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PDB: 148 results

1FZO
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MHC CLASS I NATURAL MUTANT H-2KBM8 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND SENDAI VIRUS NUCLEOPROTEIN
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rudolph, M.G, Speir, J.A, Brunmark, A, Mattsson, N, Jackson, M.R, Peterson, P.A, Teyton, L, Wilson, I.A.
Deposit date:2000-10-03
Release date:2001-03-28
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structures of K(bm1) and K(bm8) reveal that subtle changes in the peptide environment impact thermostability and alloreactivity.
Immunity, 14, 2001
1FZJ
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BU of 1fzj by Molmil
MHC CLASS I NATURAL MUTANT H-2KBM1 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rudolph, M.G, Speir, J.A, Brunmark, A, Mattsson, N, Jackson, M.R, Peterson, P.A, Teyton, L, Wilson, I.A.
Deposit date:2000-10-03
Release date:2001-03-28
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structures of K(bm1) and K(bm8) reveal that subtle changes in the peptide environment impact thermostability and alloreactivity.
Immunity, 14, 2001
1FZM
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BU of 1fzm by Molmil
MHC CLASS I NATURAL MUTANT H-2KBM8 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rudolph, M.G, Speir, J.A, Brunmark, A, Mattsson, N, Jackson, M.R, Peterson, P.A, Teyton, L, Wilson, I.A.
Deposit date:2000-10-03
Release date:2001-03-28
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structures of K(bm1) and K(bm8) reveal that subtle changes in the peptide environment impact thermostability and alloreactivity.
Immunity, 14, 2001
1FZK
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BU of 1fzk by Molmil
MHC CLASS I NATURAL MUTANT H-2KBM1 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND SENDAI VIRUS NUCLEOPROTEIN
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rudolph, M.G, Speir, J.A, Brunmark, A, Mattsson, N, Jackson, M.R, Peterson, P.A, Teyton, L, Wilson, I.A.
Deposit date:2000-10-03
Release date:2001-03-28
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structures of K(bm1) and K(bm8) reveal that subtle changes in the peptide environment impact thermostability and alloreactivity.
Immunity, 14, 2001
3CF3
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BU of 3cf3 by Molmil
Structure of P97/vcp in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Davies, J.M, Delabarre, B, Brunger, A.T, Weis, W.I.
Deposit date:2008-03-01
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (4.25 Å)
Cite:Improved structures of full-length p97, an AAA ATPase: implications for mechanisms of nucleotide-dependent conformational change.
Structure, 16, 2008
3CF1
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BU of 3cf1 by Molmil
Structure of P97/vcp in complex with ADP/ADP.alfx
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Transitional endoplasmic reticulum ATPase
Authors:Davies, J.M, Delabarre, B, Brunger, A.T, Weis, W.I.
Deposit date:2008-03-01
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (4.4 Å)
Cite:Improved structures of full-length p97, an AAA ATPase: implications for mechanisms of nucleotide-dependent conformational change.
Structure, 16, 2008
3QBA
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BU of 3qba by Molmil
Reintroducing Electrostatics into Macromolecular Crystallographic Refinement: Z-DNA (X-ray)
Descriptor: Z-DNA
Authors:Fenn, T.D, Schnieders, M.J, Mustyakimov, M, Wu, C, Langan, P, Pande, V.S, Brunger, A.T.
Deposit date:2011-01-12
Release date:2011-03-02
Last modified:2024-02-21
Method:NEUTRON DIFFRACTION (1.53 Å), X-RAY DIFFRACTION
Cite:Reintroducing electrostatics into macromolecular crystallographic refinement: application to neutron crystallography and DNA hydration.
Structure, 19, 2011
3CF2
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BU of 3cf2 by Molmil
Structure of P97/vcp in complex with ADP/AMP-PNP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Davies, J.M, Delabarre, B, Brunger, A.T, Weis, W.I.
Deposit date:2008-03-01
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Improved structures of full-length p97, an AAA ATPase: implications for mechanisms of nucleotide-dependent conformational change.
Structure, 16, 2008
3BBG
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BU of 3bbg by Molmil
MULTI-CONFORMER STRUCTURE OF RAGWEED POLLEN ALLERGEN FROM AMBROSIA TRIFIDA V, NMR, 2 STRUCTURES
Descriptor: POLLEN ALLERGEN 5
Authors:Warren, G.L, Tuner, C.J, Petsko, G.A, Brunger, A.T.
Deposit date:1998-04-24
Release date:1998-06-17
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:A Highly Precise Solution 1H NMR Structure of Ragweed Allergen Amb. T. V
To be Published
2NM1
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BU of 2nm1 by Molmil
Structure of BoNT/B in complex with its protein receptor
Descriptor: Botulinum neurotoxin type B, Synaptotagmin-2
Authors:Jin, R, Rummel, A, Binz, T, Brunger, A.T.
Deposit date:2006-10-20
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Botulinum neurotoxin B recognizes its protein receptor with high affinity and specificity.
Nature, 444, 2006
3BBP
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BU of 3bbp by Molmil
Rab6-GTP:GCC185 Rab binding domain complex
Descriptor: GRIP and coiled-coil domain-containing protein 2, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Schweizer Burguete, A, Fenn, T.D, Brunger, A.T, Pfeffer, S.R.
Deposit date:2007-11-09
Release date:2008-02-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Rab and Arl GTPase family members cooperate in the localization of the golgin GCC185.
Cell(Cambridge,Mass.), 132, 2008
2QJ0
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BU of 2qj0 by Molmil
Structure of the yeast U-box-containing ubiquitin ligase Ufd2p
Descriptor: Ubiquitin conjugation factor E4
Authors:Tu, D, Brunger, A.T.
