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3VQT
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BU of 3vqt by Molmil
Crystal structure analysis of the translation factor RF3
分子名称: GUANOSINE-5'-DIPHOSPHATE, Peptide chain release factor 3
著者Kihira, K, Shomura, Y, Shibata, N, Kitamura, M, Higuchi, Y.
登録日2012-03-30
公開日2012-09-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure analysis of the translation factor RF3 (release factor 3)
Febs Lett., 586, 2012
3VR1
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BU of 3vr1 by Molmil
Crystal structure analysis of the translation factor RF3
分子名称: GUANOSINE-5',3'-TETRAPHOSPHATE, Peptide chain release factor 3
著者Kihira, K, Shomura, Y, Shibata, N, Kitamura, M, Higuchi, Y.
登録日2012-04-03
公開日2012-09-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure analysis of the translation factor RF3 (release factor 3)
Febs Lett., 586, 2012
3VM9
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BU of 3vm9 by Molmil
Dimeric horse myoglobin
分子名称: Myoglobin, OXYGEN ATOM, PROTOPORPHYRIN IX CONTAINING FE
著者Nagao, S, Osuka, H, Yamada, T, Uni, T, Shomura, Y, Imai, K, Higuchi, Y, Hirota, S.
登録日2011-12-09
公開日2012-09-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Structural and oxygen binding properties of dimeric horse myoglobin
Dalton Trans, 41, 2012
3WYO
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BU of 3wyo by Molmil
Heterodimeric myoglobin formed by domain swapping
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y.W, Nagao, S, Zhang, M, Shomura, Y, Higuchi, Y, Hirota, S.
登録日2014-09-04
公開日2014-11-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rational design of heterodimeric protein using domain swapping for myoglobin.
Angew.Chem.Int.Ed.Engl., 54, 2015
5XED
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BU of 5xed by Molmil
Heterodimer constructed from M61A PA cyt c551-HT cyt c552 and HT cyt c552-PA cyt c551 chimeric proteins
分子名称: Cytochrome c-551,Cytochrome c-552, Cytochrome c-552,Cytochrome c-551, HEME C
著者Zhang, M, Nakanishi, T, Yamanaka, M, Nagao, S, Yanagisawa, S, Shomura, Y, Shibata, N, Ogura, T, Higuchi, Y, Hirota, S.
登録日2017-04-04
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Rational Design of Domain-Swapping-Based c-Type Cytochrome Heterodimers by Using Chimeric Proteins.
Chembiochem, 18, 2017
5XVC
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BU of 5xvc by Molmil
[NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in a ferricyanide-oxidized condition
分子名称: DI(HYDROXYETHYL)ETHER, FE3-S4 CLUSTER, FE4-S4-O CLUSTER, ...
著者Nishikawa, K, Matsuura, H, Muhd Noor, N.D, Tai, H, Hirota, S, Kim, J, Kang, J, Tateno, M, Yoon, K.S, Ogo, S, Shomura, Y, Higuchi, Y.
登録日2017-06-27
公開日2018-06-27
最終更新日2019-07-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2.
Chem.Commun.(Camb.), 54, 2018
5XEC
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BU of 5xec by Molmil
Heterodimer constructed from PA cyt c551-HT cyt c552 and HT cyt c552-PA cyt c551 chimeric proteins
分子名称: Cytochrome c-551,Cytochrome c-552, Cytochrome c-552,Cytochrome c-551, HEME C
著者Zhang, M, Nakanishi, T, Yamanaka, M, Nagao, S, Yanagisawa, S, Shomura, Y, Shibata, N, Ogura, T, Higuchi, Y, Hirota, S.
登録日2017-04-04
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Rational Design of Domain-Swapping-Based c-Type Cytochrome Heterodimers by Using Chimeric Proteins.
Chembiochem, 18, 2017
5XVD
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BU of 5xvd by Molmil
[NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in an air-oxidized condition
分子名称: FE3-S4 CLUSTER, FE4-S4-O CLUSTER, GLYCEROL, ...
著者Nishikawa, K, Matsuura, H, Muhd Noor, N.D, Tai, H, Hirota, S, Kim, J, Kang, J, Tateno, M, Yoon, K.S, Ogo, S, Shomura, Y, Higuchi, Y.
登録日2017-06-27
公開日2018-06-27
最終更新日2019-07-10
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2.
Chem.Commun.(Camb.), 54, 2018
5XVB
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BU of 5xvb by Molmil
[NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in an H2-reduced condition
分子名称: FE3-S4 CLUSTER, GLYCEROL, IRON/SULFUR CLUSTER, ...
著者Nishikawa, K, Matsuura, H, Muhd Noor, N.D, Tai, H, Hirota, S, Kim, J, Kang, J, Tateno, M, Yoon, K.S, Ogo, S, Shomura, Y, Higuchi, Y.
登録日2017-06-27
公開日2018-06-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2.
Chem.Commun.(Camb.), 54, 2018
3ABQ
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BU of 3abq by Molmil
Crystal structure of ethanolamine ammonia-lyase from Escherichia coli complexed with CN-Cbl and 2-amino-1-propanol
分子名称: (2S)-2-aminopropan-1-ol, COBALAMIN, Ethanolamine ammonia-lyase heavy chain, ...
著者Shibata, N.
登録日2009-12-21
公開日2010-06-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures of ethanolamine ammonia-lyase complexed with coenzyme B12 analogs and substrates.
J.Biol.Chem., 285, 2010
3ABR
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BU of 3abr by Molmil
Crystal structure of ethanolamine ammonia-lyase from Escherichia coli complexed with CN-Cbl (substrate-free form)
分子名称: COBALAMIN, Ethanolamine ammonia-lyase heavy chain, Ethanolamine ammonia-lyase light chain, ...
著者Shibata, N.
登録日2009-12-21
公開日2010-06-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of ethanolamine ammonia-lyase complexed with coenzyme B12 analogs and substrates.
J.Biol.Chem., 285, 2010
3ABO
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BU of 3abo by Molmil
Crystal structure of ethanolamine ammonia-lyase from Escherichia coli complexed with CN-Cbl and ethanolamine
分子名称: COBALAMIN, ETHANOLAMINE, Ethanolamine ammonia-lyase heavy chain, ...
著者Shibata, N.
登録日2009-12-21
公開日2010-06-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of ethanolamine ammonia-lyase complexed with coenzyme B12 analogs and substrates.
J.Biol.Chem., 285, 2010
3ABS
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BU of 3abs by Molmil
Crystal structure of ethanolamine ammonia-lyase from Escherichia coli complexed with adeninylpentylcobalamin and ethanolamine
分子名称: CO-(ADENIN-9-YL-PENTYL)-COBALAMIN, ETHANOLAMINE, Ethanolamine ammonia-lyase heavy chain, ...
著者Shibata, N.
登録日2009-12-21
公開日2010-06-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structures of ethanolamine ammonia-lyase complexed with coenzyme B12 analogs and substrates.
J.Biol.Chem., 285, 2010
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