3B21
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3WDZ
| Crystal Structure of Keap1 in Complex with phosphorylated p62 | 分子名称: | Kelch-like ECH-associated protein 1, Peptide from Sequestosome-1 | 著者 | Fukutomi, T, Takagi, K, Mizushima, T, Tanaka, K, Komatsu, M, Yamamoto, M. | 登録日 | 2013-06-26 | 公開日 | 2013-09-04 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Phosphorylation of p62 activates the Keap1-Nrf2 pathway during selective autophagy. Mol.Cell, 51, 2013
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3WSO
| Crystal structure of the Skp1-FBG3 complex | 分子名称: | F-box only protein 44, S-phase kinase-associated protein 1 | 著者 | Kumanomidou, T, Nishio, K, Takagi, K, Nakagawa, T, Suzuki, A, Yamane, T, Tokunaga, F, Iwai, K, Murakami, A, Yoshida, Y, Tanaka, K, Mizushima, T. | 登録日 | 2014-03-18 | 公開日 | 2015-03-25 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | The Structural Differences between a Glycoprotein Specific F-Box Protein Fbs1 and Its Homologous Protein FBG3 Plos One, 10, 2015
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2EFX
| The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with L-phenylalanine amide | 分子名称: | BARIUM ION, D-amino acid amidase, PHENYLALANINE AMIDE | 著者 | Okazaki, S, Suzuki, A, Mizushima, T, Komeda, H, Asano, Y, Yamane, T. | 登録日 | 2007-02-26 | 公開日 | 2007-03-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structures of D-amino-acid amidase complexed with L-phenylalanine and with L-phenylalanine amide: insight into the D-stereospecificity of D-amino-acid amidase from Ochrobactrum anthropi SV3. Acta Crystallogr.,Sect.D, 64, 2008
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2EFU
| The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with L-phenylalanine | 分子名称: | BARIUM ION, D-Amino acid amidase, PHENYLALANINE | 著者 | Okazaki, S, Suzuki, A, Mizushima, T, Komeda, H, Asano, Y, Yamane, T. | 登録日 | 2007-02-26 | 公開日 | 2007-03-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structures of D-amino-acid amidase complexed with L-phenylalanine and with L-phenylalanine amide: insight into the D-stereospecificity of D-amino-acid amidase from Ochrobactrum anthropi SV3. Acta Crystallogr.,Sect.D, 64, 2008
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2GGS
| crystal structure of hypothetical dTDP-4-dehydrorhamnose reductase from sulfolobus tokodaii | 分子名称: | 273aa long hypothetical dTDP-4-dehydrorhamnose reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 著者 | Rajakannan, V, Mizushima, T, Suzuki, A, Masui, R, Kuramitsu, S, Yamane, T. | 登録日 | 2006-03-24 | 公開日 | 2007-03-24 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | crystal structure of hypothetical dTDP-4-dehydrorhamnose reductase from sulfolobus tokodaii To be published
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3VR0
| Crystal structure of Pyrococcus furiosus PbaB, an archaeal proteasome activator | 分子名称: | GOLD ION, Putative uncharacterized protein | 著者 | Kumoi, K, Satoh, T, Hiromoto, T, Mizushima, T, Kamiya, Y, Noda, M, Uchiyama, S, Murata, K, Yagi, H, Kato, K. | 登録日 | 2012-04-02 | 公開日 | 2013-04-03 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | An archaeal homolog of proteasome assembly factor functions as a proteasome activator Plos One, 8, 2013
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3WHJ
| Crystal structure of Nas2 N-terminal domain | 分子名称: | CADMIUM ION, Probable 26S proteasome regulatory subunit p27, SULFATE ION | 著者 | Satoh, T, Saeki, Y, Hiromoto, T, Wang, Y.-H, Uekusa, Y, Yagi, H, Yoshihara, H, Yagi-Utsumi, M, Mizushima, T, Tanaka, K, Kato, K. | 登録日 | 2013-08-26 | 公開日 | 2014-03-26 | 最終更新日 | 2022-08-24 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | Structural basis for proteasome formation controlled by an assembly chaperone nas2. Structure, 22, 2014
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3WHK
