2D7E
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2d7e by Molmil](/molmil-images/mine/2d7e) | Crystal structure of N-terminal domain of PriA from E.coli | Descriptor: | Primosomal protein N' | Authors: | Sasaki, K, Ose, T, Maenaka, K, Masai, H, Kohda, D. | Deposit date: | 2005-11-18 | Release date: | 2006-11-07 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA. EMBO J., 26, 2007
|
|
1WJ0
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1wj0 by Molmil](/molmil-images/mine/1wj0) | |
1WIJ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1wij by Molmil](/molmil-images/mine/1wij) | Solution Structure of the DNA-Binding Domain of Ethylene-Insensitive3-Like3 | Descriptor: | ETHYLENE-INSENSITIVE3-like 3 protein | Authors: | Yamasaki, K, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-28 | Release date: | 2004-11-28 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of the major DNA-binding domain of Arabidopsis thaliana ethylene-insensitive3-like3. J.Mol.Biol., 348, 2005
|
|
1WID
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1wid by Molmil](/molmil-images/mine/1wid) | Solution Structure of the B3 DNA-Binding Domain of RAV1 | Descriptor: | DNA-binding protein RAV1 | Authors: | Yamasaki, K, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-28 | Release date: | 2004-11-28 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution Structure of the B3 DNA Binding Domain of the Arabidopsis Cold-Responsive Transcription Factor RAV1 Plant Cell, 16, 2004
|
|
2CZQ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2czq by Molmil](/molmil-images/mine/2czq) | A novel cutinase-like protein from Cryptococcus sp. | Descriptor: | 1,2-ETHANEDIOL, CITRIC ACID, cutinase-like protein | Authors: | Masaki, K, Kamini, N.R, Ikeda, H, Iefuji, H, Kondo, H, Suzuki, M, Tsuda, S. | Deposit date: | 2005-07-14 | Release date: | 2006-07-14 | Last modified: | 2012-06-13 | Method: | X-RAY DIFFRACTION (1.05 Å) | Cite: | Crystal structure and enhanced activity of a cutinase-like enzyme from Cryptococcus sp. strain S-2 Proteins, 77, 2009
|
|
2DWN
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2dwn by Molmil](/molmil-images/mine/2dwn) | Crystal structure of the PriA protein complexed with oligonucleotides | Descriptor: | DNA (5'-D(*A*G)-3'), Primosomal protein N' | Authors: | Sasaki, K, Ose, T, Tanaka, T, Masai, H, Maenaka, K, Kohda, D. | Deposit date: | 2006-08-15 | Release date: | 2006-11-07 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (3.35 Å) | Cite: | Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA. EMBO J., 26, 2007
|
|
4JP8
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 4jp8 by Molmil](/molmil-images/mine/4jp8) | Crystal structure of Pro-F17H/S324A | Descriptor: | CALCIUM ION, Tk-subtilisin | Authors: | Yuzaki, K, You, D.J, Uehara, R, Koga, Y, Kanaya, S. | Deposit date: | 2013-03-19 | Release date: | 2014-01-29 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.21 Å) | Cite: | Increase in activation rate of Pro-Tk-subtilisin by a single nonpolar-to-polar amino acid substitution at the hydrophobic core of the propeptide domain Protein Sci., 22, 2013
|
|
3WVF
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 3wvf by Molmil](/molmil-images/mine/3wvf) | Crystal structure of YidC from Escherichia coli | Descriptor: | Membrane protein insertase YidC | Authors: | Kumazaki, K, Tsukazaki, T, Kishimoto, T, Ishitani, R, Nureki, O. | Deposit date: | 2014-05-20 | Release date: | 2014-12-17 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | Crystal structure of Escherichia coli YidC, a membrane protein chaperone and insertase Sci Rep, 4, 2014
|
|
2DWM
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2dwm by Molmil](/molmil-images/mine/2dwm) | Crystal structure of the PriA protein complexed with oligonucleotides | Descriptor: | 5'-D(*AP*T)-3', Primosomal protein N | Authors: | Sasaki, K, Ose, T, Tanaka, T, Masai, H, Maenaka, K, Kohda, D. | Deposit date: | 2006-08-15 | Release date: | 2006-11-07 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (3.15 Å) | Cite: | Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA. EMBO J., 26, 2007
