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1UA8
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BU of 1ua8 by Molmil
Crystal structure of the lipoprotein localization factor, LolA
分子名称: Outer-membrane lipoproteins carrier protein
著者Takeda, K, Miyatake, H, Yokota, N, Matsuyama, S, Tokuda, H, Miki, K.
登録日2003-03-04
公開日2003-07-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of bacterial lipoprotein localization factors, LolA and LolB.
Embo J., 22, 2003
1UD4
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BU of 1ud4 by Molmil
Crystal structure of calcium free alpha amylase from Bacillus sp. strain KSM-K38 (AmyK38, in calcium containing solution)
分子名称: SODIUM ION, amylase
著者Nonaka, T, Fujihashi, M, Kita, A, Hagihara, H, Ozaki, K, Ito, S, Miki, K.
登録日2003-04-28
公開日2003-07-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites
J.Biol.Chem., 278, 2003
1UD2
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BU of 1ud2 by Molmil
Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38)
分子名称: GLYCEROL, SODIUM ION, amylase
著者Nonaka, T, Fujihashi, M, Kita, A, Hagihara, H, Ozaki, K, Ito, S, Miki, K.
登録日2003-04-28
公開日2003-07-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites
J.Biol.Chem., 278, 2003
1VAT
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BU of 1vat by Molmil
Iodine derivative of hen egg-white lysozyme
分子名称: IODIDE ION, Lysozyme C
著者Takeda, K, Miyatake, H, Park, S.Y, Kawamoto, M, Kamiya, N, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-02-19
公開日2005-03-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Multi-wavelength anomalous diffraction method for I and Xe atoms using ultra-high-energy X-rays from SPring-8
J.Appl.Crystallogr., 37, 2004
1VAU
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BU of 1vau by Molmil
Xenon derivative of hen egg-white lysozyme
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
著者Takeda, K, Miyatake, H, Park, S.Y, Kawamoto, M, Kamiya, N, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-02-19
公開日2005-03-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Multi-wavelength anomalous diffraction method for I and Xe atoms using ultra-high-energy X-rays from SPring-8
J.Appl.Crystallogr., 37, 2004
1IQU
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BU of 1iqu by Molmil
Crystal structure of photolyase-thymine complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, THYMINE, ...
著者Komori, H, Masui, R, Kuramitsu, S, Yokoyama, S, Shibata, T, Inoue, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-08-03
公開日2002-05-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
1IQR
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BU of 1iqr by Molmil
Crystal structure of DNA photolyase from Thermus thermophilus
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, photolyase
著者Komori, H, Masui, R, Kuramitsu, S, Yokoyama, S, Shibata, T, Inoue, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-07-27
公開日2001-11-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
1IT6
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BU of 1it6 by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN CALYCULIN A AND THE CATALYTIC SUBUNIT OF PROTEIN PHOSPHATASE 1
分子名称: CALYCULIN A, MANGANESE (II) ION, SERINE/THREONINE PROTEIN PHOSPHATASE 1 GAMMA (PP1-GAMMA) CATALYTIC SUBUNIT
著者Kita, A, Matsunaga, S, Takai, A, Kataiwa, H, Wakimoto, T, Fusetani, N, Isobe, M, Miki, K.
登録日2002-01-09
公開日2002-05-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the complex between calyculin A and the catalytic subunit of protein phosphatase 1.
Structure, 10, 2002
2YYL
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BU of 2yyl by Molmil
Crystal structure of the mutant of HpaB (T198I, A276G, and R466H) complexed with FAD
分子名称: 4-hydroxyphenylacetate-3-hydroxylase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
著者Kim, S.-H, Hisano, T, Takeda, K, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-04-30
公開日2007-09-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2YYG
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BU of 2yyg by Molmil
Crystal structure of the oxygenase component (HpaB) of 4-hydroxyphenylacetate 3-monooxygenase
分子名称: 4-hydroxyphenylacetate-3-hydroxylase, SULFATE ION
著者Kim, S.-H, Hisano, T, Takeda, K, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-04-30
公開日2007-09-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2YYI
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BU of 2yyi by Molmil
Crystal structure of the oxygenase component (HpaB) of 4-hydroxyphenylacetate 3-monooxygenase complexed with FAD
分子名称: 4-hydroxyphenylacetate-3-hydroxylase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
著者Kim, S.-H, Hisano, T, Takeda, K, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-04-30
公開日2007-09-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2YYJ
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BU of 2yyj by Molmil
Crystal structure of the oxygenase component (HpaB) of 4-hydroxyphenylacetate 3-monooxygenase complexed with FAD and 4-hydroxyphenylacetate
分子名称: 4-HYDROXYPHENYLACETATE, 4-hydroxyphenylacetate-3-hydroxylase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Kim, S.-H, Hisano, T, Takeda, K, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-04-30
公開日2007-09-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2YYM
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BU of 2yym by Molmil
Crystal structure of the mutant of HpaB (T198I, A276G, and R466H) complexed with FAD and 4-hydroxyphenylacetate
分子名称: 4-HYDROXYPHENYLACETATE, 4-hydroxyphenylacetate-3-hydroxylase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Kim, S.-H, Hisano, T, Takeda, K, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-04-30
公開日2007-09-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2YYK
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BU of 2yyk by Molmil
Crystal structure of the mutant of HpaB (T198I, A276G, and R466H)
分子名称: 4-hydroxyphenylacetate-3-hydroxylase, ACETIC ACID, GLYCEROL, ...
