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PDB: 304 results

4AV7
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BU of 4av7 by Molmil
Structure determination of the double mutant S233Y F250G from the sec- alkyl sulfatase PisA1
Descriptor: SEC-ALKYLSULFATASE, SULFATE ION, ZINC ION
Authors:Knaus, T, Schober, M, Faber, K, Macharaux, P, Wagner, U.
Deposit date:2012-05-24
Release date:2012-12-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and Mechanism of an Inverting Alkylsulfatase from Pseudomonas Sp. Dsm6611 Specific for Secondary Alkylsulfates.
FEBS J., 279, 2012
3W80
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BU of 3w80 by Molmil
Crystal structure of dodecamer human insulin with double C-axis length of the hexamer 2 Zn insulin cell
Descriptor: Insulin, ZINC ION
Authors:Murayoshi, M, Sasaki, K, Sakabe, N, Sakabe, K.
Deposit date:2013-03-11
Release date:2013-07-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of dodecamer insulin with double C-axis length of the hexamer 2 Zn insulin celll
To be Published
3W3E
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BU of 3w3e by Molmil
Structure of Vigna unguiculata chitinase with regulation activity of the plant cell wall
Descriptor: Cotyledoneous yieldin-like protein
Authors:Morohashi, K, Sasaki, K, Sakabe, N, Sakabe, K.
Deposit date:2012-12-20
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Three-dimensional structure analysis of Vigna unguiculata chitinase with regulation activity of the yield threshold of cell wall
To be Published
2VC6
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BU of 2vc6 by Molmil
Structure of MosA from S. meliloti with pyruvate bound
Descriptor: DIHYDRODIPICOLINATE SYNTHASE
Authors:Phenix, C.P, Nienaber, K.H, Tam, P.H, Delbaere, L.T.J, Palmer, D.R.J.
Deposit date:2007-09-18
Release date:2008-06-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural, functional and calorimetric investigation of MosA, a dihydrodipicolinate synthase from Sinorhizobium meliloti l5-30, does not support involvement in rhizopine biosynthesis.
Chembiochem, 9, 2008
3W3D
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BU of 3w3d by Molmil
Crystal structure of smooth muscle G actin DNase I complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, gamma-enteric smooth muscle, ...
Authors:Sakabe, N, Sakabe, K, Sasaki, K, Kondo, H, Shimomur, M.
Deposit date:2012-12-20
Release date:2013-01-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Refined structure and solvent network of chicken gizzard G-actin DNase 1 complex at 1.8A resolution
Acta Crystallogr.,Sect.A, 49, 1993
1Y9Z
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BU of 1y9z by Molmil
Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, SODIUM ION, ...
Authors:Dong, D, Watanabe, K.
Deposit date:2004-12-16
Release date:2006-03-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution
To be Published
1UE4
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BU of 1ue4 by Molmil
Crystal structure of d(GCGAAAGC)
Descriptor: 5'-D(*GP*CP*GP*AP*AP*AP*GP*C)-3', MAGNESIUM ION
Authors:Sunami, T, Kondo, J, Hirao, I, Watanabe, K, Miura, K, Takenaka, A.
Deposit date:2003-05-09
Release date:2004-03-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structures of d(GCGAAGC) and d(GCGAAAGC) (tetragonal form): a switching of partners of the sheared G.A pairs to form a functional G.AxA.G crossing.
Acta Crystallogr.,Sect.D, 60, 2004
1TAB
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BU of 1tab by Molmil
STRUCTURE OF THE TRYPSIN-BINDING DOMAIN OF BOWMAN-BIRK TYPE PROTEASE INHIBITOR AND ITS INTERACTION WITH TRYPSIN
Descriptor: BOWMAN-BIRK TYPE PROTEINASE INHIBITOR, TRYPSIN
Authors:Tsunogae, Y, Tanaka, I, Yamane, T, Kikkawa, J.-I, Ashida, T, Ishikawa, C, Watanabe, K, Nakamura, S, Takahashi, K.
Deposit date:1990-10-15
Release date:1992-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the trypsin-binding domain of Bowman-Birk type protease inhibitor and its interaction with trypsin.
J.Biochem.(Tokyo), 100, 1986
1TUW
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BU of 1tuw by Molmil
Structural and Functional Analysis of Tetracenomycin F2 Cyclase from Streptomyces glaucescens: A Type-II Polyketide Cyclase
Descriptor: SULFATE ION, Tetracenomycin polyketide synthesis protein tcmI
Authors:Thompson, T.B, Katayama, K, Watanabe, K, Hutchinson, C.R, Rayment, I.
