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Structure of the GTP-binding protein TrmE from Thermotoga maritima
分子名称:	Probable tRNA modification GTPase trmE, SULFATE ION
著者	Scrima, A, Vetter, I.R, Armengod, M.E, Wittinghofer, A.
登録日	2004-11-12
公開日	2005-01-04
最終更新日	2024-03-13
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	The structure of the TrmE GTP-binding protein and its implications for tRNA modification Embo J., 24, 2005

1XZQ

Structure of the GTP-binding protein TrmE from Thermotoga maritima complexed with 5-formyl-THF
分子名称:	N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid, Probable tRNA modification GTPase trmE
著者	Scrima, A, Vetter, I.R, Armengod, M.E, Wittinghofer, A.
登録日	2004-11-12
公開日	2005-01-04
最終更新日	2024-03-13
実験手法	X-RAY DIFFRACTION (2.9 Å)
主引用文献	The structure of the TrmE GTP-binding protein and its implications for tRNA modification Embo J., 24, 2005

3BRW

Structure of the Rap-RapGAP complex
分子名称:	BERYLLIUM TRIFLUORIDE ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者	Scrima, A, Thomas, C, Deaconescu, D, Wittinghofer, A.
登録日	2007-12-21
公開日	2008-03-11
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (3.4 Å)
主引用文献	The Rap-RapGAP complex: GTP hydrolysis without catalytic glutamine and arginine residues Embo J., 27, 2008

3EI2

Structure of hsDDB1-drDDB2 bound to a 16 bp abasic site containing DNA-duplex
分子名称:	5'-D(DAPDAPDAPDTPDGPDAPDAPDTP(3DR)PDAPDAPDGPDCPDAPDGPDG)-3', 5'-D(DCPDCPDTPDGPDCPDTPDTPDTPDAPDTPDTPDCPDAPDTPDTPDT)-3', DNA damage-binding protein 1, ...
著者	Scrima, A, Thoma, N.H.
登録日	2008-09-15
公開日	2009-01-20
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (2.6 Å)
主引用文献	Structural basis of UV DNA-damage recognition by the DDB1-DDB2 complex. Cell(Cambridge,Mass.), 135, 2008

3EI4

Structure of the hsDDB1-hsDDB2 complex
分子名称:	DNA damage-binding protein 1, DNA damage-binding protein 2
著者	Scrima, A, Pavletich, N.P, Thoma, N.H.
登録日	2008-09-15
公開日	2009-01-20
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (3.3 Å)
主引用文献	Structural basis of UV DNA-damage recognition by the DDB1-DDB2 complex. Cell(Cambridge,Mass.), 135, 2008

3EI3

Structure of the hsDDB1-drDDB2 complex
分子名称:	DNA damage-binding protein 1, DNA damage-binding protein 2, TETRAETHYLENE GLYCOL
著者	Scrima, A, Thoma, N.H.
登録日	2008-09-15
公開日	2009-01-20
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Structural basis of UV DNA-damage recognition by the DDB1-DDB2 complex. Cell(Cambridge,Mass.), 135, 2008

3EI1

Structure of hsDDB1-drDDB2 bound to a 14 bp 6-4 photoproduct containing DNA-duplex
分子名称:	5'-D(DAPDCPDGPDCPDGPDAP(64T)P(5PY)PDGPDCPDGPDCPDCPDC)-3', 5'-D(DTPDGPDGPDGPDCPDGPDCPDAPDAPDTPDCPDGPDCPDG)-3', DNA damage-binding protein 1, ...
著者	Scrima, A, Thoma, N.H.
登録日	2008-09-15
公開日	2009-01-20
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (2.8 Å)
主引用文献	Structural basis of UV DNA-damage recognition by the DDB1-DDB2 complex. Cell(Cambridge,Mass.), 135, 2008

2GJ9

Structure of the MnmE G-domain in complex with GDP*AlF4-, Mg2+ and Rb+
分子名称:	GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RUBIDIUM ION, ...
著者	Scrima, A, Wittinghofer, A.
登録日	2006-03-30
公開日	2006-07-04
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Dimerisation-dependent GTPase reaction of MnmE: how potassium acts as GTPase-activating element. Embo J., 25, 2006

2GJ8

Structure of the MnmE G-domain in complex with GDP*AlF4-, Mg2+ and K+
分子名称:	GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ...
著者	Scrima, A, Wittinghofer, A.
登録日	2006-03-30
公開日	2006-07-04
最終更新日	2011-07-13
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	Dimerisation-dependent GTPase reaction of MnmE: how potassium acts as GTPase-activating element. Embo J., 25, 2006

