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PDB: 89472 件

7BNN
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Open conformation of D614G SARS-CoV-2 spike with 1 Erect RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2021-01-22
公開日2021-02-03
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The effect of the D614G substitution on the structure of the spike glycoprotein of SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 118, 2021
1R0G
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mercury-substituted rubredoxin
分子名称: MERCURY (II) ION, Rubredoxin
著者Maher, M, Cross, M, Wilce, M.C.J, Guss, J.M, Wedd, A.G.
登録日2003-09-22
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Metal-substituted derivatives of the rubredoxin from Clostridium pasteurianum.
Acta Crystallogr.,Sect.D, 60, 2004
1R0I
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cadmium-substituted rubredoxin
分子名称: CADMIUM ION, Rubredoxin
著者Maher, M, Cross, M, Wilce, M.C.J, Guss, J.M, Wedd, A.G.
登録日2003-09-22
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Metal-substituted derivatives of the rubredoxin from Clostridium pasteurianum.
Acta Crystallogr.,Sect.D, 60, 2004
4EY0
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BU of 4ey0 by Molmil
Structure of tandem SH2 domains from PLCgamma1
分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1
著者Cole, A.R, Mas-Droux, C.P, Bunney, T.D, Katan, M.
登録日2012-05-01
公開日2012-10-31
最終更新日2013-06-19
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and Functional Integration of the PLCgamma Interaction Domains Critical for Regulatory Mechanisms and Signaling Deregulation.
Structure, 20, 2012
1R0J
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nickel-substituted rubredoxin
分子名称: NICKEL (II) ION, Rubredoxin
著者Maher, M, Cross, M, Wilce, M.C.J, Guss, J.M, Wedd, A.G.
登録日2003-09-22
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Metal-substituted derivatives of the rubredoxin from Clostridium pasteurianum.
Acta Crystallogr.,Sect.D, 60, 2004
6TWZ
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14-3-3 sigma complexed with a phosphorylated 16E6 peptide
分子名称: 14-3-3 protein sigma, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D(-)-TARTARIC ACID, ...
著者Gogl, G, Cousido-Siah, A, Sluchanko, N.N, Trave, G.
登録日2020-01-13
公開日2020-05-06
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Dual Specificity PDZ- and 14-3-3-Binding Motifs: A Structural and Interactomics Study.
Structure, 28, 2020
6RVM
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BU of 6rvm by Molmil
Cell division protein FtsZ from Staphylococcus aureus, apo form
分子名称: CHLORIDE ION, Cell division protein FtsZ, GLYCEROL, ...
著者Fernandez-Tornero, C, Andreu, J.M, Canosa-Valls, A.J.
登録日2019-05-31
公開日2020-02-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.155 Å)
主引用文献Nucleotide-induced folding of cell division protein FtsZ from Staphylococcus aureus.
Febs J., 287, 2020
5NDK
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BU of 5ndk by Molmil
Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Prokhorova, I, Djumagulov, M, Urzhumtsev, A, Yusupov, M, Yusupova, G.
登録日2017-03-08
公開日2017-12-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Aminoglycoside interactions and impacts on the eukaryotic ribosome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6PS6
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BU of 6ps6 by Molmil
XFEL beta2 AR structure by ligand exchange from Timolol to Timolol.
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-1-(tert-butylamino)-3-[(4-morpholin-4-yl-1,2,5-thiadiazol-3-yl)oxy]propan-2-ol, CHOLESTEROL, ...
著者Ishchenko, A, Stauch, B, Han, G.W, Batyuk, A, Shiriaeva, A, Li, C, Zatsepin, N.A, Weierstall, U, Liu, W, Nango, E, Nakane, T, Tanaka, R, Tono, K, Joti, Y, Iwata, S, Moraes, I, Gati, C, Cherezov, C.
登録日2019-07-12
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Toward G protein-coupled receptor structure-based drug design using X-ray lasers.
