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PDB: 532 件
5WUT
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Crystal structure of laminarinase from Flavobacterium sp. UMI-01
分子名称: ULam111
著者Qin, H.M, Miyakawa, Y, Nakamura, A, Tanokura, M.
登録日2016-12-21
公開日2018-01-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of laminarinase from Flavobacterium sp. UMI-01
To Be Published
2KE4
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BU of 2ke4 by Molmil
The NMR structure of the TC10 and Cdc42 interacting domain of CIP4
分子名称: Cdc42-interacting protein 4
著者Kumeta, H, Kanoh, D, Kobashigawa, Y, Inagaki, F.
登録日2009-01-22
公開日2009-03-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The NMR structure of the TC10- and Cdc42-interacting domain of CIP4.
J.Biomol.Nmr, 44, 2009
2KBT
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Attachment of an NMR-invisible solubility enhancement tag (INSET) using a sortase-mediated protein ligation method
分子名称: Proto-oncogene vav,Immunoglobulin G-binding protein G
著者Kumeta, H, Kobashigawa, Y, Ogura, K, Inagaki, F.
登録日2008-12-07
公開日2009-02-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Attachment of an NMR-invisible solubility enhancement tag using a sortase-mediated protein ligation method
J.Biomol.Nmr, 43, 2009
6A7X
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BU of 6a7x by Molmil
Rat Xanthine oxidoreductase, D428A variant, NAD bound form
分子名称: BICARBONATE ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Okamoto, K, Kawaguchi, Y.
登録日2018-07-05
公開日2019-07-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Rat Xanthine oxidoreductase, D428A variant, NAD bound form
To Be Published
6ADJ
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BU of 6adj by Molmil
Rat Xanthine oxidoreductase, D428E variant
分子名称: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Okamoto, K, Kawaguchi, Y.
登録日2018-08-01
公開日2019-08-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Rat Xanthine oxidoreductase, D428A variant, NAD bound form
To Be Published
6AC1
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Rat Xanthine oxidoreductase, NADH bound form
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, BICARBONATE ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Okamoto, K, Kawaguchi, Y.
登録日2018-07-24
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Rat Xanthine oxidoreductase, D428A variant, NAD bound form
To Be Published
6AC4
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Rat Xanthine oxidoreductase, D428N variant
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Xanthine dehydrogenase/oxidase
著者Okamoto, K, Kawaguchi, Y.
登録日2018-07-25
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Rat Xanthine oxidoreductase, D428A variant, NAD bound form
To Be Published
1IY3
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BU of 1iy3 by Molmil
Solution Structure of the Human lysozyme at 4 degree C
分子名称: Lysozyme
著者Kumeta, H, Miura, A, Kobashigawa, Y, Miura, K, Oka, C, Nitta, K, Nemoto, N, Tsuda, S.
登録日2002-07-15
公開日2002-07-31
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Low-temperature-induced structural changes in human lysozyme elucidated by three-dimensional NMR spectroscopy
Biochemistry, 42, 2003
1IY4
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Solution structure of the human lysozyme at 35 degree C
分子名称: Lysozyme
著者Kumeta, H, Miura, A, Kobashigawa, Y, Miura, K, Oka, C, Nitta, K, Nemoto, N, Tsuda, S.
登録日2002-07-15
公開日2002-07-31
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Low-temperature-induced structural changes in human lysozyme elucidated by three-dimensional NMR spectroscopy
Biochemistry, 42, 2003
1J32
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Aspartate Aminotransferase from Phormidium lapideum
分子名称: PYRIDOXAL-5'-PHOSPHATE, aspartate aminotransferase
著者Kim, H, Sawa, Y, Hamada, K.
登録日2003-01-17
公開日2003-02-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural studies of aspartate aminotransferase from Phormidium lapideum
To be Published
3WBH
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Structural characteristics of alkaline phosphatase from a moderately halophilic bacteria Halomonas sp.593
分子名称: Alkaline phosphatase, CHLORIDE ION, MAGNESIUM ION, ...
著者Arai, S, Yonezawa, Y, Ishibashi, M, Matsumoto, F, Tamada, T, Tokunaga, H, Tokunaga, M, Kuroki, R.
登録日2013-05-17
公開日2014-03-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural characteristics of alkaline phosphatase from the moderately halophilic bacterium Halomonas sp. 593.
Acta Crystallogr.,Sect.D, 70, 2014
3WS4
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N288Q-N321Q mutant BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (Condition-2A)
分子名称: Beta-lactamase, CHLORIDE ION, STRONTIUM ION
著者Arai, S, Yonezawa, Y, Okazaki, N, Matsumoto, F, Shimizu, R, Yamada, M, Adachi, M, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R.
登録日2014-02-28
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WRT
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Wild type beta-lactamase DERIVED FROM CHROMOHALOBACTER SP.560
分子名称: Beta-lactamase
著者Arai, S, Yonezawa, Y, Okazaki, N, Matsumoto, F, Shimizu, R, Yamada, M, Adachi, M, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R.