| Crystal structure of PAN-Rpt5C chimera | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A | 著者 | Satoh, T, Saeki, Y, Hiromoto, T, Wang, Y.-H, Uekusa, Y, Yagi, H, Yoshihara, H, Yagi-Utsumi, M, Mizushima, T, Tanaka, K, Kato, K. | 登録日 | 2013-08-26 | 公開日 | 2014-03-26 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Structural basis for proteasome formation controlled by an assembly chaperone nas2. Structure, 22, 2014
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3WHL
| Crystal structure of Nas2 N-terminal domain complexed with PAN-Rpt5C chimera | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, Probable 26S proteasome regulatory subunit p27, Proteasome-activating nucleotidase, ... | 著者 | Satoh, T, Saeki, Y, Hiromoto, T, Wang, Y.-H, Uekusa, Y, Yagi, H, Yoshihara, H, Yagi-Utsumi, M, Mizushima, T, Tanaka, K, Kato, K. | 登録日 | 2013-08-26 | 公開日 | 2014-03-26 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (4 Å) | 主引用文献 | Structural basis for proteasome formation controlled by an assembly chaperone nas2. Structure, 22, 2014
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3A7S
| Catalytic domain of UCH37 | 分子名称: | CHLORIDE ION, Ubiquitin carboxyl-terminal hydrolase isozyme L5 | 著者 | Nishio, K, Kim, S.W, Kawai, K, Mizushima, T, Yamane, T, Hamazaki, J, Murata, S, Tanaka, K. | 登録日 | 2009-10-04 | 公開日 | 2009-11-03 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of the de-ubiquitinating enzyme UCH37 (human UCH-L5) catalytic domain Biochem.Biophys.Res.Commun., 2009
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3ACP
| Crystal Structure of Yeast Rpn14, a Chaperone of the 19S Regulatory Particle of the Proteasome | 分子名称: | WD repeat-containing protein YGL004C | 著者 | Kim, S, Saeki, Y, Suzuki, A, Takagi, K, Fukunaga, K, Yamane, T, Kato, K, Tanaka, K, Mizushima, T. | 登録日 | 2010-01-08 | 公開日 | 2010-03-16 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of yeast Rpn14, a chaperone of the 19S regulatory particle of the proteasome J.Biol.Chem., 285, 2010
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3WN7
| Crystal Structure of Keap1 in Complex with the N-terminal region of the Nrf2 transcription factor | 分子名称: | ACETATE ION, Kelch-like ECH-associated protein 1, Peptide from Nuclear factor erythroid 2-related factor 2 | 著者 | Fukutomi, T, Takagi, K, Mizushima, T, Ohuchi, N, Yamamoto, M. | 登録日 | 2013-12-05 | 公開日 | 2013-12-25 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.57 Å) | 主引用文献 | Kinetic, thermodynamic, and structural characterizations of the association between Nrf2-DLGex degron and Keap1 Mol.Cell.Biol., 34, 2014
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3X3H
| Crystal Structure of the Manihot esculenta Hydroxynitrile Lyase (MeHNL) 3KP (K176P, K199P, K224P) triple mutant | 分子名称: | (S)-hydroxynitrile lyase | 著者 | Cielo, C.B.C, Yamane, T, Asano, Y, Dadashipour, M, Suzuki, A, Mizushima, T, Komeda, H, Okazaki, S. | 登録日 | 2015-01-21 | 公開日 | 2016-03-02 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.88 Å) | 主引用文献 | Crystallographic Studies of Manihot esculenta hydroxynitrile lyase Lysine-to-Proline mutants TO BE PUBLISHED
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3W31
| Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI | 分子名称: | IODIDE ION, ORF169b, Ubiquitin-conjugating enzyme E2 N | 著者 | Nishide, A, Kim, M, Takagi, K, Sasakawa, C, Mizushima, T. | 登録日 | 2012-12-07 | 公開日 | 2013-03-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.96 Å) | 主引用文献 | Structural basis for the recognition of Ubc13 by the Shigella flexneri effector OspI. J.Mol.Biol., 425, 2013
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3W30
| Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI | 分子名称: | ORF169b | 著者 | Nishide, A, Kim, M, Takagi, K, Sasakawa, C, Mizushima, T. | 登録日 | 2012-12-07 | 公開日 | 2013-03-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.99 Å) | 主引用文献 | Structural Basis for the Recognition of Ubc13 by the Shigella flexneri Effector OspI. J.Mol.Biol., 425, 2013
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3A4U