Iucrj, 6, 2019
8SCY
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BU of 8scy by Molmil
Lysozyme crystallized in cyclic olefin copolymer-based microfluidic chips
分子名称: Lysozyme C
著者Liu, Z, Gu, K, Shelby, M.L, Gilbile, D, Lyubimov, A.Y, Russi, S, Cohen, A.E, Coleman, M.A, Frank, M, Kuhl, T.L.
登録日2023-04-05
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A user-friendly plug-and-play cyclic olefin copolymer-based microfluidic chip for room-temperature, fixed-target serial crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
5KL9
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BU of 5kl9 by Molmil
Crystal structure of a putative acyl-CoA thioesterase EC709/ECK0725 from Escherichia coli in complex with CoA
分子名称: Acyl-CoA thioester hydrolase YbgC, COENZYME A, GLYCEROL, ...
著者Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-06-23
公開日2016-07-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Crystal structure of a putative acyl-CoA thioesterase EC709/ECK0725 from Escherichia coli in complex with CoA
To Be Published
4Z4T
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BU of 4z4t by Molmil
Crystal structure of GII.10 P domain in complex with 75mM fucose
分子名称: 1,2-ETHANEDIOL, Capsid protein, NITRATE ION, ...
著者Koromyslova, A.D, Leuthold, M.M, Hansman, G.S.
登録日2015-04-02
公開日2015-05-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The sweet quartet: Binding of fucose to the norovirus capsid.
Virology, 483, 2015
8SE5
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BU of 8se5 by Molmil
NKG2D complexed with inhibitor 14
分子名称: DI(HYDROXYETHYL)ETHER, N-{(1S)-2-[(1R,5S,6S)-6-(hydroxymethyl)-3-azabicyclo[3.1.0]hexan-3-yl]-2-oxo-1-[3-(trifluoromethyl)phenyl]ethyl}-4'-(trifluoromethyl)[1,1'-biphenyl]-2-carboxamide, NKG2-D type II integral membrane protein, ...
著者Thompson, A.A, Grant, J.C, Karpowich, N.K, Sharma, S.
登録日2023-04-08
公開日2023-10-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Development of small molecule inhibitors of natural killer group 2D receptor (NKG2D).
Bioorg.Med.Chem.Lett., 96, 2023
4MAP
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BU of 4map by Molmil
Crystal structure of Ara h 8 purified with heating
分子名称: Ara h 8 allergen, SODIUM ION
著者Offermann, L.R, Hurlburt, B.K, Majorek, K.A, McBride, J.K, Maleki, S.J, Chruszcz, M.
登録日2013-08-16
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and Function of the Peanut Panallergen Ara h 8.
J.Biol.Chem., 288, 2013
8BXA
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BU of 8bxa by Molmil
Crystal structure of ribosome binding factor A (RbfA) from S. aureus
分子名称: Ribosome-binding factor A
著者Fatkhullin, B, Bikmullin, A, Gabdulkhakov, A, Khusainov, I, Validov, S, Usachev, K, Yusupov, M.
登録日2022-12-08
公開日2023-02-22
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Yet Another Similarity between Mitochondrial and Bacterial Ribosomal Small Subunit Biogenesis Obtained by Structural Characterization of RbfA from S. aureus.
Int J Mol Sci, 24, 2023
6VLV
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BU of 6vlv by Molmil
Factor XIa in complex with compound 11
分子名称: 1-carbamimidamido-4-chloro-N-[(2R)-3-methyl-1-(morpholin-4-yl)-1-oxobutan-2-yl]isoquinoline-7-sulfonamide, CITRATE ANION, Coagulation factor XIa light chain
著者Lesburg, C.A.
登録日2020-01-27
公開日2020-05-06
最終更新日2020-10-07
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Augmenting Hit Identification by Virtual Screening Techniques in Small Molecule Drug Discovery.
J.Chem.Inf.Model., 60, 2020
5NDJ
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BU of 5ndj by Molmil
Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Prokhorova, I, Djumagulov, M, Urzhumtsev, A, Yusupov, M, Yusupova, G.