登録日2014-02-27
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WS2
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N288Q-N321Q mutant BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (Condition-1C)
分子名称: Beta-lactamase, CALCIUM ION, CESIUM ION
著者Arai, S, Yonezawa, Y, Okazaki, N, Matsumoto, F, Shimizu, R, Yamada, M, Adachi, M, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R.
登録日2014-02-27
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WS1
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N288Q-N321Q mutant BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (Condition-1B)
分子名称: Beta-lactamase, CALCIUM ION, CESIUM ION
著者Arai, S, Yonezawa, Y, Okazaki, N, Matsumoto, F, Shimizu, R, Yamada, M, Adachi, M, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R.
登録日2014-02-27
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WD7
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Type III polyketide synthase
分子名称: COENZYME A, NICKEL (II) ION, SULFATE ION, ...
著者Mori, T, Shimokawa, Y, Matsui, T, Kato, R, Sugio, S, Morita, H, Abe, I.
登録日2013-06-10
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Cloning, characterization, and crystal structure analysis of novel type III polyketide synthases from Citrus microcarpa
To be Published
3WS5
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BU of 3ws5 by Molmil
N288Q-N321Q mutant BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (Condition-2B)
分子名称: Beta-lactamase, CALCIUM ION, CHLORIDE ION, ...
著者Arai, S, Yonezawa, Y, Okazaki, N, Matsumoto, F, Shimizu, R, Yamada, M, Adachi, M, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R.
登録日2014-02-28
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WD8
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TypeIII polyketide synthases
分子名称: GLYCEROL, Type III polyketide synthase quinolone synthase
著者Mori, T, Shimokawa, Y, Matsui, T, Morita, H, Abe, I.
登録日2013-06-10
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.463 Å)
主引用文献Cloning, characterization, and crystal structure analysis of novel type III polyketide synthases from Citrus microcarpa
To be Published
3WS0
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N288Q-N321Q mutant BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (Condition-1A)
分子名称: Beta-lactamase, CALCIUM ION, CESIUM ION, ...
著者Arai, S, Yonezawa, Y, Okazaki, N, Matsumoto, F, Shimizu, R, Yamada, M, Adachi, M, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R.
登録日2014-02-27
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WRZ
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N288Q-N321Q mutant BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (without soaking)
分子名称: Beta-lactamase, CALCIUM ION, CHLORIDE ION
著者Arai, S, Yonezawa, Y, Okazaki, N, Matsumoto, F, Shimizu, R, Yamada, M, Adachi, M, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R.
登録日2014-02-27
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
1JFL
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CRYSTAL STRUCTURE DETERMINATION OF ASPARTATE RACEMASE FROM AN ARCHAEA
分子名称: ASPARTATE RACEMASE
著者Liu, L.J, Iwata, K, Kita, A, Kawarabayasi, Y, Yohda, M, Miki, K.
登録日2001-06-21
公開日2002-06-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of aspartate racemase from Pyrococcus horikoshii OT3 and its implications for molecular mechanism of PLP-independent racemization.
J.Mol.Biol., 319, 2002
4BH1
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H5 (tyTy) Influenza Virus Haemagglutinin in Complex with Avian Receptor Analogue 3'-SLN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Xiong, X, Coombs, P.J, Martin, S.R, Liu, J, Xiao, H, McCauley, J.W, Locher, K, Walker, P.A, Collins, P.J, Kawaoka, Y, Skehel, J.J, Gamblin, S.J.
登録日2013-03-29
公開日2013-04-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Receptor Binding by a Ferret-Transmissible H5 Avian Influenza Virus
Nature, 497, 2013
1LMR
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Solution of ADO1, a Toxin from the Assassin Bugs Agriosphodrus dohrni that Blocks the Voltage Sensitive Calcium Channel L-type
分子名称: TOXIN ADO1
著者Bernard, C, Corzo, G, Adachi-Akahane, S, Foures, G, Kanemaru, K, Furukawa, Y, Nakajima, T, Darbon, H.
登録日2002-05-02
公開日2003-08-19
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of ADO1, a toxin extracted from the saliva of the assassin bug, Agriosphodrus dohrni
Proteins: STRUCT.,FUNCT.,GENET., 54, 2004
4BGZ
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Crystal Structure of H5 (tyTy) Influenza Virus Haemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HAEMAGGLUTININ HA1, HEMAGGLUTININ, ...
著者Xiong, X, Coombs, P, Martin, S.R, Liu, J, Xiao, H, McCauley, J.W, Locher, K, Walker, P.A, Collins, P.J, Kawaoka, Y, Skehel, J.J, Gamblin, S.J.
登録日2013-03-29
公開日2013-04-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Receptor Binding by a Ferret-Transmissible H5 Avian Influenza Virus.
Nature, 497, 2013
4BH0
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H5 (tyTy) Influenza Virus Haemagglutinin in Complex with Human Receptor Analogue 6'-SLN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
著者Xiong, X, Coombs, P.J, Martin, S.R, Liu, J, Xiao, H, McCauley, J.W, Locher, K, Walker, P.A, Collins, P.J, Kawaoka, Y, Skehel, J.J, Gamblin, S.J.
登録日2013-03-29
公開日2013-04-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Receptor Binding by a Ferret-Transmissible H5 Avian Influenza Virus
Nature, 497, 2013

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