| Crystal structure of MCFD2 in complex with carbohydrate recognition domain of ERGIC-53 | 分子名称: | CALCIUM ION, GLYCEROL, Multiple coagulation factor deficiency protein 2, ... | 著者 | Nishio, M, Kamiya, Y, Mizushima, T, Wakatsuki, S, Sasakawa, H, Yamamoto, K, Uchiyama, S, Noda, M, McKay, A.R, Fukui, K, Hauri, H.P, Kato, K. | 登録日 | 2009-07-17 | 公開日 | 2010-01-05 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | 主引用文献 | Structural basis for the cooperative interplay between the two causative gene products of combined factor V and factor VIII deficiency. Proc.Natl.Acad.Sci.USA, 107, 2010
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3VLE
| Crystal structure of yeast proteasome interacting protein | 分子名称: | DNA mismatch repair protein HSM3 | 著者 | Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T. | 登録日 | 2011-12-01 | 公開日 | 2012-02-22 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.41 Å) | 主引用文献 | Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3 J.Biol.Chem., 287, 2012
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3VLD
| Crystal structure of yeast proteasome interacting protein | 分子名称: | DNA mismatch repair protein HSM3 | 著者 | Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T. | 登録日 | 2011-12-01 | 公開日 | 2012-02-22 | 最終更新日 | 2012-04-18 | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | 主引用文献 | Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3 J.Biol.Chem., 287, 2012
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3VLF
| Crystal structure of yeast proteasome interacting protein | 分子名称: | 26S protease regulatory subunit 7 homolog, DNA mismatch repair protein HSM3 | 著者 | Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T. | 登録日 | 2011-12-01 | 公開日 | 2012-02-22 | 最終更新日 | 2023-12-06 | 実験手法 | X-RAY DIFFRACTION (3.8 Å) | 主引用文献 | Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3 J.Biol.Chem., 287, 2012
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3VL1
| Crystal structure of yeast Rpn14 | 分子名称: | 26S proteasome regulatory subunit RPN14 | 著者 | Kim, S, Nishide, A, Saeki, Y, Takagi, K, Tanaka, K, Kato, K, Mizushima, T. | 登録日 | 2011-11-28 | 公開日 | 2012-05-02 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | New crystal structure of the proteasome-dedicated chaperone Rpn14 at 1.6 A resolution Acta Crystallogr.,Sect.F, 68, 2012
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3WRI
| Crystal structure of P450cam | 分子名称: | CAMPHOR, Camphor 5-monooxygenase, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H. | 登録日 | 2014-02-25 | 公開日 | 2015-03-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Structure of P450cam intermediate To be Published
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3WRM
| Crystal structure of P450cam | 分子名称: | CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ... | 著者 | Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H. | 登録日 | 2014-02-25 | 公開日 | 2015-03-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Structure of P450cam intermedite To be published
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3WRJ
| Crystal structure of P450cam | 分子名称: | CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ... | 著者 | Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H. | 登録日 | 2014-02-25 | 公開日 | 2015-03-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Structure of P450cam intermedite to be published
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3WXR
| Yeast 20S proteasome with a mutation of alpha7 subunit | 分子名称: | Probable proteasome subunit alpha type-7, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ... | 著者 | Yashiroda, H, Toda, Y, Otsu, S, Takagi, K, Mizushima, T, Murata, S. | 登録日 | 2014-08-06 | 公開日 | 2014-10-22 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3.15 Å) | 主引用文献 | N-terminal alpha 7 deletion of the proteasome 20S core particle substitutes for yeast PI31 function Mol.Cell.Biol., 35, 2015
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