Deposit date:2007-07-06
Release date:2007-09-18
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Inaugural Article: Structure and function of the yeast U-box-containing ubiquitin ligase Ufd2p.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2QN0
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BU of 2qn0 by Molmil
Structure of Botulinum neurotoxin serotype C1 light chain protease
Descriptor: Neurotoxin, ZINC ION
Authors:Jin, R, Sikorra, S, Stegmann, C.M, Pich, A, Binz, T, Brunger, A.T.
Deposit date:2007-07-17
Release date:2007-09-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and biochemical studies of botulinum neurotoxin serotype C1 light chain protease: implications for dual substrate specificity.
Biochemistry, 46, 2007
3B5N
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BU of 3b5n by Molmil
Structure of the yeast plasma membrane SNARE complex
Descriptor: Protein SSO1, Protein transport protein SEC9, Synaptobrevin homolog 1
Authors:Strop, P, Brunger, A.T.
Deposit date:2007-10-26
Release date:2007-11-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structure of the Yeast Plasma Membrane SNARE Complex Reveals Destabilizing Water-filled Cavities.
J.Biol.Chem., 283, 2008
2Q3Z
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BU of 2q3z by Molmil
Transglutaminase 2 undergoes large conformational change upon activation
Descriptor: Polypeptide, SULFATE ION, Transglutaminase 2
Authors:Strop, P, Pinkas, D.M, Brunger, A.T, Khosla, C.
Deposit date:2007-05-30
Release date:2007-10-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Transglutaminase 2 undergoes a large conformational change upon activation
Plos Biol., 5, 2007
3CF0
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BU of 3cf0 by Molmil
Structure of D2 subdomain of P97/VCP in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Davies, J.M, Brunger, A.T, Weis, W.I.
Deposit date:2008-03-01
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Improved Structures of Full-Length p97, an AAA ATPase: Implications for Mechanisms of Nucleotide-Dependent Conformational Change.
Structure, 16, 2008
2QIZ
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BU of 2qiz by Molmil
Structure of the yeast U-box-containing ubiquitin ligase Ufd2p
Descriptor: POTASSIUM ION, Ubiquitin conjugation factor E4
Authors:Tu, D, Brunger, A.T.
Deposit date:2007-07-06
Release date:2007-09-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Inaugural Article: Structure and function of the yeast U-box-containing ubiquitin ligase Ufd2p.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2CAN
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BU of 2can by Molmil
HUMAN ORNITHINE AMINOTRANSFERASE COMPLEXED WITH L-CANALINE
Descriptor: CANALINE, ORNITHINE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Shah, S.A, Shen, B.W, Brunger, A.T.
Deposit date:1997-05-29
Release date:1998-06-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human ornithine aminotransferase complexed with L-canaline and gabaculine: structural basis for substrate recognition.
Structure, 5, 1997
2RH6
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BU of 2rh6 by Molmil
Structure of Xac NPP for evaluation of refinement methodology
Descriptor: ADENOSINE MONOPHOSPHATE, Phosphodiesterase-nucleotide pyrophosphatase, ZINC ION
Authors:Zalatan, J.G, Fenn, T.D, Brunger, A.T, Hershlag, D.
Deposit date:2007-10-06
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystallographic Goodness of Fit: A New Treatment of Model Complexity
To be Published
2FO5
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BU of 2fo5 by Molmil
Crystal structure of recombinant barley cysteine endoprotease B isoform 2 (EP-B2) in complex with leupeptin
Descriptor: ACE-LEU-LEU-argininal (leupeptin), Cysteine proteinase EP-B 2, SULFATE ION
Authors:Bethune, M.T, Strop, P, Brunger, A.T, Khosla, C.
Deposit date:2006-01-12
Release date:2006-07-18
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Heterologous Expression, Purification, Refolding, and Structural-Functional Characterization of EP-B2, a Self-Activating Barley Cysteine Endoprotease.
Chem.Biol., 13, 2006
2GSO
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BU of 2gso by Molmil
Structure of Xac Nucleotide Pyrophosphatase/Phosphodiesterase in Complex with Vanadate
Descriptor: VANADATE ION, ZINC ION, phosphodiesterase-nucleotide pyrophosphatase
Authors:Zalatan, J.G, Fenn, T.D, Brunger, A.T, Herschlag, D.
Deposit date:2006-04-26
Release date:2006-08-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural and functional comparisons of nucleotide pyrophosphatase/phosphodiesterase and alkaline phosphatase: implications for mechanism and evolution
Biochemistry, 45, 2006
2GSU
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BU of 2gsu by Molmil
Structure of Xac Nucleotide Pyrophosphatase/Phosphodiesterase in Complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, ZINC ION, phosphodiesterase-nucleotide pyrophosphatase
Authors:Zalatan, J.G, Fenn, T.D, Brunger, A.T, Herschlag, D.
Deposit date:2006-04-26
Release date:2006-08-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional comparisons of nucleotide pyrophosphatase/phosphodiesterase and alkaline phosphatase: implications for mechanism and evolution
Biochemistry, 45, 2006
2GSN
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BU of 2gsn by Molmil
Structure of Xac Nucleotide Pyrophosphatase/Phosphodiesterase
Descriptor: ZINC ION, phosphodiesterase-nucleotide pyrophosphatase
Authors:Zalatan, J.G, Fenn, T.D, Brunger, A.T, Herschlag, D.
Deposit date:2006-04-26
Release date:2006-08-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and functional comparisons of nucleotide pyrophosphatase/phosphodiesterase and alkaline phosphatase: implications for mechanism and evolution
Biochemistry, 45, 2006

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