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1VCL
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BU of 1vcl by Molmil
Crystal Structure of Hemolytic Lectin CEL-III
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
著者Uchida, T, Yamasaki, T, Eto, S, Sugawara, H, Kurisu, G, Nakagawa, A, Kusunoki, M, Hatakeyama, T.
登録日2004-03-09
公開日2004-09-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of the Hemolytic Lectin CEL-III Isolated from the Marine Invertebrate Cucumaria echinata: IMPLICATIONS OF DOMAIN STRUCTURE FOR ITS MEMBRANE PORE-FORMATION MECHANISM
J.Biol.Chem., 279, 2004
5DE0
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BU of 5de0 by Molmil
Dye-decolorizing protein from V. cholerae
分子名称: Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE
著者Uchida, T, Sasaki, M, Tanaka, Y, Yao, M.
登録日2015-08-25
公開日2015-10-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献A Dye-Decolorizing Peroxidase from Vibrio cholerae.
Biochemistry, 54, 2015
5H6O
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BU of 5h6o by Molmil
Porphobilinogen deaminase from Vibrio Cholerae
分子名称: 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, MAGNESIUM ION, Porphobilinogen deaminase
著者Funamizu, T, Chen, M, Tanaka, Y, Ishimori, K, Uchida, T.
登録日2016-11-14
公開日2017-11-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Porphobilinogen deaminase from Vibrio Cholerae
To Be Published
1RTU
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BU of 1rtu by Molmil
USTILAGO SPHAEROGENA RIBONUCLEASE U2
分子名称: RIBONUCLEASE U2, SULFATE ION
著者Noguchi, S, Satow, Y, Uchida, T, Sasaki, C, Matsuzaki, T.
登録日1995-05-12
公開日1996-11-08
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Ustilago sphaerogena ribonuclease U2 at 1.8 A resolution.
Biochemistry, 34, 1995
1FJD
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BU of 1fjd by Molmil
HUMAN PARVULIN-LIKE PEPTIDYL PROLYL CIS/TRANS ISOMERASE, HPAR14
分子名称: PEPTIDYL PROLYL CIS/TRANS ISOMERASE (PPIASE)
著者Terada, T, Shirouzu, M, Fukumori, Y, Fujimori, F, Ito, Y, Kigawa, T, Yokoyama, S, Uchida, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2000-08-08
公開日2001-08-08
最終更新日2021-11-03
実験手法SOLUTION NMR
主引用文献Solution structure of the human parvulin-like peptidyl prolyl cis/trans isomerase, hPar14.
J.Mol.Biol., 305, 2001
5EXV
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BU of 5exv by Molmil
Crystal structure of heme binding protein HutX from Vibrio cholerae
分子名称: Hemin-degrading HemS.ChuX domain protein
著者Sekine, Y, Tanaka, Y, Uchida, T.
登録日2015-11-24
公開日2016-07-13
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献Cytoplasmic Heme-Binding Protein (HutX) from Vibrio cholerae Is an Intracellular Heme Transport Protein for the Heme-Degrading Enzyme, HutZ
Biochemistry, 55, 2016
2N9J
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BU of 2n9j by Molmil
Solution structure of oxidized human cytochrome c
分子名称: Cytochrome c, HEME C
著者Imai, M, Saio, T, Kumeta, H, Uchida, T, Inagaki, F, Ishimori, K.
登録日2015-11-24
公開日2016-02-17
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Investigation of the redox-dependent modulation of structure and dynamics in human cytochrome c.
Biochem.Biophys.Res.Commun., 469, 2016
2N9I
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Solution structure of reduced human cytochrome c
分子名称: Cytochrome c, HEME C
著者Imai, M, Saio, T, Kumeta, H, Uchida, T, Inagaki, F, Ishimori, K.
登録日2015-11-24
公開日2016-02-17
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Investigation of the redox-dependent modulation of structure and dynamics in human cytochrome c
Biochem.Biophys.Res.Commun., 469, 2016
2D3A
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BU of 2d3a by Molmil
Crystal Structure of the Maize Glutamine Synthetase complexed with ADP and Methionine sulfoximine Phosphate
分子名称: ADENOSINE-5'-DIPHOSPHATE, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, MANGANESE (II) ION, ...
著者Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M.
登録日2005-09-26
公開日2006-07-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
2D3B
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BU of 2d3b by Molmil
Crystal Structure of the Maize Glutamine Synthetase complexed with AMPPNP and Methionine sulfoximine
分子名称: (2S)-2-AMINO-4-(METHYLSULFONIMIDOYL)BUTANOIC ACID, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M.
登録日2005-09-26
公開日2006-07-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
2D3C
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BU of 2d3c by Molmil
Crystal Structure of the Maize Glutamine Synthetase complexed with ADP and Phosphinothricin Phosphate
分子名称: (2S)-2-AMINO-4-[METHYL(PHOSPHONOOXY)PHOSPHORYL]BUTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ...