登録日2017-03-08
公開日2018-05-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Aminoglycoside interactions and impacts on the eukaryotic ribosome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7UOI
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BU of 7uoi by Molmil
Crystallographic structure of DapE from Enterococcus faecium
分子名称: GLYCEROL, ZINC ION, succinyl-diaminopimelate desuccinylase
著者Gonzalez-Segura, L, Diaz-Vilchis, A, Terrazas-Lopez, M, Diaz-Sanchez, A.G.
登録日2022-04-12
公開日2023-04-12
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The three-dimensional structure of DapE from Enterococcus faecium reveals new insights into DapE/ArgE subfamily ligand specificity.
Int.J.Biol.Macromol., 270, 2024
6VMA
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BU of 6vma by Molmil
T4H2 T cell receptor bound to HLA-A2 presenting gp100 peptide (ITDQVPFSV)
分子名称: Beta-2-microglobulin, MHC class I antigen, A-2 alpha chain, ...
著者Smith, A.R, Baker, B.M.
登録日2020-01-27
公開日2021-01-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structurally silent peptide anchor modifications allosterically modulate T cell recognition in a receptor-dependent manner
Proc.Natl.Acad.Sci.USA, 118, 2021
4J4D
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BU of 4j4d by Molmil
Structure of P51G Cyanovirin-N swapped dimer in the P21212 space group
分子名称: Cyanovirin-N
著者Koharudin, L.M.I, Liu, L, Gronenborn, A.M.
登録日2013-02-06
公開日2013-04-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Different 3D domain-swapped oligomeric cyanovirin-N structures suggest trapped folding intermediates.
Proc.Natl.Acad.Sci.USA, 110, 2013
5DGT
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BU of 5dgt by Molmil
BENZOYLFORMATE DECARBOXYLASE H70A MUTANT at pH 8.5 FROM PSEUDOMONAS PUTIDA
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2015-08-28
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.081 Å)
主引用文献BENZOYLFORMATE DECARBOXYLASE H70A MUTANT at pH 8.5 FROM PSEUDOMONAS PUTIDA
to be published
4Z7I
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Crystal structure of insulin regulated aminopeptidase in complex with ligand
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DG025 transition-state analogue enzyme inhibitor, ...
著者Mpakali, A, Saridakis, E, Harlos, K, Zhao, Y, Stratikos, E.
登録日2015-04-07
公開日2015-08-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Crystal Structure of Insulin-Regulated Aminopeptidase with Bound Substrate Analogue Provides Insight on Antigenic Epitope Precursor Recognition and Processing.
J Immunol., 195, 2015
6BOA
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BU of 6boa by Molmil
Cryo-EM structure of human TRPV6-R470E in amphipols
分子名称: Transient receptor potential cation channel subfamily V member 6
著者McGoldrick, L.L, Singh, A.K, Saotome, K, Yelshanskaya, M.V, Twomey, E.C, Grassucci, R.A, Sobolevsky, A.I.
登録日2017-11-18
公開日2017-12-20
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Opening of the human epithelial calcium channel TRPV6.
Nature, 553, 2018
3PRB
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BU of 3prb by Molmil
Structural analysis of protein folding by the Methanococcus jannaschii chaperone FKBP26
分子名称: FKBP-type peptidyl-prolyl cis-trans isomerase
著者Martinez-Hackert, E, Hendrickson, W.A.
登録日2010-11-29
公開日2011-01-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Analysis of Protein Folding by the Long-Chain Archaeal Chaperone FKBP26.
J.Mol.Biol., 407, 2011
6BOV
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Human APE1 substrate complex with an A/G mismatch adjacent the THF
分子名称: 21-mer DNA, DI(HYDROXYETHYL)ETHER, DNA-(apurinic or apyrimidinic site) lyase
著者Freudenthal, B.D, Whitaker, A.M, Fairlamb, M.S.
登録日2017-11-20
公開日2018-08-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.975 Å)
主引用文献Apurinic/apyrimidinic (AP) endonuclease 1 processing of AP sites with 5' mismatches.
Acta Crystallogr D Struct Biol, 74, 2018

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