1WQM
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![BU of 1wqm by Molmil](/molmil-images/mine/1wqm) | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME | Descriptor: | CHLORIDE ION, LYSOZYME, SODIUM ION | Authors: | Yamagata, Y, Kubota, M, Sumikawa, Y, Funahashi, J, Fujii, S, Yutani, K. | Deposit date: | 1998-02-09 | Release date: | 1998-07-01 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants. Biochemistry, 37, 1998
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1WQR
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![BU of 1wqr by Molmil](/molmil-images/mine/1wqr) | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME | Descriptor: | CHLORIDE ION, LYSOZYME, SODIUM ION | Authors: | Yamagata, Y, Kubota, M, Sumikawa, Y, Funahashi, J, Fujii, S, Yutani, K. | Deposit date: | 1998-02-09 | Release date: | 1998-07-01 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants. Biochemistry, 37, 1998
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1WQN
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![BU of 1wqn by Molmil](/molmil-images/mine/1wqn) | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME | Descriptor: | CHLORIDE ION, LYSOZYME, SODIUM ION | Authors: | Yamagata, Y, Kubota, M, Sumikawa, Y, Funahashi, J, Fujii, S, Yutani, K. | Deposit date: | 1998-02-09 | Release date: | 1998-07-01 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants. Biochemistry, 37, 1998
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1WQQ
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![BU of 1wqq by Molmil](/molmil-images/mine/1wqq) | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME | Descriptor: | CHLORIDE ION, LYSOZYME, SODIUM ION | Authors: | Yamagata, Y, Kubota, M, Sumikawa, Y, Funahashi, J, Fujii, S, Yutani, K. | Deposit date: | 1998-02-09 | Release date: | 1998-07-01 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants. Biochemistry, 37, 1998
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2E45
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![BU of 2e45 by Molmil](/molmil-images/mine/2e45) | |
1WNI
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![BU of 1wni by Molmil](/molmil-images/mine/1wni) | Crystal Structure of H2-Proteinase | Descriptor: | Trimerelysin II, ZINC ION | Authors: | Kumasaka, T, Yamamoto, M, Moriyama, H, Tanaka, N, Sato, M, Katsube, Y, Yamakawa, Y, Omori-Satoh, T, Iwanaga, S, Ueki, T. | Deposit date: | 2004-08-04 | Release date: | 2004-08-17 | Last modified: | 2019-10-09 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of H2-proteinase from the venom of Trimeresurus flavoviridis. J.Biochem., 119, 1996
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1UC3
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2EK7
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![BU of 2ek7 by Molmil](/molmil-images/mine/2ek7) | Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L163M) | Descriptor: | Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION | Authors: | Asada, Y, Taketa, M, Morikawa, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-03-22 | Release date: | 2007-09-25 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L163M) To be Published
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1WW9
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![BU of 1ww9 by Molmil](/molmil-images/mine/1ww9) | Crystal structure of the terminal oxygenase component of carbazole 1,9a-dioxygenase, a non-heme iron oxygenase system catalyzing the novel angular dioxygenation for carbazole and dioxin | Descriptor: | FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, terminal oxygenase component of carbazole | Authors: | Nojiri, H, Ashikawa, Y, Noguchi, H, Nam, J.-W, Urata, M, Fujimoto, Z, Mizuno, H, Yoshida, T, Habe, H, Omori, T. | Deposit date: | 2005-01-05 | Release date: | 2005-08-23 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Structure of the terminal oxygenase component of angular dioxygenase, carbazole 1,9a-dioxygenase J.Mol.Biol., 351, 2005
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2D2A
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![BU of 2d2a by Molmil](/molmil-images/mine/2d2a) | Crystal Structure of Escherichia coli SufA Involved in Biosynthesis of Iron-sulfur Clusters | Descriptor: | SufA protein | Authors: | Wada, K, Hasegawa, Y, Gong, Z, Minami, Y, Fukuyama, K, Takahashi, Y. | Deposit date: | 2005-09-05 | Release date: | 2005-12-13 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Crystal structure of Escherichia coli SufA involved in biosynthesis of iron-sulfur clusters: Implications for a functional dimer Febs Lett., 579, 2005
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2D3W
