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PDB: 214 件

5OA3
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Human 40S-eIF2D-re-initiation complex
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Weisser, M, Schaefer, T, Leibundgut, M, Boehringer, D, Aylett, C.H.S, Ban, N.
登録日2017-06-20
公開日2017-08-09
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural and Functional Insights into Human Re-initiation Complexes.
Mol. Cell, 67, 2017
2AKH
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BU of 2akh by Molmil
Normal mode-based flexible fitted coordinates of a non-translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
分子名称: Preprotein translocase secE subunit, Preprotein translocase secY subunit, Protein-export membrane protein secG
著者Mitra, K.M, Schaffitzel, C, Shaikh, T, Tama, F, Jenni, S, Brooks III, C.L, Ban, N, Frank, J.
登録日2005-08-03
公開日2005-11-15
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (14.9 Å)
主引用文献Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Nature, 438, 2005
1W26
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Trigger Factor in Complex with the Ribosome forms a Molecular Cradle for Nascent Proteins
分子名称: TRIGGER FACTOR
著者Ferbitz, L, Maier, T, Patzelt, H, Bukau, B, Deuerling, E, Ban, N.
登録日2004-06-28
公開日2004-09-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Trigger Factor in Complex with the Ribosome Forms a Molecular Cradle for Nascent Proteins
Nature, 431, 2004
2CDH
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ARCHITECTURE OF THE THERMOMYCES LANUGINOSUS FUNGAL FATTY ACID SYNTHASE AT 5 ANGSTROM RESOLUTION.
分子名称: DEHYDRATASE, ENOYL REDUCTASE, KETOACYL REDUCTASE, ...
著者Jenni, S, Leibundgut, M, Maier, T, Ban, N.
登録日2006-01-24
公開日2006-03-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Architecture of a Fungal Fatty Acid Synthase at 5 A Resolution.
Science, 311, 2006
7O80
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Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N.
登録日2021-04-14
公開日2021-06-02
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
Science, 372, 2021
7O7Y
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Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution)
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N.
登録日2021-04-14
公開日2021-06-02
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
Science, 372, 2021
7O7Z
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Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N.
登録日2021-04-14
公開日2021-06-02
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
Science, 372, 2021
7O81
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Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N.
登録日2021-04-14
公開日2021-06-02
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
Science, 372, 2021
7O5H
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Ribosomal methyltransferase KsgA bound to small ribosomal subunit
分子名称: 16S rRNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Stephan, N.C, Ries, A.B, Boehringer, D, Ban, N.
登録日2021-04-08
公開日2021-06-16
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis of successive adenosine modifications by the conserved ribosomal methyltransferase KsgA.
Nucleic Acids Res., 49, 2021
1ULC
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BU of 1ulc by Molmil
CGL2 in complex with lactose
分子名称: beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, galectin-2
著者Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
登録日2003-09-12
公開日2004-04-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
2CJ9
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Crystal structure of Methanosarcina barkeri seryl-tRNA synthetase complexed with an analog of seryladenylate
分子名称: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, CHLORIDE ION, SERYL-TRNA SYNTHETASE, ...
著者Bilokapic, S, Maier, T, Ahel, D, Gruic-Sovulj, I, Soll, D, Weygand-Durasevic, I, Ban, N.
登録日2006-03-29
公開日2006-06-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the Unusual Seryl-tRNA Synthetase Reveals a Distinct Zinc-Dependent Mode of Substrate Recognition
Embo J., 25, 2006
1UL9
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CGL2 ligandfree
分子名称: galectin-2
著者Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
登録日2003-09-12
公開日2004-04-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
2CIM
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Crystal structure of Methanosarcina barkeri seryl-tRNA synthetase
分子名称: CHLORIDE ION, PLATINUM (II) ION, SERYL-TRNA SYNTHETASE, ...
著者Bilokapic, S, Maier, T, Ahel, D, Gruic-Sovulj, I, Soll, D, Weygand-Durasevic, I, Ban, N.
登録日2006-03-24
公開日2006-06-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structure of the Unusual Seryl-tRNA Synthetase Reveals a Distinct Zinc-Dependent Mode of Substrate Recognition
Embo J., 25, 2006
2CJA
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BU of 2cja by Molmil
Crystal structure of Methanosarcina barkeri seryl-tRNA synthetase complexed with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Bilokapic, S, Maier, T, Ahel, D, Gruic-Sovulj, I, Soll, D, Weygand-Durasevic, I, Ban, N.
