3NDD
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1JTI
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2CWS
| Crystal structure at 1.0 A of alginate lyase A1-II', a member of polysaccharide lyase family-7 | 分子名称: | GLYCEROL, SULFATE ION, alginate lyase A1-II' | 著者 | Yamasaki, M, Ogura, K, Hashimoto, W, Mikami, B, Murata, K. | 登録日 | 2005-06-25 | 公開日 | 2005-11-15 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1 Å) | 主引用文献 | A Structural Basis for Depolymerization of Alginate by Polysaccharide Lyase Family-7 J.Mol.Biol., 352, 2005
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1UHG
| Crystal Structure of S-Ovalbumin At 1.9 Angstrom Resolution | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ovalbumin, ... | 著者 | Yamasaki, M, Takahashi, N, Hirose, M. | 登録日 | 2003-07-03 | 公開日 | 2003-07-22 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Crystal Structure of S-ovalbumin as a Non-loop-inserted Thermostabilized Serpin Form J.Biol.Chem., 278, 2003
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1VAV
| Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution | 分子名称: | Alginate lyase PA1167 | 著者 | Yamasaki, M, Moriwaki, S, Miyake, O, Hashimoto, W, Murata, K, Mikami, B. | 登録日 | 2004-02-19 | 公開日 | 2004-05-25 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure and function of a hypothetical Pseudomonas aeruginosa protein PA1167 classified into family PL-7: a novel alginate lyase with a beta-sandwich fold. J.Biol.Chem., 279, 2004
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2ZNH
| Crystal Structure of a Domain-Swapped Serpin Dimer | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antithrombin-III, ... | 著者 | Yamasaki, M, Huntington, J.A. | 登録日 | 2008-04-25 | 公開日 | 2008-10-21 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal structure of a stable dimer reveals the molecular basis of serpin polymerization Nature, 455, 2008
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3T1P
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3NDF
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7EA4
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7EBY
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4F13
| Alginate lyase A1-III Y246F complexed with tetrasaccharide | 分子名称: | 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, Alginate lyase, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid | 著者 | Mikami, B, Ban, M, Suzuki, S, Yoon, H.-J, Miyake, O, Yamasaki, M, Ogura, K, Maruyama, Y, Hashimoto, W, Murata, K. | 登録日 | 2012-05-06 | 公開日 | 2012-06-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.208 Å) | 主引用文献 | Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III Acta Crystallogr.,Sect.D, 68, 2012
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4F10
| Alginate lyase A1-III H192A complexed with tetrasaccharide | 分子名称: | 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, Alginate lyase, alpha-L-gulopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid | 著者 | Mikami, B, Ban, M, Suzuki, S, Yoon, H.-J, Miyake, O, Yamasaki, M, Ogura, K, Maruyama, Y, Hashimoto, W, Murata, K. | 登録日 | 2012-05-05 | 公開日 | 2012-06-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III Acta Crystallogr.,Sect.D, 68, 2012
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4EB1
| Hyperstable in-frame insertion variant of antithrombin | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antithrombin-III | 著者 | Martinez-Martinez, I, Johnson, D.J.D, Yamasaki, M, Corral, J, Huntington, J.A. | 登録日 | 2012-03-23 | 公開日 | 2012-07-18 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Type II antithrombin deficiency caused by a large in-frame insertion: structural, functional and pathological relevance. J.Thromb.Haemost., 10, 2012
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4E1Y
| Alginate lyase A1-III H192A apo form | 分子名称: | Alginate lyase | 著者 | Mikami, B, Ban, M, Suzuki, S, Yoon, H.-J, Miyake, O, Yamasaki, M, Ogura, K, Maruyama, Y, Hashimoto, W, Murata, K. | 登録日 | 2012-03-07 | 公開日 | 2012-04-11 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III Acta Crystallogr.,Sect.D, 68, 2012
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3IM0
| Crystal structure of Chlorella virus vAL-1 soaked in 200mM D-glucuronic acid, 10% PEG-3350, and 200mM glycine-NaOH (pH 10.0) | 分子名称: | VAL-1, beta-D-glucopyranuronic acid | 著者 | Ogura, K, Yamasaki, M, Hashidume, T, Yamada, T, Mikami, B, Hashimoto, W, Murata, K. | 登録日 | 2009-08-08 | 公開日 | 2009-10-20 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.66 Å) | 主引用文献 | Crystal structure of family 14 polysaccharide lyase with pH-dependent modes of action J.Biol.Chem., 284, 2009
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3GNE
