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PDB: 81 件
1BG6
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BU of 1bg6 by Molmil
CRYSTAL STRUCTURE OF THE N-(1-D-CARBOXYLETHYL)-L-NORVALINE DEHYDROGENASE FROM ARTHROBACTER SP. STRAIN 1C
分子名称: N-(1-D-CARBOXYLETHYL)-L-NORVALINE DEHYDROGENASE
著者Britton, K.L, Asano, Y, Rice, D.W.
登録日1998-06-05
公開日1999-01-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure and active site location of N-(1-D-carboxylethyl)-L-norvaline dehydrogenase.
Nat.Struct.Biol., 5, 1998
5XZQ
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BU of 5xzq by Molmil
Hydroxynitrile lyase from Passiflora edulis (PeHNL)
分子名称: Hydroxynitrile lyase
著者Motojima, F, Nuylert, A, Asano, Y.
登録日2017-07-13
公開日2017-11-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure and catalytic mechanism of hydroxynitrile lyase from passion fruit, Passiflora edulis
FEBS J., 285, 2018
1D2T
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BU of 1d2t by Molmil
CRYSTAL STRUCTURE OF ACID PHOSPHATASE FROM ESCHERICHIA BLATTAE
分子名称: ACID PHOSPHATASE, SULFATE ION
著者Ishikawa, K, Mihara, Y, Gondoh, K, Suzuki, E, Asano, Y.
登録日1999-09-28
公開日2000-12-06
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献X-ray structures of a novel acid phosphatase from Escherichia blattae and its complex with the transition-state analog molybdate.
EMBO J., 19, 2000
1EOI
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BU of 1eoi by Molmil
CRYSTAL STRUCTURE OF ACID PHOSPHATASE FROM ESCHERICHIA BLATTAE COMPLEXED WITH THE TRANSITION STATE ANALOG MOLYBDATE
分子名称: ACID PHOSPHATASE, MOLYBDATE ION
著者Ishikawa, K, Mihara, Y, Gondoh, K, Suzuki, E, Asano, Y.
登録日2000-03-23
公開日2001-03-23
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray structures of a novel acid phosphatase from Escherichia blattae and its complex with the transition-state analog molybdate.
EMBO J., 19, 2000
1IW8
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BU of 1iw8 by Molmil
Crystal Structure of a mutant of acid phosphatase from Escherichia blattae (G74D/I153T)
分子名称: SULFATE ION, acid phosphatase
著者Ishikawa, K, Mihara, Y, Shimba, N, Ohtsu, N, Kawasaki, H, Suzuki, E, Asano, Y.
登録日2002-04-22
公開日2002-09-11
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Enhancement of nucleoside phosphorylation activity in an acid phosphatase
PROTEIN ENG., 15, 2002
3RED
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BU of 3red by Molmil
3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Hydroxynitrile lyase
著者Cielo, C.B.C, Yamane, T, Asano, Y, Watanabe, N, Suzuki, A, Fukuta, Y.
登録日2011-04-04
公開日2012-06-20
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Crystal Structure of a native FAD-dependent Hydroxynitrile Lyase derived from the Japanese apricot, Prunus mume
To be Published
7YCF
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BU of 7ycf by Molmil
HYDROXYNITRILE LYASE FROM THE MILLIPEDE, Oxidus gracilis IN ACETONITRILE
分子名称: 2-HYDROXY-2-METHYLPROPANENITRILE, CHLORIDE ION, Hydroxynitrile lyase, ...
著者Chaikaew, S, Watanabe, Y, Zheng, D, Motojima, F, Asano, Y.
登録日2022-07-01
公開日2024-01-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structure-Based Site-Directed Mutagenesis of Hydroxynitrile Lyase from Cyanogenic Millipede, Oxidus gracilis for Hydrocyanation and Henry Reactions.
Chembiochem, 25, 2024
7YCB
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BU of 7ycb by Molmil
HYDROXYNITRILE LYASE FROM THE MILLIPEDE
分子名称: CHLORIDE ION, GLYCEROL, Hydroxynitrile lyase, ...
著者Chaikaew, S, Watanabe, Y, Zheng, D, Motojima, F, Asano, Y.
登録日2022-07-01
公開日2024-01-24
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structure-Based Site-Directed Mutagenesis of Hydroxynitrile Lyase from Cyanogenic Millipede, Oxidus gracilis for Hydrocyanation and Henry Reactions.
Chembiochem, 25, 2024
7YAX
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HYDROXYNITRILE LYASE FROM THE MILLIPEDE,
分子名称: CHLORIDE ION, Hydroxynitrile lyase, SULFATE ION
著者Chaikaew, S, Watanabe, Y, Zheng, D, Motojima, F, Asano, Y.