|
|
2DWL
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2dwl by Molmil](/molmil-images/mine/2dwl) | Crystal structure of the PriA protein complexed with oligonucleotides | Descriptor: | 5'-D(*AP*(DC))-3', Primosomal protein N | Authors: | Sasaki, K, Ose, T, Tanaka, T, Masai, H, Maenaka, K, Kohda, D. | Deposit date: | 2006-08-15 | Release date: | 2006-11-07 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA. EMBO J., 26, 2007
|
|
2RTS
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2rts by Molmil](/molmil-images/mine/2rts) | Chitin binding domain1 | Descriptor: | chitinase | Authors: | Uegaki, K. | Deposit date: | 2013-08-19 | Release date: | 2014-04-23 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution structure of the chitin-binding domain 1 (ChBD1) of a hyperthermophilic chitinase from Pyrococcus furiosus. J.Biochem., 155, 2014
|
|
2RRK
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2rrk by Molmil](/molmil-images/mine/2rrk) | |
3WT1
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 3wt1 by Molmil](/molmil-images/mine/3wt1) | Crystal structure of the b'-a' domain of thermophilic fungal protein disulfide isomerase (reduced form) | Descriptor: | GLYCEROL, Protein disulfide-isomerase | Authors: | Inagaki, K, Satoh, T, Itoh, S.G, Okumura, H, Kato, K. | Deposit date: | 2014-04-02 | Release date: | 2014-11-26 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Redox-dependent conformational transition of catalytic domain of protein disulfide isomerase indicated by crystal structure-based molecular dynamics simulation Chem.Phys.Lett., 618, 2015
|
|
1YSE
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1yse by Molmil](/molmil-images/mine/1yse) | Solution structure of the MAR-binding domain of SATB1 | Descriptor: | DNA-binding protein SATB1 | Authors: | Yamasaki, K, Yamaguchi, H. | Deposit date: | 2005-02-08 | Release date: | 2006-01-03 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution Structure and DNA-binding Mode of the Matrix Attachment Region-binding Domain of the Transcription Factor SATB1 That Regulates the T-cell Maturation J.Biol.Chem., 281, 2006
|
|
2KXE
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2kxe by Molmil](/molmil-images/mine/2kxe) | |
5XZK
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 5xzk by Molmil](/molmil-images/mine/5xzk) | Pholiota squarrosa lectin trimer | Descriptor: | lectin (PhoSL) | Authors: | Yamasaki, K. | Deposit date: | 2017-07-12 | Release date: | 2018-06-06 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | The trimeric solution structure and fucose-binding mechanism of the core fucosylation-specific lectin PhoSL. Sci Rep, 8, 2018
|
|
3WT2
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 3wt2 by Molmil](/molmil-images/mine/3wt2) | Crystal structure of the b'-a' domain of thermophilic fungal protein disulfide isomerase (oxidized form) | Descriptor: | Protein disulfide-isomerase | Authors: | Inagaki, K, Satoh, T, Itoh, S.G, Okumura, H, Kato, K. | Deposit date: | 2014-04-02 | Release date: | 2014-11-26 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | Redox-dependent conformational transition of catalytic domain of protein disulfide isomerase indicated by crystal structure-based molecular dynamics simulation Chem.Phys.Lett., 618, 2015
|
|
1GCF
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1gcf by Molmil](/molmil-images/mine/1gcf) | NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF THE LIGAND-BINDING REGION OF MURINE GRANULOCYTE COLONY-STIMULATING FACTOR RECEPTOR, 12 STRUCTURES | Descriptor: | GRANULOCYTE COLONY-STIMULATING FACTOR RECEPTOR | Authors: | Yamasaki, K, Naito, S, Anaguchi, H, Ohkubo, T, Ota, Y. | Deposit date: | 1997-04-10 | Release date: | 1997-10-22 | Last modified: | 2018-03-14 | Method: | SOLUTION NMR | Cite: | Solution structure of an extracellular domain containing the WSxWS motif of the granulocyte colony-stimulating factor receptor and its interaction with ligand. Nat.Struct.Biol., 4, 1997