| Crystal structure of alginate lyase vAL-1 from Chlorella virus | 分子名称: | CITRATE ANION, GLYCEROL, VAL-1 | 著者 | Ogura, K, Yamasaki, M, Hashidume, T, Yamada, T, Mikami, B, Hashimoto, W, Murata, K. | 登録日 | 2009-03-17 | 公開日 | 2009-10-20 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | Crystal structure of family 14 polysaccharide lyase with pH-dependent modes of action J.Biol.Chem., 284, 2009
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1Y3I
| Crystal Structure of Mycobacterium tuberculosis NAD kinase-NAD complex | 分子名称: | GLYCEROL, Inorganic polyphosphate/ATP-NAD kinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... | 著者 | Mori, S, Yamasaki, M, Maruyama, Y, Momma, K, Kawai, S, Hashimoto, W, Mikami, B, Murata, K. | 登録日 | 2004-11-25 | 公開日 | 2005-01-18 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | NAD-binding mode and the significance of intersubunit contact revealed by the crystal structure of Mycobacterium tuberculosis NAD kinase-NAD complex Biochem.Biophys.Res.Commun., 327, 2005
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1Y3H
| Crystal Structure of Inorganic Polyphosphate/ATP-NAD kinase from Mycobacterium tuberculosis | 分子名称: | Inorganic polyphosphate/ATP-NAD kinase | 著者 | Mori, S, Yamasaki, M, Maruyama, Y, Momma, K, kawai, S, Hashimoto, W, Mikami, B, Murata, K. | 登録日 | 2004-11-24 | 公開日 | 2005-01-18 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | NAD-binding mode and the significance of intersubunit contact revealed by the crystal structure of Mycobacterium tuberculosis NAD kinase-NAD complex BIOCHEM.BIOPHYS.RES.COMMUN., 327, 2005
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2Z42
| Crystal Structure of Family 7 Alginate Lyase A1-II' from Sphingomonas sp. A1 | 分子名称: | Alginate lyase, SULFATE ION | 著者 | Ogura, K, Yamasaki, M, Hashimoto, W, Mikami, B, Murata, K. | 登録日 | 2007-06-12 | 公開日 | 2008-05-27 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Substrate Recognition by Family 7 Alginagte Lyase from Sphingomonas sp. A1 To be published
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2ZAB
| Crystal Structure of Family 7 Alginate Lyase A1-II' Y284F in Cmplex with Product (GGG) | 分子名称: | Alginate lyase, GLYCEROL, alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid | 著者 | Ogura, K, Yamasaki, M, Mikami, B, Hashimoto, W, Murata, K. | 登録日 | 2007-10-02 | 公開日 | 2008-05-27 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.66 Å) | 主引用文献 | Substrate Recognition in Tunnel of Family 7 Alginate Lyase from Sphingomonas sp. A1 To be Published
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2Z9W
| Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxal | 分子名称: | 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE, Aspartate aminotransferase, GLYCEROL, ... | 著者 | Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T. | 登録日 | 2007-09-26 | 公開日 | 2007-11-06 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099 J.Biol.Chem., 283, 2008
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3A0N
| Crystal structure of D-glucuronic acid-bound alginate lyase vAL-1 from Chlorella virus | 分子名称: | VAL-1, beta-D-glucopyranuronic acid | 著者 | Ogura, K, Yamasaki, M, Hashidume, T, Yamada, T, Mikami, B, Hashimoto, W, Murata, K. | 登録日 | 2009-03-23 | 公開日 | 2009-10-20 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | Crystal structure of family 14 polysaccharide lyase with pH-dependent modes of action J.Biol.Chem., 284, 2009
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2ZA9
| Crystal Structure of Alginate lyase A1-II' N141C/N199C | 分子名称: | Alginate lyase, SULFATE ION | 著者 | Ogura, K, Yamasaki, M, Mikami, B, Hashimoto, W, Murata, K. | 登録日 | 2007-10-02 | 公開日 | 2008-05-27 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Substrate Recognition in Tunnel of Family 7 Alginate Lyase from Sphingomonas sp. A1 To be Published
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2Z9U
| Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti at 2.0 A resolution | 分子名称: | Aspartate aminotransferase, GLYCEROL, SULFATE ION | 著者 | Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T. | 登録日 | 2007-09-26 | 公開日 | 2007-11-06 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099 J.Biol.Chem., 283, 2008
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2Z9V
| Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxamine | 分子名称: | 4-(AMINOMETHYL)-5-(HYDROXYMETHYL)-2-METHYLPYRIDIN-3-OL, Aspartate aminotransferase, GLYCEROL, ... | 著者 | Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T. | 登録日 | 2007-09-26 | 公開日 | 2007-11-06 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099 J.Biol.Chem., 283, 2008
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