登録日2022-06-28
公開日2024-01-17
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structure-Based Site-Directed Mutagenesis of Hydroxynitrile Lyase from Cyanogenic Millipede, Oxidus gracilis for Hydrocyanation and Henry Reactions.
Chembiochem, 25, 2024
7YCT
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HYDROXYNITRILE LYASE FROM THE MILLIPEDE, Oxidus gracilis complexed with (R)-2-Chloromandelonitrile
分子名称: (2~{R})-2-(2-chlorophenyl)-2-oxidanyl-ethanenitrile, GLYCEROL, Hydroxynitrile lyase, ...
著者Chaikaew, S, Watanabe, Y, Zheng, D, Motojima, F, Asano, Y.
登録日2022-07-01
公開日2024-01-24
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structure-Based Site-Directed Mutagenesis of Hydroxynitrile Lyase from Cyanogenic Millipede, Oxidus gracilis for Hydrocyanation and Henry Reactions.
Chembiochem, 25, 2024
7YCD
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BU of 7ycd by Molmil
HYDROXYNITRILE LYASE FROM THE MILLIPEDE, Oxidus gracilis bound with (R)-(+)-ALPHA-HYDROXYBENZENE-ACETONITRILE
分子名称: (2R)-hydroxy(phenyl)ethanenitrile, Hydroxynitrile lyase, SULFATE ION
著者Chaikaew, S, Watanabe, Y, Zheng, D, Motojima, F, Asano, Y.
登録日2022-07-01
公開日2024-01-24
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structure-Based Site-Directed Mutagenesis of Hydroxynitrile Lyase from Cyanogenic Millipede, Oxidus gracilis for Hydrocyanation and Henry Reactions.
Chembiochem, 25, 2024
7YPD
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BU of 7ypd by Molmil
Discovery and characterization of a new carbonyl reductase from Rhodotorula toluroides reducing fluoroketones, and X-ray analysis of the variant by rational engineering
分子名称: Carbonyl reductase, MAGNESIUM ION
著者Watanabe, Y, Asano, Y, Hibi, M.
登録日2022-08-03
公開日2024-02-07
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Discovery and characterization of a new carbonyl reductase from Rhodotorula toluroides reducing fluoroketones, and X-ray analysis of the variant by rational engineering
To Be Published
3DXV
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BU of 3dxv by Molmil
The crystal structure of alpha-amino-epsilon-caprolactam racemase from Achromobacter obae
分子名称: Alpha-amino-epsilon-caprolactam racemase, PYRIDOXAL-5'-PHOSPHATE
著者Okazaki, S, Suzuki, A, Komeda, H, Asano, Y, Yamane, T.
登録日2008-07-25
公開日2009-02-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献The novel structure of a pyridoxal 5'-phosphate-dependent fold-type I racemase, alpha-amino-epsilon-caprolactam racemase from Achromobacter obae
Biochemistry, 48, 2009
3DXW
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BU of 3dxw by Molmil
The crystal structure of alpha-amino-epsilon-caprolactam racemase from Achromobacter obae complexed with epsilon caprolactam
分子名称: Alpha-amino-epsilon-caprolactam racemase, PYRIDOXAL-5'-PHOSPHATE, azepan-2-one
著者Okazaki, S, Suzuki, A, Komeda, H, Asano, Y, Yamane, T.
登録日2008-07-25
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献The novel structure of a pyridoxal 5'-phosphate-dependent fold-type I racemase, alpha-amino-epsilon-caprolactam racemase from Achromobacter obae
Biochemistry, 48, 2009
3RKS
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BU of 3rks by Molmil
Crystal Structure of the Manihot esculenta Hydroxynitrile Lyase (MeHNL) K176P mutant
分子名称: GLYCEROL, Hydroxynitrilase
著者Cielo, C.B.C, Yamane, T, Asano, Y, Dadashipour, M, Suzuki, A, Mizushima, T, Komeda, H.
登録日2011-04-18
公開日2012-06-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystallographic Studies of Manihot esculenta hydroxynitrile lyase Lysine-to-Proline mutants
To be Published
4Y7P
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BU of 4y7p by Molmil
Structure of alkaline D-peptidase from Bacillus cereus
分子名称: Alkaline D-peptidase, THIOCYANATE ION
著者Nakano, S, Okazaki, S, Ishitsubo, E, Kawahara, N, Komeda, H, Tokiwa, H, Asano, Y.
