginine kinase ternary complex
Descriptor: (DIAMINOMETHYL-METHYL-AMINO)-ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, Arginine kinase, ...
Authors:Azzi, A, Clark, S.A, Ellington, R.W, Chapman, M.S.
Deposit date:2003-11-25
Release date:2004-05-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The role of phosphagen specificity loops in arginine kinase.
Protein Sci., 13, 2004
1LP3
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BU of 1lp3 by Molmil
The Atomic Structure of Adeno-Associated Virus (AAV-2), a Vector for Human Gene Therapy
Descriptor: AAV-2 capsid protein
Authors:Xie, Q, Bu, W, Bhatia, S, Hare, J, Somasundaram, T, Azzi, A, Chapman, M.S.
Deposit date:2002-05-07
Release date:2002-08-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:The atomic structure of adeno-associated virus (AAV-2), a vector for human gene therapy.
Proc.Natl.Acad.Sci.USA, 99, 2002
3RUB
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BU of 3rub by Molmil
CRYSTAL STRUCTURE OF THE UNACTIVATED FORM OF RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE FROM TOBACCO REFINED AT 2.0-ANGSTROMS RESOLUTION
Descriptor: ASPARAGINE, RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE, FORM III, ...
Authors:Schreuder, H, Cascio, D, Curmi, P.M.G, Chapman, M.S, Suh, S.W, Eisenberg, D.S.
Deposit date:1990-05-25
Release date:1992-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the unactivated form of ribulose-1,5-bisphosphate carboxylase/oxygenase from tobacco refined at 2.0-A resolution.
J.Biol.Chem., 267, 1992

 

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