2IPB
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3MVD
| Crystal structure of the chromatin factor RCC1 in complex with the nucleosome core particle | 分子名称: | DNA (146-MER), Histone H2A, Histone H2B 1.1, ... | 著者 | Makde, R.D, England, J.R, Yennawar, H.P, Tan, S. | 登録日 | 2010-05-04 | 公開日 | 2010-08-25 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Structure of RCC1 chromatin factor bound to the nucleosome core particle. Nature, 467, 2010
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1Z5G
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1Z5U
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1Z88
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2A96
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2AUT
| Crystal structure of Lys154Asn mutant of mature AphA of S. typhimurium | 分子名称: | AphA, MAGNESIUM ION, PHOSPHATE ION, ... | 著者 | Makde, R.D, Gupta, G.D, Kumar, V. | 登録日 | 2005-08-29 | 公開日 | 2006-09-05 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | 主引用文献 | Structural and mutational analyses reveal the functional role of active-site Lys-154 and Asp-173 of Salmonella typhimurium AphA protein. Arch.Biochem.Biophys., 464, 2007
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2AKC
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8JFS
| Phosphate bound acylphosphatase from Deinococcus radiodurans at 1 Angstrom resolution | 分子名称: | 1,2-ETHANEDIOL, Acylphosphatase, CITRIC ACID, ... | 著者 | Khakerwala, Z, Kumar, A, Makde, R.D. | 登録日 | 2023-05-18 | 公開日 | 2023-06-14 | 最終更新日 | 2023-06-28 | 実験手法 | X-RAY DIFFRACTION (1 Å) | 主引用文献 | Crystal structure of phosphate bound Acyl phosphatase mini-enzyme from Deinococcus radiodurans at 1 angstrom resolution. Biochem.Biophys.Res.Commun., 671, 2023
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8WT1
| Crystal structure of S9 carboxypeptidase from Geobacillus sterothermophilus | 分子名称: | ALANINE, CITRATE ANION, GLYCEROL, ... | 著者 | Chandravanshi, K, Kumar, A, Sen, C, Singh, R, Bhange, G.B, Makde, R.D. | 登録日 | 2023-10-17 | 公開日 | 2024-03-13 | 最終更新日 | 2024-04-10 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure and solution scattering of Geobacillus stearothermophilus S9 peptidase reveal structural adaptations for carboxypeptidase activity. Febs Lett., 598, 2024
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7XBJ
| Txp40, an insecticidal toxin protein from Xenorhabdus nematophila | 分子名称: | 40kDa insecticidal toxin | 著者 | Kinkar, O, Kumar, A, Prashar, A, Hire, R.S, Makde, R.D. | 登録日 | 2022-03-21 | 公開日 | 2023-03-29 | 最終更新日 | 2023-12-20 | 実験手法 | X-RAY DIFFRACTION (2.08 Å) | 主引用文献 | The crystal structure of insecticidal protein Txp40 from Xenorhabdus nematophila reveals a two-domain unique binary toxin with homology to the toxin-antitoxin (TA) system. Insect Biochem.Mol.Biol., 164, 2023
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7YH4
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4R60
| Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris | 分子名称: | MANGANESE (II) ION, PHOSPHATE ION, Proline dipeptidase, ... | 著者 | Kumar, A, Ghosh, B, Are, V.N, Jamdar, S.N, Makde, R.D, Sharma, S.M. | 登録日 | 2014-08-22 | 公開日 | 2014-09-17 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.83 Å) | 主引用文献 | Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris to be published
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7CAY
| Crystal Structure of Lon N-terminal domain protein from Xanthomonas campestris | 分子名称: | ATP-dependent protease | 著者 | Singh, R, Sharma, B, Deshmukh, S, Kumar, A, Makde, R.D. | 登録日 | 2020-06-10 | 公開日 | 2020-10-14 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal structure of XCC3289 from Xanthomonas campestris: homology with the N-terminal substrate-binding domain of Lon peptidase. Acta Crystallogr.,Sect.F, 76, 2020
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7C9B
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7CLE
| Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS | 分子名称: | Acid phosphatase, MAGNESIUM ION | 著者 | Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D. | 登録日 | 2020-07-20 | 公開日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (2.342 Å) | 主引用文献 | Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS To Be Published
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7DES
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5GIQ
| Xaa-Pro peptidase from Deinococcus radiodurans, Zinc bound | 分子名称: | PHOSPHATE ION, Proline dipeptidase, ZINC ION | 著者 | Are, V.N, Singh, R, Kumar, A, Ghosh, B, Jamdar, S.N, Makde, R.D. | 登録日 | 2016-06-24 | 公開日 | 2017-06-28 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structures and activities of widely conserved small prokaryotic aminopeptidases-P clarify classification of M24B peptidases. Proteins, 2018
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5GIV
| Crystal structure of M32 carboxypeptidase from Deinococcus radiodurans R1 | 分子名称: | ACETATE ION, Carboxypeptidase 1, ZINC ION | 著者 | Sharma, B, Singh, R, Yadav, P, Ghosh, B, Kumar, A, Jamdar, S.N, Makde, R.D. | 登録日 | 2016-06-25 | 公開日 | 2017-07-12 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Active site gate of M32 carboxypeptidases illuminated by crystal structure and molecular dynamics simulations Biochim. Biophys. Acta, 1865, 2017
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5GIU
| Crystal structure of Xaa-Pro peptidase from Deinococcus radiodurans, metal-free active site | 分子名称: | PHOSPHATE ION, Proline dipeptidase, SODIUM ION | 著者 | Are, V.N, Kumar, A, Singh, R, Ghosh, B, Jamdar, S.N, Makde, R.D. | 登録日 | 2016-06-25 | 公開日 | 2017-06-28 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.61 Å) | 主引用文献 | Xaa-Pro peptidase from Deinococcus radiodurans, metal-free active site To Be Published
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2QRX
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2QVA
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6IGR
| Crystal structure of S9 peptidase (S514A mutant in inactive state) from Deinococcus radiodurans R1 | 分子名称: | Acyl-peptide hydrolase, putative, GLYCEROL | 著者 | Yadav, P, Gaur, N.K, Goyal, V.D, Kumar, A, Makde, R.D. | 登録日 | 2018-09-25 | 公開日 | 2018-11-14 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Carboxypeptidase in prolyl oligopeptidase family: Unique enzyme activation and substrate-screening mechanisms. J.Biol.Chem., 294, 2019
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6IFG
| Crystal structure of M1 zinc metallopeptidase E323A mutant bound to Tyr-ser-ala substrate from Deinococcus radiodurans | 分子名称: | FORMIC ACID, Tripeptides (TYR-SER-ALA), ZINC ION, ... | 著者 | Agrawal, R, Kumar, A, Kumar, A, Makde, R.D. | 登録日 | 2018-09-20 | 公開日 | 2019-09-25 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Two-domain aminopeptidase of M1 family: Structural features for substrate binding and gating in absence of C-terminal domain. J.Struct.Biol., 208, 2019
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6IGP
| Crystal structure of S9 peptidase (inactive state)from Deinococcus radiodurans R1 in P212121 | 分子名称: | Acyl-peptide hydrolase, putative, GLYCEROL | 著者 | Yadav, P, Goyal, V.D, Kumar, A, Makde, R.D. | 登録日 | 2018-09-25 | 公開日 | 2018-11-14 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Carboxypeptidase in prolyl oligopeptidase family: Unique enzyme activation and substrate-screening mechanisms. J.Biol.Chem., 294, 2019
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