著者Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M.
登録日2005-09-26
公開日2006-07-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.81 Å)
主引用文献Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
2Z48
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BU of 2z48 by Molmil
Crystal Structure of Hemolytic Lectin CEL-III Complexed with GalNac
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ...
著者Hatakeyama, T, Unno, H, Eto, S, Hidemura, H, Uchida, T, Kouzuma, Y.
登録日2007-06-13
公開日2007-10-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献C-type lectin-like carbohydrate-recognition of the hemolytic lectin CEL-III containing ricin-type beta-trefoil folds
J.Biol.Chem., 282, 2007
2Z49
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Crystal Structure of Hemolytic Lectin CEL-III Complexed with methyl-alpha-D-galactopylanoside
分子名称: CALCIUM ION, Hemolytic lectin CEL-III, MAGNESIUM ION, ...
著者Hatakeyama, T, Unno, H, Eto, S, Hidemura, H, Uchida, T, Kouzuma, Y.
登録日2007-06-13
公開日2007-10-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献C-type lectin-like carbohydrate-recognition of the hemolytic lectin CEL-III containing ricin-type beta-trefoil folds
J.Biol.Chem., 282, 2007
4X8Y
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BU of 4x8y by Molmil
Crystal structure of human PGRMC1 cytochrome b5-like domain
分子名称: Membrane-associated progesterone receptor component 1, PROTOPORPHYRIN IX CONTAINING FE
著者Nakane, T, Yamamoto, T, Shimamura, T, Kobayashi, T, Kabe, Y, Suematsu, M.
登録日2014-12-11
公開日2016-03-23
最終更新日2020-02-05
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Haem-dependent dimerization of PGRMC1/Sigma-2 receptor facilitates cancer proliferation and chemoresistance
Nat Commun, 7, 2016
2V1G
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BU of 2v1g by Molmil
Crystal structure of radiation-induced myoglobin compound II - intermediate H at pH 5.2
分子名称: GLYCEROL, HYDROXIDE ION, MYOGLOBIN, ...
著者Hersleth, H.-P, Dalhus, B, Gorbitz, C.H, Andersson, K.K.
登録日2007-05-24
公開日2007-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1H
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BU of 2v1h by Molmil
Crystal structure of radiation-induced metmyoglobin - aqua ferrous myoglobin at pH 5.2
分子名称: GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K.
登録日2007-05-24
公開日2007-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1E
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BU of 2v1e by Molmil
Crystal structure of radiation-induced myoglobin compound II - intermediate H at pH 6.8
分子名称: GLYCEROL, HYDROXIDE ION, MYOGLOBIN, ...
著者Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K.
登録日2007-05-23
公開日2007-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1F
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BU of 2v1f by Molmil
Crystal structure of radiation-induced myoglobin compound II - intermediate H at pH 8.7
分子名称: GLYCEROL, HYDROXIDE ION, MYOGLOBIN, ...
著者Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K.
登録日2007-05-24
公開日2007-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1K
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BU of 2v1k by Molmil
Crystal structure of ferrous deoxymyoglobin at pH 6.8
分子名称: GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K.
登録日2007-05-24
公開日2007-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1I
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BU of 2v1i by Molmil
Crystal structure of radiation-induced metmyoglobin - aqua ferrous myoglobin at pH 6.8
分子名称: GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K.
登録日2007-05-24
公開日2007-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1J
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BU of 2v1j by Molmil
Crystal structure of radiation-induced metmyoglobin - aqua ferrous myoglobin at pH 8.7
分子名称: GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K.
登録日2007-05-24
公開日2007-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
1WMZ
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BU of 1wmz by Molmil
Crystal Structure of C-type Lectin CEL-I complexed with N-acetyl-D-galactosamine
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ...
著者Sugawara, H, Kusunoki, M, Kurisu, G, Fujimoto, T, Aoyagi, H, Hatakeyama, T.
登録日2004-07-22
公開日2004-09-07
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis
J.Biol.Chem., 279, 2004
1WMY
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Crystal Structure of C-type Lectin CEL-I from Cucumaria echinata
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, lectin CEL-I, ...
著者Sugawara, H, Kusunoki, M, Kurisu, G, Fujimoto, T, Aoyagi, H, Hatakeyama, T.
登録日2004-07-22
公開日2004-09-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis
J.Biol.Chem., 279, 2004
5B51
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Crystal structure of heme binding protein HmuT R242A mutant
分子名称: ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
著者Muraki, N, Aono, S.
登録日2016-04-20
公開日2017-03-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016
5B4Z
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Crystal structure of heme binding protein HmuT H141A mutant
分子名称: ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
著者Muraki, N, Aono, S.
登録日2016-04-20
公開日2017-03-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016

 

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