登録日2006-03-30
公開日2006-06-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the Unusual Seryl-tRNA Synthetase Reveals a Distinct Zinc-Dependent Mode of Substrate Recognition
Embo J., 25, 2006
2CJB
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BU of 2cjb by Molmil
Crystal structure of Methanosarcina barkeri seryl-tRNA synthetase complexed with serine
分子名称: CHLORIDE ION, SERINE, SERYL-TRNA SYNTHETASE, ...
著者Bilokapic, S, Maier, T, Ahel, D, Gruic-Sovulj, I, Soll, D, Weygand-Durasevic, I, Ban, N.
登録日2006-03-30
公開日2006-06-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the Unusual Seryl-tRNA Synthetase Reveals a Distinct Zinc-Dependent Mode of Substrate Recognition
Embo J., 25, 2006
1P6V
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BU of 1p6v by Molmil
Crystal structure of the tRNA domain of transfer-messenger RNA in complex with SmpB
分子名称: 45-MER, SsrA-binding protein
著者Gutmann, S, Haebel, P.W, Metzinger, L, Sutter, M, Felden, B, Ban, N.
登録日2003-04-30
公開日2003-08-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB
Nature, 424, 2003
1ULF
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BU of 1ulf by Molmil
CGL2 in complex with Blood Group A tetrasaccharide
分子名称: alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, galectin-2
著者Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
登録日2003-09-12
公開日2004-04-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
1ULE
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CGL2 in complex with linear B2 trisaccharide
分子名称: alpha-D-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, galectin-2
著者Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
登録日2003-09-12
公開日2004-04-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
1ULD
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BU of 1uld by Molmil
CGL2 in complex with blood group H type II
分子名称: alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, galectin-2
著者Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
登録日2003-09-12
公開日2004-04-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
1ULG
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CGL2 in complex with Thomsen-Friedenreich antigen
分子名称: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, galectin-2
著者Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
登録日2003-09-12
公開日2004-04-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
2XKV
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BU of 2xkv by Molmil
Atomic Model of the SRP-FtsY Early Conformation
分子名称: 4.5S RNA, CELL DIVISION PROTEIN FTSY, SIGNAL RECOGNITION PARTICLE PROTEIN
著者Estrozi, L.F, Boehringer, D, Shan, S.-o, Ban, N, Schaffitzel, C.
登録日2010-07-13
公開日2010-12-15
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (13.5 Å)
主引用文献Cryo-Em Structure of the E. Coli Translating Ribosome in Complex with Srp and its Receptor.
Nat.Struct.Mol.Biol., 18, 2011
2XXA
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The Crystal Structure of the Signal Recognition Particle (SRP) in Complex with its Receptor(SR)
分子名称: 4.5S RNA, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Ataide, S.F, Schmitz, N, Shen, K, Ke, A, Shan, S, Doudna, J.A, Ban, N.
登録日2010-11-09
公開日2011-03-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.94 Å)
主引用文献The Crystal Structure of the Signal Recognition Particle in Complex with its Receptor.
Science, 331, 2011
4A29
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Structure of the engineered retro-aldolase RA95.0
分子名称: 1-(6-METHOXYNAPHTHALEN-2-YL)BUTANE-1,3-DIONE, D-MALATE, ENGINEERED RETRO-ALDOL ENZYME RA95.0
著者Giger, L, Caner, S, Kast, P, Baker, D, Ban, N, Hilvert, D.
登録日2011-09-23
公開日2012-11-07
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Evolution of a designed retro-aldolase leads to complete active site remodeling.
Nat.Chem.Biol., 9, 2013
4A2R
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Structure of the engineered retro-aldolase RA95.5-5
分子名称: 1-(6-METHOXYNAPHTHALEN-2-YL)BUTANE-1,3-DIONE, INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE
著者Giger, L, Caner, S, Kast, P, Baker, D, Ban, N, Hilvert, D.
登録日2011-09-28
公開日2012-11-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.302 Å)
主引用文献Evolution of a designed retro-aldolase leads to complete active site remodeling.
Nat.Chem.Biol., 9, 2013
4A2S
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Structure of the engineered retro-aldolase RA95.5
分子名称: 1-(6-METHOXYNAPHTHALEN-2-YL)BUTANE-1,3-DIONE, INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE
著者Giger, L, Caner, S, Kast, P, Baker, D, Ban, N, Hilvert, D.
登録日2011-09-28
公開日2012-11-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Evolution of a designed retro-aldolase leads to complete active site remodeling.
Nat.Chem.Biol., 9, 2013

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