著者Kim, S.-H, Hisano, T, Takeda, K, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-04-30
公開日2007-09-04
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
5X0G
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BU of 5x0g by Molmil
Free serine kinase (E30A mutant) in complex with ADP
分子名称: 2-hydroxy-3-[4-(2-hydroxy-3-sulfopropyl)piperazin-1-yl]propane-1-sulfonic acid, ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
著者Nagata, R, Fujihashi, M, Miki, K.
登録日2017-01-20
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis
ACS Chem. Biol., 12, 2017
5X0J
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BU of 5x0j by Molmil
Free serine kinase (E30Q mutant) in complex with phosphoserine and AMP
分子名称: ADENOSINE MONOPHOSPHATE, Free serine kinase, MAGNESIUM ION, ...
著者Nagata, R, Fujihashi, M, Miki, K.
登録日2017-01-20
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis
ACS Chem. Biol., 12, 2017
5X0F
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BU of 5x0f by Molmil
Free serine kinase (E30A mutant) in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, Free serine kinase
著者Nagata, R, Fujihashi, M, Miki, K.
登録日2017-01-20
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis
ACS Chem. Biol., 12, 2017
5X0K
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BU of 5x0k by Molmil
Free serine kinase (E30Q mutant) in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, Free serine kinase
著者Nagata, R, Fujihashi, M, Miki, K.
登録日2017-01-20
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis
ACS Chem. Biol., 12, 2017
5X0B
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BU of 5x0b by Molmil
Free serine kinase in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, Free serine kinase
著者Nagata, R, Fujihashi, M, Miki, K.
登録日2017-01-20
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis
ACS Chem. Biol., 12, 2017
5X0E
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BU of 5x0e by Molmil
Free serine kinase (E30A mutant) in complex with phosphoserine and AMP
分子名称: ADENOSINE MONOPHOSPHATE, Free serine kinase, MAGNESIUM ION, ...
著者Nagata, R, Fujihashi, M, Miki, K.
登録日2017-01-20
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis
ACS Chem. Biol., 12, 2017
5X4A
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BU of 5x4a by Molmil
SLL-2-Forssman antigen tetrasaccharides complex
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Galactose-binding lectin, ...
著者Kita, A, Miki, K.
登録日2017-02-11
公開日2017-09-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structure of octocoral lectin SLL-2 complexed with Forssman antigen tetrasaccharide.
Glycobiology, 2017
5XSW
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BU of 5xsw by Molmil
Crystal structure of an archaeal chitinase in the substrate-complex form (P63)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, Chitinase, GLYCEROL, ...
著者Nishitani, Y, Miki, K.
登録日2017-06-15
公開日2018-05-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structures of an archaeal chitinase ChiD and its ligand complexes.
Glycobiology, 28, 2018
5XSV
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BU of 5xsv by Molmil
Crystal structure of an archaeal chitinase in the ligand-free form
分子名称: COBALT (II) ION, Chitinase, SULFATE ION
著者Nishitani, Y, Miki, K.
登録日2017-06-15
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.723 Å)
主引用文献Crystal structures of an archaeal chitinase ChiD and its ligand complexes.
Glycobiology, 28, 2018
5XSX
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Crystal structure of an archaeal chitinase in the substrate-complex form (P212121)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase, GLYCEROL, ...
著者Nishitani, Y, Miki, K.
登録日2017-06-15
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.642 Å)
主引用文献Crystal structures of an archaeal chitinase ChiD and its ligand complexes.
Glycobiology, 28, 2018
5YSQ
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Sulfate-complex structure of a pyrophosphate-dependent kinase in the ribokinase family provides insight into the donor-binding mode
分子名称: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, SULFATE ION, TM0415
著者Nagata, R, Fujihashi, M, Miki, K.
登録日2017-11-14
公開日2018-05-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Identification of a pyrophosphate-dependent kinase and its donor selectivity determinants.
Nat Commun, 9, 2018

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