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3QMD
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BU of 3qmd by Molmil
Structural Basis of Selective Binding of Nonmethylated CpG Islands by the CXXC Domain of CFP1
Descriptor: CpG-binding protein, DNA (5'-D(*GP*CP*CP*AP*AP*CP*GP*AP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*AP*TP*CP*GP*TP*TP*GP*GP*C)-3'), ...
Authors:Lam, R, Xu, C, Bian, C.B, Kania, J, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2011-02-04
Release date:2011-02-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structural basis for selective binding of non-methylated CpG islands by the CFP1 CXXC domain.
Nat Commun, 2, 2011
4LG6
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BU of 4lg6 by Molmil
Crystal structure of ANKRA2-CCDC8 complex
Descriptor: Ankyrin repeat family A protein 2, Coiled-coil domain-containing protein 8, UNKNOWN ATOM OR ION
Authors:Xu, C, Bian, C, Tempel, W, Mackenzie, F, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-06-27
Release date:2013-09-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ankyrin Repeats of ANKRA2 Recognize a PxLPxL Motif on the 3M Syndrome Protein CCDC8.
Structure, 23, 2015
3MEW
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BU of 3mew by Molmil
Crystal structure of Novel Tudor domain-containing protein SGF29
Descriptor: SAGA-associated factor 29 homolog
Authors:Xu, C, Bian, C.B, Lam, R, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2010-03-31
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation.
Embo J., 30, 2011
6M6Z
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BU of 6m6z by Molmil
A de novo designed transmembrane nanopore, TMH4C4
Descriptor: TMH4C4
Authors:Lu, P, Xu, C, Reggiano, G, Xu, Q, DiMaio, F, Baker, D.
Deposit date:2020-03-16
Release date:2020-06-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Computational design of transmembrane pores.
Nature, 585, 2020
4R3I
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BU of 4r3i by Molmil
The crystal structure of an RNA complex
Descriptor: RNA (5'-R(*GP*GP*(6MZ)P*CP*U)-3'), UNKNOWN ATOM OR ION, YTH domain-containing protein 1
Authors:Tempel, W, Xu, C, Liu, K, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-08-15
Release date:2014-09-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for selective binding of m(6)A RNA by the YTHDC1 YTH domain.
Nat.Chem.Biol., 10, 2014
3IHO
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BU of 3iho by Molmil
The C-terminal glycosylase domain of human MBD4
Descriptor: Methyl-CpG-binding domain protein 4
Authors:Amaya, M.F, Xu, C, Bian, C.B, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2009-07-30
Release date:2009-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The C-terminal glycosylase domain of human MBD4
To be Published
4Z3C
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BU of 4z3c by Molmil
Zinc finger region of human TET3 in complex with CpG DNA
Descriptor: DNA (5'-D(*GP*CP*CP*AP*AP*CP*GP*TP*TP*GP*GP*C)-3'), Methylcytosine dioxygenase, UNKNOWN ATOM OR ION, ...
Authors:Liu, K, Xu, C, Tempel, W, Dong, A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-03-31
Release date:2015-04-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.
Structure, 2017
5VC9
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BU of 5vc9 by Molmil
Zinc finger of human CXXC4 in complex with CpG DNA
Descriptor: CXXC-type zinc finger protein 4, CpG DNA, UNKNOWN ATOM OR ION, ...
Authors:Liu, K, Xu, C, Tempel, W, Walker, J.R, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2017-03-31
Release date:2017-06-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.
Structure, 26, 2018
6O35
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BU of 6o35 by Molmil
Crystal structure of a de novo designed octameric helical-bundle protein
Descriptor: de novo designed WSHC8
Authors:Bick, M.J, Xu, C, Sankaran, B, Baker, D.
Deposit date:2019-02-25
Release date:2020-03-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Computational design of transmembrane pores.
Nature, 585, 2020
5W9Q
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BU of 5w9q by Molmil
Zinc finger region of MBD1 in complex with CpG DNA
Descriptor: Methyl-CpG-binding domain protein 1, UNKNOWN ATOM OR ION, ZINC ION, ...
Authors:Liu, K, Xu, C, Tempel, W, Walker, J.R, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2017-06-23
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.
Structure, 26, 2018
5W9S
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BU of 5w9s by Molmil
Zinc finger of human CXXC5 in complex with CpG DNA
Descriptor: CXXC-type zinc finger protein 5, CpG DNA fragment, SULFATE ION, ...
Authors:Liu, K, Xu, C, Tempel, W, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2017-06-23
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.
Structure, 26, 2018
4O64
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BU of 4o64 by Molmil
Zinc fingers of KDM2B
Descriptor: Lysine-specific demethylase 2B, UNKNOWN ATOM OR ION, ZINC ION
Authors:Liu, K, Xu, C, Tempel, W, Walker, J.R, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-12-20
Release date:2014-04-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.
Structure, 26, 2018
4RCJ
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BU of 4rcj by Molmil
Crystal structure of YTHDF1 YTH domain in complex with 5mer m6A RNA
Descriptor: RNA (5'-R(*GP*GP*(6MZ)P*CP*U)-3'), UNKNOWN ATOM OR ION, YTH domain-containing family protein 1
Authors:Tempel, W, Xu, C, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-09-16
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for the Discriminative Recognition of N6-Methyladenosine RNA by the Human YT521-B Homology Domain Family of Proteins.
J.Biol.Chem., 290, 2015
4RCM
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BU of 4rcm by Molmil
Crystal structure of the Pho92 YTH domain in complex with m6A
Descriptor: Methylated RNA-binding protein 1, RNA (5'-R(*UP*G)-D(*(6MZ)P*CP*U)-3'), UNKNOWN ATOM OR ION
Authors:Tempel, W, Xu, C, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-09-16
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for the Discriminative Recognition of N6-Methyladenosine RNA by the Human YT521-B Homology Domain Family of Proteins.
J.Biol.Chem., 290, 2015
7VXA
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BU of 7vxa by Molmil
SARS-CoV-2 Kappa variant spike protein in complex with ACE2, state C2a
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-11-24
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VX9
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BU of 7vx9 by Molmil
SARS-CoV-2 Kappa variant spike protein in complex wth ACE2, state C1
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-11-24
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VX1
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BU of 7vx1 by Molmil
SARS-CoV-2 Beta variant spike protein in open state
Descriptor: Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-11-24
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VXF
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BU of 7vxf by Molmil
SARS-CoV-2 spike protein in complex with ACE2, Beta variant, C2B state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VXE
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BU of 7vxe by Molmil
SARS-CoV-2 Kappa variant spike protein in open state
Descriptor: Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VX5
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BU of 7vx5 by Molmil
ACE2-RBD in SARS-CoV-2 Kappa variant S-ACE2 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike glycoprotein, ...
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-01
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VXD
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BU of 7vxd by Molmil
SARS-CoV-2 spike protein in complex with ACE2, Beta variant, C1 state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VX4
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BU of 7vx4 by Molmil
ACE2-RBD in SARS-CoV-2 Beta variant S-ACE2 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike glycoprotein, ...
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-01
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VXK
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BU of 7vxk by Molmil
SARS-CoV-2 spike protein in complex with ACE2, Beta variant, C2A state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-22
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VXI
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BU of 7vxi by Molmil
SARS-CoV-2 Kappa variant spike protein in transition state
Descriptor: Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-22
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VXB
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BU of 7vxb by Molmil
SARS-CoV-2 Kappa variant spike protein in C2b state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-22
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021

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數據於2024-05-15公開中

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