登録日2015-02-15
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and computational analysis of peptide recognition mechanism of class-C type penicillin binding protein, alkaline D-peptidase from Bacillus cereus DF4-B
Sci Rep, 5, 2015
4YJF
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BU of 4yjf by Molmil
Crystal structure of DAAO(Y228L/R283G) variant (S-methylbenzylamine binding form)
分子名称: (1S)-1-phenylethanamine, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Nakano, S, Yasukawa, K, Kawahara, N, Ishitsubo, E, Tokiwa, H, Asano, Y.
登録日2015-03-03
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of DAAO variant
To Be Published
4YK7
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BU of 4yk7 by Molmil
Crystal structure of S-hydroxynitrile lyase from Manihot esculenta (His103Leu)
分子名称: (S)-hydroxynitrile lyase
著者Dadashipour, M, Nakano, S, Asano, Y.
登録日2015-03-04
公開日2016-04-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of S-hydroxynitrile lyase from Manihot esculenta (His103Leu)
To Be Published
4YJD
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BU of 4yjd by Molmil
Crystal structure of DAAO(Y228L/R283G) variant (apo form)
分子名称: D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
著者Nakano, S, Yasukawa, K, Kawahara, N, Ishitsubo, E, Tokiwa, H, Asano, Y.
登録日2015-03-03
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of DAAO variant
To Be Published
4YJG
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Crystal structure of DAAO(Y228L/R283G) variant (R-3-amino 1-phenylbutane binding form)
分子名称: (2R)-4-phenylbutan-2-amine, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Nakano, S, Yasukawa, K, Kawahara, N, Ishitsubo, E, Tokiwa, H, Asano, Y.
登録日2015-03-03
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of DAAO variant
To Be Published
4YJH
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BU of 4yjh by Molmil
Crystal structure of DAAO(Y228L/R283G) variant (R-2-phenylpyrrolidine binding form)
分子名称: (2R)-2-phenylpyrrolidine, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Nakano, S, Yasukawa, K, Kawahara, N, Ishitsubo, E, Tokiwa, H, Asano, Y.
登録日2015-03-03
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of DAAO variant
To Be Published
1KKO
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BU of 1kko by Molmil
CRYSTAL STRUCTURE OF CITROBACTER AMALONATICUS METHYLASPARTATE AMMONIA LYASE
分子名称: 3-METHYLASPARTATE AMMONIA-LYASE, SULFATE ION
著者Levy, C.W, Buckley, P.A, Sedelnikova, S, Kato, Y, Asano, Y, Rice, D.W, Baker, P.J.
登録日2001-12-10
公開日2002-01-30
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Insights into enzyme evolution revealed by the structure of methylaspartate ammonia lyase.
Structure, 10, 2002
1KKR
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BU of 1kkr by Molmil
CRYSTAL STRUCTURE OF CITROBACTER AMALONATICUS METHYLASPARTATE AMMONIA LYASE CONTAINING (2S,3S)-3-METHYLASPARTIC ACID
分子名称: (2S,3S)-3-methyl-aspartic acid, 3-METHYLASPARTATE AMMONIA-LYASE, MAGNESIUM ION
著者Levy, C.W, Buckley, P.A, Sedelnikova, S, Kato, K, Asano, Y, Rice, D.W, Baker, P.J.
登録日2001-12-10
公開日2002-01-30
最終更新日2014-11-19
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Insights into enzyme evolution revealed by the structure of methylaspartate ammonia lyase.
Structure, 10, 2002
7VB6
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BU of 7vb6 by Molmil
Crystal structure of hydroxynitrile lyase from Linum usitatissium complexed with (R)-2-hydroxy-2-methylbutanenitrile
分子名称: (2R)-2-methyl-2-oxidanyl-butanenitrile, 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Zheng, D, Nakabayashi, M, Asano, Y.
登録日2021-08-30
公開日2022-02-09
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural characterization of Linum usitatissimum hydroxynitrile lyase: A new cyanohydrin decomposition mechanism involving a cyano-zinc complex.
J.Biol.Chem., 298, 2022
7VB3
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BU of 7vb3 by Molmil
Crystal structure of hydroxynitrile lyase from Linum usitatissimum
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Aliphatic (R)-hydroxynitrile lyase, ...
著者Zheng, D, Nakabayashi, M, Asano, Y.
登録日2021-08-30
公開日2022-02-09
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural characterization of Linum usitatissimum hydroxynitrile lyase: A new cyanohydrin decomposition mechanism involving a cyano-zinc complex.
J.Biol.Chem., 298, 2022

 

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