|
|
1ISP
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1isp by Molmil](/molmil-images/mine/1isp) | Crystal structure of Bacillus subtilis lipase at 1.3A resolution | Descriptor: | GLYCEROL, lipase | Authors: | Kawasaki, K, Kondo, H, Suzuki, M, Ohgiya, S, Tsuda, S. | Deposit date: | 2001-12-19 | Release date: | 2002-12-19 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Alternate conformations observed in catalytic serine of Bacillus subtilis lipase determined at 1.3 A resolution. Acta Crystallogr.,Sect.D, 58, 2002
|
|
1GCC
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1gcc by Molmil](/molmil-images/mine/1gcc) | SOLUTION NMR STRUCTURE OF THE COMPLEX OF GCC-BOX BINDING DOMAIN OF ATERF1 AND GCC-BOX DNA, MINIMIZED AVERAGE STRUCTURE | Descriptor: | DNA (5'-D(*GP*CP*TP*GP*GP*CP*GP*GP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*CP*CP*GP*CP*CP*AP*GP*C)-3'), ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 | Authors: | Yamasaki, K, Allen, M.D, Ohme-Takagi, M, Tateno, M, Suzuki, M. | Deposit date: | 1998-03-13 | Release date: | 1999-03-23 | Last modified: | 2022-02-23 | Method: | SOLUTION NMR | Cite: | A novel mode of DNA recognition by a beta-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA. EMBO J., 17, 1998
|
|
4YVF
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 4yvf by Molmil](/molmil-images/mine/4yvf) | Structure of S-adenosyl-L-homocysteine hydrolase | Descriptor: | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2-{[5-chloro-2-(4-chlorophenoxy)phenyl](2-{[2-(methylamino)ethyl]amino}-2-oxoethyl)amino}-N-(1,3-dihydro-2H-isoindol-2-yl)-N-methylacetamide, Adenosylhomocysteinase | Authors: | Akiko, K. | Deposit date: | 2015-03-20 | Release date: | 2015-11-25 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Discovery and structural analyses of S-adenosyl-L-homocysteine hydrolase inhibitors based on non-adenosine analogs. Bioorg.Med.Chem., 23, 2015
|
|
1Y56
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1y56 by Molmil](/molmil-images/mine/1y56) | Crystal structure of L-proline dehydrogenase from P.horikoshii | Descriptor: | 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ... | Authors: | Tsuge, H, Kawakami, R, Sakuraba, H, Ago, H, Miyano, M, Aki, K, Katunuma, N, Ohshima, T. | Deposit date: | 2004-12-02 | Release date: | 2005-07-26 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.86 Å) | Cite: | Crystal structure of a novel FAD-, FMN-, and ATP-containing L-proline dehydrogenase complex from Pyrococcus horikoshii J.Biol.Chem., 280, 2005
|
|
6IUK
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6iuk by Molmil](/molmil-images/mine/6iuk) | Cryo-EM structure of Murine Norovirus capsid | Descriptor: | Major capsid protein VP1 | Authors: | Song, C, Miyazaki, N, Iwasaki, K, Katayama, K, Murata, K. | Deposit date: | 2018-11-28 | Release date: | 2020-02-26 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Dynamic rotation of the protruding domain enhances the infectivity of norovirus. Plos Pathog., 16, 2020
|
|
1CNP
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1cnp by Molmil](/molmil-images/mine/1cnp) | THE STRUCTURE OF CALCYCLIN REVEALS A NOVEL HOMODIMERIC FOLD FOR S100 CA2+-BINDING PROTEINS, NMR, 22 STRUCTURES | Descriptor: | CALCYCLIN (RABBIT, APO) | Authors: | Potts, B.C.M, Smith, J, Akke, M, Macke, T.J, Okazaki, K, Hidaka, H, Case, D.A, Chazin, W.J. | Deposit date: | 1995-08-31 | Release date: | 1996-10-14 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | The structure of calcyclin reveals a novel homodimeric fold for S100 Ca(2+)-binding proteins. Nat.Struct.Biol., 2, 1995
|
|
1UD6
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1ud6 by Molmil](/molmil-images/mine/1ud6) | Crystal structure of AmyK38 with potassium ion | Descriptor: | POTASSIUM ION, amylase | Authors: | Nonaka, T, Fujihashi, M, Kita, A, Hagihara, H, Ozaki, K, Ito, S, Miki, K. | Deposit date: | 2003-04-28 | Release date: | 2003-07-22 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites J.Biol.Chem., 278, 2003
|
|