2GJA

Structure of the MnmE G-domain in complex with GDP*AlF4-, Mg2+ and NH4+
分子名称:	AMMONIUM ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者	Scrima, A, Wittinghofer, A.
登録日	2006-03-30
公開日	2006-07-04
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (1.85 Å)
主引用文献	Dimerisation-dependent GTPase reaction of MnmE: how potassium acts as GTPase-activating element. Embo J., 25, 2006

4A09

Structure of hsDDB1-drDDB2 bound to a 15 bp CPD-duplex (purine at D-1 position) at 3.1 A resolution (CPD 2)
分子名称:	5'-D(CPCPTPGPCPTPCPCPTPTPTPCPAPCPCPC)-3', 5'-D(GPGPTPGPAPAPAP(TTD)PAPGPCPAPGPGP)-3', CALCIUM ION, ...
著者	Scrima, A, Fischer, E.S, Iwai, S, Gut, H, Thoma, N.H.
登録日	2011-09-08
公開日	2011-11-30
最終更新日	2023-12-20
実験手法	X-RAY DIFFRACTION (3.1 Å)
主引用文献	The Molecular Basis of Crl4(Ddb2/Csa) Ubiquitin Ligase Architecture, Targeting, and Activation Cell(Cambridge,Mass.), 147, 2011

4A0A

Structure of hsDDB1-drDDB2 bound to a 16 bp CPD-duplex (pyrimidine at D-1 position) at 3.6 A resolution (CPD 3)
分子名称:	5'-D(CPCPTPGPCPTPCPCPTPTPTPCPAPCPCPC)-3', 5'-D(GPGPTPGPAPAPAP(TTD)PAPGPCPAPGPDGP)-3', CALCIUM ION, ...
著者	Scrima, A, Fischer, E.S, Iwai, S, Gut, H, Thoma, N.H.
登録日	2011-09-08
公開日	2011-11-30
最終更新日	2023-12-20
実験手法	X-RAY DIFFRACTION (3.6 Å)
主引用文献	The Molecular Basis of Crl4(Ddb2/Csa) Ubiquitin Ligase Architecture, Targeting, and Activation Cell(Cambridge,Mass.), 147, 2011

4A0B

Structure of hsDDB1-drDDB2 bound to a 16 bp CPD-duplex (pyrimidine at D-1 position) at 3.8 A resolution (CPD 4)
分子名称:	5'-D(CPCPTPGPCPTPCPCPTPTPTPCPAPCPCPC)-3', 5'-D(DGPGPTPGPAPAPAP(TTD)PAPGPCPAPGPDGP)-3', DNA DAMAGE-BINDING PROTEIN 1, ...
著者	Scrima, A, Fischer, E.S, Iwai, S, Gut, H, Thoma, N.H.
登録日	2011-09-08
公開日	2011-11-30
最終更新日	2023-12-20
実験手法	X-RAY DIFFRACTION (3.8 Å)
主引用文献	The Molecular Basis of Crl4(Ddb2/Csa) Ubiquitin Ligase Architecture, Targeting, and Activation Cell(Cambridge,Mass.), 147, 2011

4A0C

Structure of the CAND1-CUL4B-RBX1 complex
分子名称:	CULLIN-4B, CULLIN-ASSOCIATED NEDD8-DISSOCIATED PROTEIN 1, E3 UBIQUITIN-PROTEIN LIGASE RBX1, ...
著者	Scrima, A, Fischer, E.S, Faty, M, Gut, H, Thoma, N.H.
登録日	2011-09-08
公開日	2011-11-30
最終更新日	2023-12-20
実験手法	X-RAY DIFFRACTION (3.8 Å)
主引用文献	The Molecular Basis of Crl4(Ddb2/Csa) Ubiquitin Ligase Architecture, Targeting, and Activation Cell(Cambridge,Mass.), 147, 2011

4A08

Structure of hsDDB1-drDDB2 bound to a 13 bp CPD-duplex (purine at D-1 position) at 3.0 A resolution (CPD 1)
分子名称:	2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(APCPGPCPGPAP(TTD)PGPCPGPCPCPC)-3', 5'-D(TPGPGPGPCPGPCPCPCPTPCPGPCP*G)-3', ...
著者	Scrima, A, Fischer, E.S, Iwai, S, Gut, H, Thoma, N.H.
登録日	2011-09-08
公開日	2011-11-30
最終更新日	2023-12-20
実験手法	X-RAY DIFFRACTION (3 Å)
主引用文献	The Molecular Basis of Crl4(Ddb2/Csa) Ubiquitin Ligase Architecture, Targeting, and Activation Cell(Cambridge,Mass.), 147, 2011