Deposit date:2004-06-25
Release date:2004-08-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional analysis of tetracenomycin F2 cyclase from Streptomyces glaucescens. A type II polyketide cyclase.
J.Biol.Chem., 279, 2004
3W7Y
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BU of 3w7y by Molmil
0.92A structure of 2Zn human insulin at 100K
Descriptor: Insulin, ZINC ION
Authors:Sakabe, N, Sakabe, K, Sasaki, K, Murayoshi, M.
Deposit date:2013-03-11
Release date:2013-07-03
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:0.92A structure of 2Zn human insulin at 100K
To be Published
3W7Z
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BU of 3w7z by Molmil
1.15A structure of human 2Zn insulin at 293K
Descriptor: Insulin, ZINC ION
Authors:Hoshikawa, N, Sasaki, K, Sakabe, N, Sakabe, K.
Deposit date:2013-03-11
Release date:2013-07-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:1.15A structure of human 2Zn insulin at 293K
To be Published
6K0V
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BU of 6k0v by Molmil
Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides
Descriptor: Alpha-1,3-glucanase, CALCIUM ION, SULFATE ION, ...
Authors:Itoh, T, Intuy, R, Suyotha, W, Hayashi, J, Yano, S, Makabe, K, Wakayama, M, Hibi, T.
Deposit date:2019-05-07
Release date:2019-12-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.504 Å)
Cite:Structural insights into substrate recognition and catalysis by glycoside hydrolase family 87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11.
Febs J., 287, 2020
1IXJ
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BU of 1ixj by Molmil
Crystal Structure of d(GCGAAAGCT) Containing Parallel-stranded Duplex with Homo Base Pairs and Anti-Parallel Duplex with Watson-Crick Base pairs
Descriptor: 5'-D(*GP*CP*GP*AP*AP*AP*GP*CP*T)-3', COBALT HEXAMMINE(III), MAGNESIUM ION
Authors:Sunami, T, Kondo, J, Kobuna, T, Hirao, I, Watanabe, K, Miura, K, Takenaka, A.
Deposit date:2002-06-22
Release date:2002-12-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of d(GCGAAAGCT) Containing a Parallel-stranded Duplex with Homo Base Pairs and an Anti-Parallel Duplex with Watson-Crick Base pairs
Nucleic Acids Res., 30, 2002
7F1D
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BU of 7f1d by Molmil
Crystal Structure of BACE1 in complex with N-{3-[(4R,5R,6R)-2-amino-5-fluoro-4,6-dimethyl-5,6-dihydro-4H-1,3-thiazin-4-yl]-4-fluorophenyl}-2H,3H-[1,4]dioxino[2,3-c]pyridine-7-carboxamide
Descriptor: Beta-secretase 1, IODIDE ION, N-[3-[(4R,5R,6R)-2-azanyl-5-fluoranyl-4,6-dimethyl-5,6-dihydro-1,3-thiazin-4-yl]-4-fluoranyl-phenyl]-2,3-dihydro-[1,4]dioxino[2,3-c]pyridine-7-carboxamide
Authors:Ueno, T, Matsuoka, E, Asada, N, Yamamoto, S, Kanegawa, N, Ito, M, Ito, H, Moechars, D, Rombouts, F.J.R, Gijsen, H.J.M, Kusakabe, K.I.
Deposit date:2021-06-09
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Discovery of Extremely Selective Fused Pyridine-Derived beta-Site Amyloid Precursor Protein-Cleaving Enzyme (BACE1) Inhibitors with High In Vivo Efficacy through 10s Loop Interactions.
J.Med.Chem., 64, 2021
7F1G
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BU of 7f1g by Molmil
BACE2 xaperone complex with N-{3-[(4R,5R,6R)-2-amino-5-fluoro-4,6-dimethyl-5,6-dihydro-4H-1,3-thiazin-4-yl]-4-fluorophenyl}-2H,3H-[1,4]dioxino[2,3-c]pyridine-7-carboxamide
Descriptor: Beta-secretase 2, N-[3-[(4R,5R,6R)-2-azanyl-5-fluoranyl-4,6-dimethyl-5,6-dihydro-1,3-thiazin-4-yl]-4-fluoranyl-phenyl]-2,3-dihydro-[1,4]dioxino[2,3-c]pyridine-7-carboxamide, XAPERONE
Authors:Ueno, T, Matsuoka, E, Asada, N, Yamamoto, S, Kanegawa, N, Ito, M, Ito, H, Moechars, D, Rombouts, F.J.R, Gijsen, H.J.M, Kusakabe, K.I.