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![BU of 2d3w by Molmil](/molmil-images/mine/2d3w) | Crystal Structure of Escherichia coli SufC, an ATPase compenent of the SUF iron-sulfur cluster assembly machinery | Descriptor: | Probable ATP-dependent transporter sufC | Authors: | Kitaoka, S, Wada, K, Hasegawa, Y, Minami, Y, Takahashi, Y, Fukuyama, K. | Deposit date: | 2005-10-03 | Release date: | 2006-01-17 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal structure of Escherichia coli SufC, an ABC-type ATPase component of the SUF iron-sulfur cluster assembly machinery Febs Lett., 580, 2006
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2DKV
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![BU of 2dkv by Molmil](/molmil-images/mine/2dkv) | Crystal structure of class I chitinase from Oryza sativa L. japonica | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, chitinase | Authors: | Kezuka, Y, Nishizawa, Y, Watanabe, T, Nonaka, T. | Deposit date: | 2006-04-14 | Release date: | 2007-05-01 | Last modified: | 2020-01-01 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structure of full-length class I chitinase from rice revealed by X-ray crystallography and small-angle X-ray scattering. Proteins, 78, 2010
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2E33
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![BU of 2e33 by Molmil](/molmil-images/mine/2e33) | Structural basis for selection of glycosylated substrate by SCFFbs1 ubiquitin ligase | Descriptor: | F-box only protein 2, Ribonuclease pancreatic, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | Authors: | Mizushima, T, Yoshida, Y, Kumanomidou, T, Hasegawa, Y, Yamane, T, Tanaka, K. | Deposit date: | 2006-11-20 | Release date: | 2007-03-20 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural basis for the selection of glycosylated substrates by SCFFbs1 ubiquitin ligase Proc.Natl.Acad.Sci.Usa, 104, 2007
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2E31
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![BU of 2e31 by Molmil](/molmil-images/mine/2e31) | Structural basis for selection of glycosylated substrate by SCFFbs1 ubiquitin ligase | Descriptor: | F-box only protein 2, S-phase kinase-associated protein 1A | Authors: | Mizushima, T, Yoshida, Y, Kumanomidou, T, Hasegawa, Y, Yamane, T, Tanaka, K. | Deposit date: | 2006-11-20 | Release date: | 2007-03-20 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structural basis for the selection of glycosylated substrates by SCFFbs1 ubiquitin ligase Proc.Natl.Acad.Sci.Usa, 104, 2007
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2E32
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![BU of 2e32 by Molmil](/molmil-images/mine/2e32) | Structural basis for selection of glycosylated substrate by SCFFbs1 ubiquitin ligase | Descriptor: | F-box only protein 2, S-phase kinase-associated protein 1A | Authors: | Mizushima, T, Yoshida, Y, Kumanomidou, T, Hasegawa, Y, Yamane, T, Tanaka, K. | Deposit date: | 2006-11-20 | Release date: | 2007-03-20 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (3.52 Å) | Cite: | Structural basis for the selection of glycosylated substrates by SCFFbs1 ubiquitin ligase Proc.Natl.Acad.Sci.Usa, 104, 2007
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1WYG
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![BU of 1wyg by Molmil](/molmil-images/mine/1wyg) | Crystal Structure of a Rat Xanthine Dehydrogenase Triple Mutant (C535A, C992R and C1324S) | Descriptor: | 2-HYDROXYBENZOIC ACID, ACETIC ACID, CALCIUM ION, ... | Authors: | Nishino, T, Okamoto, K, Kawaguchi, Y, Hori, H, Matsumura, T, Eger, B.T, Pai, E.F, Nishino, T. | Deposit date: | 2005-02-14 | Release date: | 2005-05-31 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Mechanism of the Conversion of Xanthine Dehydrogenase to Xanthine Oxidase: IDENTIFICATION OF THE TWO CYSTEINE DISULFIDE BONDS AND CRYSTAL STRUCTURE OF A NON-CONVERTIBLE RAT LIVER XANTHINE DEHYDROGENASE MUTANT J.Biol.Chem., 280, 2005
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2D32
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![BU of 2d32 by Molmil](/molmil-images/mine/2d32) | Crystal Structure of Michaelis Complex of gamma-Glutamylcysteine Synthetase | Descriptor: | CYSTEINE, GLUTAMIC ACID, Glutamate--cysteine ligase, ... | Authors: | Hibi, T, Nakayama, M, Nii, H, Kurokawa, Y, Katano, H, Oda, J. | Deposit date: | 2005-09-25 | Release date: | 2006-11-14 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structural basis of efficient coupling peptide ligation and ATP hydrolysis by gamma-gluatamylcysteine synthetase To be Published
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2E0I