3CP2

Crystal structure of GidA from E. coli
分子名称:	SULFATE ION, tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA
著者	Scrima, A, Meyer, S, Versees, W, Wittinghofer, A.
登録日	2008-03-30
公開日	2008-06-24
最終更新日	2024-03-13
実験手法	X-RAY DIFFRACTION (2.9 Å)
主引用文献	Crystal structures of the conserved tRNA-modifying enzyme GidA: implications for its interaction with MnmE and substrate J.Mol.Biol., 380, 2008

6I0I

Structure of the streptomyces subtilisin and TAMP inhibitor (SSTI)
分子名称:	Transglutaminase-activating metalloprotease inhibitor
著者	Schmelz, S, Juettner, N.E, Fuchsbauer, H.L, Scrima, A.
登録日	2018-10-26
公開日	2019-09-04
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (1.448 Å)
主引用文献	The N-terminal peptide of the transglutaminase-activating metalloprotease inhibitor from Streptomyces mobaraensis accommodates both inhibition and glutamine cross-linking sites. Febs J., 287, 2020

5FZP

Structure of the dispase autolysis inducing protein from Streptomyces mobaraensis
分子名称:	CALCIUM ION, DISPASE AUTOLYSIS-INDUCING PROTEIN, GLYCEROL
著者	Schmelz, S, Fiebig, D, Beck, J, Fuchsbauer, H.L, Scrima, A.
登録日	2016-03-15
公開日	2016-08-10
最終更新日	2016-10-05
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	Structure of the Dispase Autolysis Inducing Protein from Streptomyces Mobaraensis and Glutamine Cross-Linking Sites for Transglutaminase J.Biol.Chem., 291, 2016

2NTX

Prone8
分子名称:	Emb\|CAB41934.1
著者	Thomas, C, Fricke, I, Scrima, A, Berken, A, Wittinghofer, A.
登録日	2006-11-08
公開日	2007-01-23
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Structural Evidence for a Common Intermediate in Small G Protein-GEF Reactions Mol.Cell, 25, 2007

2NTY

Rop4-GDP-PRONE8
分子名称:	Emb\|CAB41934.1, GUANOSINE-5'-DIPHOSPHATE, Rac-like GTP-binding protein ARAC5
著者	Thomas, C, Fricke, I, Scrima, A, Berken, A, Wittinghofer, A.
登録日	2006-11-08
公開日	2007-01-23
最終更新日	2023-10-25
実験手法	X-RAY DIFFRACTION (3.1 Å)
主引用文献	Structural Evidence for a Common Intermediate in Small G Protein-GEF Reactions Mol.Cell, 25, 2007

2BAP

Crystal structure of the N-terminal mDia1 Armadillo Repeat Region and Dimerisation Domain in complex with the mDia1 autoregulatory domain (DAD)
分子名称:	Diaphanous protein homolog 1
著者	Lammers, M, Rose, R, Scrima, A, Wittinghofer, A.
登録日	2005-10-14
公開日	2006-03-07
最終更新日	2023-08-23
実験手法	X-RAY DIFFRACTION (3.3 Å)
主引用文献	*The regulation of mDia1 by autoinhibition and its release by RhoGTP.** Embo J., 24, 2005

6XZ5

RovC - regulator of virulence interconnected with the Csr system
分子名称:	SULFATE ION, Uncharacterized protein,RovC,Uncharacterized protein
著者	Sadana, P, Scrima, A.
登録日	2020-02-02
公開日	2020-09-16
最終更新日	2020-10-07
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	RovC - a novel type of hexameric transcriptional activator promoting type VI secretion gene expression. Plos Pathog., 16, 2020

5KE1

Structure of a C-terminal fragment of the IcsA/VirG passenger-domain
分子名称:	NICKEL (II) ION, Outer membrane protein IcsA autotransporter
著者	Leupold, S, Scrima, A.
登録日	2016-06-09
公開日	2017-03-15
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Structural insights into the architecture of the Shigella flexneri virulence factor IcsA/VirG and motifs involved in polar distribution and secretion. J. Struct. Biol., 198, 2017

5LDY

Structure of Yersinia pseudotuberculosis InvD
分子名称:	Ig domain protein group 1 domain protein, PHOSPHATE ION
著者	Sadana, P, Scrima, A.
登録日	2016-06-28
公開日	2017-06-14
最終更新日	2020-06-17
実験手法	X-RAY DIFFRACTION (2.6 Å)
主引用文献	The invasin D protein from Yersinia pseudotuberculosis selectively binds the Fab region of host antibodies and affects colonization of the intestine J.Biol.Chem., 2018

5N40

Structure of Yersinia pseudotuberculosis adhesin InvE
分子名称:	DI(HYDROXYETHYL)ETHER, Putative invasin
著者	Sadana, P, Scrima, A.
登録日	2017-02-09
公開日	2017-04-12
最終更新日	2017-06-07
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	Structure of the Y. pseudotuberculosis adhesin InvasinE. Protein Sci., 26, 2017

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