Deposit date:2021-06-09
Release date:2022-02-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Discovery of Extremely Selective Fused Pyridine-Derived beta-Site Amyloid Precursor Protein-Cleaving Enzyme (BACE1) Inhibitors with High In Vivo Efficacy through 10s Loop Interactions.
J.Med.Chem., 64, 2021
7FAO
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BU of 7fao by Molmil
Top7 surface mutant K42A Q43A K46A K57S K58S, and I68R
Descriptor: MAGNESIUM ION, Top7 Surface mutant
Authors:Ito, Y, Makabe, K.
Deposit date:2021-07-07
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Surface Engineering of Top7 to Facilitate Structure Determination.
Int J Mol Sci, 23, 2022
7FJR
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BU of 7fjr by Molmil
Structure of a mutant of OspA
Descriptor: DI(HYDROXYETHYL)ETHER, Outer surface protein A
Authors:Shiga, S, Makabe, K.
Deposit date:2021-08-04
Release date:2022-08-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:beta-Strand-mediated Domain-swapping in the Absence of Hydrophobic Core Repacking.
J.Mol.Biol., 436, 2024
1V6C
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BU of 1v6c by Molmil
Crystal Structure of Psychrophilic Subtilisin-like Protease Apa1 from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11
Descriptor: CALCIUM ION, SULFATE ION, alkaline serine protease, ...
Authors:Dong, D, Ihara, T, Motoshima, H, Watanabe, K.
Deposit date:2003-11-28
Release date:2004-12-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Psychrophilic Subtilisin-like Protease Apa1 from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11
To be Published
7FDD
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BU of 7fdd by Molmil
A Crystal structure of OspA mutant
Descriptor: DI(HYDROXYETHYL)ETHER, Outer surface protein A
Authors:Shiga, S, Makabe, K.
Deposit date:2021-07-16
Release date:2022-07-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:beta-Strand-mediated Domain-swapping in the Absence of Hydrophobic Core Repacking.
J.Mol.Biol., 436, 2024
1LZG
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BU of 1lzg by Molmil
DISSECTION OF PROTEIN-CARBOHYDRATE INTERACTIONS IN MUTANT HEN EGG-WHITE LYSOZYME COMPLEXES AND THEIR HYDROLYTIC ACTIVITY
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEN EGG WHITE LYSOZYME
Authors:Maenaka, K, Matsushima, M, Song, H, Watanabe, K, Kumagai, I.
Deposit date:1995-02-10
Release date:1995-05-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Dissection of protein-carbohydrate interactions in mutant hen egg-white lysozyme complexes and their hydrolytic activity.
J.Mol.Biol., 247, 1995
6IEI
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BU of 6iei by Molmil
Loop deletion and proline insertion mutant (deleting six residues and inserted five proline residues)
Descriptor: Outer surface protein A
Authors:Shiga, S, Makabe, K.
Deposit date:2018-09-14
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Domain-Swapping Design by Polyproline Rod Insertion.
Chembiochem, 20, 2019
6IYS
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BU of 6iys by Molmil
Loop deletion and proline insertion mutant (deleting six residues and inserted three proline residues)
Descriptor: Outer surface protein A
Authors:Shiga, S, Makabe, K.
Deposit date:2018-12-17
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Domain-Swapping Design by Polyproline Rod Insertion.
Chembiochem, 20, 2019
6AIS
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BU of 6ais by Molmil
Loop deletion mutant (deleting two residues)
Descriptor: Outer surface protein A
Authors:Shiga, S, Makabe, K.
Deposit date:2018-08-24
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Domain-Swapping Design by Polyproline Rod Insertion.
Chembiochem, 20, 2019
6ICS
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BU of 6ics by Molmil
Loop deletion mutant (deleting four residues)
Descriptor: Outer surface protein A
Authors:Shiga, S, Makabe, K.
Deposit date:2018-09-06
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Domain-Swapping Design by Polyproline Rod Insertion.
Chembiochem, 20, 2019
6IDC
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BU of 6idc by Molmil
Loop deletion and proline insertion mutant (deleting six residues and inserted six proline residues)
Descriptor: Outer surface protein A
Authors:Shiga, S, Makabe, K.
Deposit date:2018-09-09
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.007 Å)
Cite:Domain-Swapping Design by Polyproline Rod Insertion.
Chembiochem, 20, 2019

224004

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