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![BU of 2e0i by Molmil](/molmil-images/mine/2e0i) | Crystal structure of archaeal photolyase from Sulfolobus tokodaii with two FAD molecules: Implication of a novel light-harvesting cofactor | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 432aa long hypothetical deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE | Authors: | Fujihashi, M, Numoto, N, Kobayashi, Y, Mizushima, A, Tsujimura, M, Nakamura, A, Kawarabayashi, Y, Miki, K. | Deposit date: | 2006-10-10 | Release date: | 2006-11-28 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal Structure of Archaeal Photolyase from Sulfolobus tokodaii with Two FAD Molecules: Implication of a Novel Light-harvesting Cofactor J.Mol.Biol., 365, 2007
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2E21
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![BU of 2e21 by Molmil](/molmil-images/mine/2e21) | Crystal structure of TilS in a complex with AMPPNP from Aquifex aeolicus. | Descriptor: | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, tRNA(Ile)-lysidine synthase | Authors: | Kuratani, M, Yoshikawa, Y, Sekine, S, Ishii, T, Shibata, R, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2006-11-06 | Release date: | 2007-11-06 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural basis of the initial binding of tRNA(Ile) lysidine synthetase TilS with ATP and L-lysine To be Published
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1UC2
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![BU of 1uc2 by Molmil](/molmil-images/mine/1uc2) | Hypothetical Extein Protein of PH1602 from Pyrococcus horikoshii | Descriptor: | SULFATE ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, hypothetical protein PH1602 | Authors: | Okada, C, Maegawa, Y, Yao, M, Tanaka, I. | Deposit date: | 2003-04-08 | Release date: | 2004-05-04 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Crystal structure of an RtcB homolog protein (PH1602-extein protein) from Pyrococcus horikoshii reveals a novel fold Proteins, 63, 2006
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2E89
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![BU of 2e89 by Molmil](/molmil-images/mine/2e89) | Crystal structure of Aquifex aeolicus TilS in a complex with ATP, Magnesium ion, and L-lysine | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, LYSINE, MAGNESIUM ION, ... | Authors: | Kuratani, M, Yoshikawa, Y, Takahashi, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-01-19 | Release date: | 2007-11-13 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structural basis of the initial binding of tRNA(Ile) lysidine synthetase TilS with ATP and L-lysine To be Published
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1WLT
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![BU of 1wlt by Molmil](/molmil-images/mine/1wlt) | Crystal Structure of dTDP-4-dehydrorhamnose 3,5-epimerase homologue from Sulfolobus tokodaii | Descriptor: | 176aa long hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase | Authors: | Watanabe, N, Sakai, N, Zilian, Z, Kawarabayasi, Y, Tanaka, I. | Deposit date: | 2004-06-29 | Release date: | 2005-07-26 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal Structure of dTDP-4-dehydrorhamnose 3,5-epimerase homologue to be published
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2F2B
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![BU of 2f2b by Molmil](/molmil-images/mine/2f2b) | Crystal structure of integral membrane protein Aquaporin AqpM at 1.68A resolution | Descriptor: | Aquaporin aqpM, GLYCEROL | Authors: | Lee, J.K, Kozono, D, Remis, J, Kitagawa, Y, Agre, P, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP) | Deposit date: | 2005-11-15 | Release date: | 2005-12-06 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (1.68 Å) | Cite: | Structural basis for conductance by the archaeal aquaporin AqpM at 1.68 A. Proc.Natl.Acad.Sci.Usa, 102, 2005
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2EVU
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![BU of 2evu by Molmil](/molmil-images/mine/2evu) | Crystal structure of aquaporin AqpM at 2.3A resolution | Descriptor: | Aquaporin aqpM, GLYCEROL, octyl beta-D-glucopyranoside | Authors: | Lee, J.K, Kozono, D, Remis, J, Kitagawa, Y, Agre, P, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP) | Deposit date: | 2005-10-31 | Release date: | 2005-12-06 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structural basis for conductance by the archaeal aquaporin AqpM at 1.68 A. Proc.Natl.Acad.Sci.Usa, 102, 2005
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2CZ7
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![BU of 2cz7 by Molmil](/molmil-images/mine/2cz7) | Fe-type NHase photo-activated for 75min at 105K | Descriptor: | FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ... | Authors: | Nojiri, M, Kawano, Y, Hashimoto, K, Kamiya, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-07-11 | Release date: | 2006-01-11 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Active Center Structures of Photo-reactive Nitrile Hydratase during its Photo-activation Process To be Published
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