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2B8I
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Crystal Structure and Functional Studies Reveal that PAS Factor from Vibrio vulnificus is a Novel Member of the Saposin-Fold Family
分子名称: PAS factor
著者Lee, J.H, Yang, S.T, Rho, S.H, Im, Y.J, Kim, S.Y, Kim, Y.R, Kim, M.K, Kang, G.B, Kim, J.I, Rhee, J.H, Eom, S.H.
登録日2005-10-07
公開日2006-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure and functional studies reveal that PAS factor from Vibrio vulnificus is a novel member of the saposin-fold family
J.Mol.Biol., 355, 2006
3H2V
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Human raver1 RRM1 domain in complex with human vinculin tail domain Vt
分子名称: Raver-1, Vinculin
著者Lee, J.H, Rangarajan, E.S, Yogesha, S.D, Izard, T.
登録日2009-04-14
公開日2009-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Raver1 interactions with vinculin and RNA suggest a feed-forward pathway in directing mRNA to focal adhesions
Structure, 17, 2009
3H2U
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Human raver1 RRM1, RRM2, and RRM3 domains in complex with human vinculin tail domain Vt
分子名称: Raver-1, Vinculin
著者Lee, J.H, Rangarajan, E.S, Yogesha, S.D, Izard, T.
登録日2009-04-14
公開日2009-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Raver1 interactions with vinculin and RNA suggest a feed-forward pathway in directing mRNA to focal adhesions
Structure, 17, 2009
3HGT
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Structural and functional studies of the yeast class II Hda1 HDAC complex
分子名称: HDA1 complex subunit 3
著者Lee, J.H, Maskos, K, Huber, R.
登録日2009-05-14
公開日2009-08-18
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Functional Studies of the Yeast Class II Hda1 Histone Deacetylase Complex.
J.Mol.Biol., 391, 2009
3HGQ
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Structural and functional studies of the yeast class II Hda1 HDAC complex
分子名称: HDA1 complex subunit 3
著者Lee, J.H, Maskos, K, Huber, R.
登録日2009-05-14
公開日2009-08-18
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and Functional Studies of the Yeast Class II Hda1 Histone Deacetylase Complex.
J.Mol.Biol., 391, 2009
5ACO
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BU of 5aco by Molmil
Cryo-EM structure of PGT128 Fab in complex with BG505 SOSIP.664 Env trimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 ENVELOPE GLYCOPROTEIN, ...
著者Lee, J.H, Ward, A.B.
登録日2015-08-17
公開日2015-09-30
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.36 Å)
主引用文献Model Building and Refinement of a Natively Glycosylated HIV-1 Env Protein by High-Resolution Cryoelectron Microscopy.
Structure, 23, 2015
5V8L
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BG505 SOSIP.664 trimer in complex with broadly neutralizing HIV antibodies 3BNC117 and PGT145
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3BNC117 antibody, ...
著者Lee, J.H, Ward, A.B.
登録日2017-03-22
公開日2017-05-03
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献A Broadly Neutralizing Antibody Targets the Dynamic HIV Envelope Trimer Apex via a Long, Rigidified, and Anionic beta-Hairpin Structure.
Immunity, 46, 2017
1PIB
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Solution structure of DNA containing CPD opposited by GA
分子名称: 5'-D(*CP*GP*CP*AP*TP*TP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3'
著者Lee, J.H, Park, C.J, Shin, J.S, Choi, B.S.
登録日2003-05-30
公開日2004-05-18
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献NMR structure of the DNA decamer duplex containing double T*G mismatches of cis-syn cyclobutane pyrimidine dimer: implications for DNA damage recognition by the XPC-hHR23B complex.
Nucleic Acids Res., 32, 2004
5V8M
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BG505 SOSIP.664 trimer in complex with broadly neutralizing HIV antibody 3BNC117
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lee, J.H, Cottrell, C.A, Ward, A.B.
登録日2017-03-22
公開日2017-05-03
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献A Broadly Neutralizing Antibody Targets the Dynamic HIV Envelope Trimer Apex via a Long, Rigidified, and Anionic beta-Hairpin Structure.
Immunity, 46, 2017
1XTB
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Crystal Structure of Rabbit Phosphoglucose Isomerase Complexed with Sorbitol-6-Phosphate
分子名称: D-SORBITOL-6-PHOSPHATE, phosphoglucose isomerase
著者Lee, J.H, Jeffery, C.J.
登録日2004-10-21
公開日2005-03-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of rabbit phosphoglucose isomerase complexed with D-sorbitol-6-phosphate, an analog of the open chain form of D-glucose-6-phosphate.
Protein Sci., 14, 2005
1SNH
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BU of 1snh by Molmil
Solution structure of the DNA Decamer Duplex Containing Double TG Mismatches of Cis-syn Cyclobutane Pyrimidine Dimer
分子名称: 5'-D(*CP*GP*CP*AP*TP*TP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*GP*GP*TP*GP*CP*G)-3'
著者Lee, J.H, Park, C.J, Shin, J.S, Ikegami, T, Akutsu, H, Choi, B.S.
登録日2004-03-11
公開日2004-05-18
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献NMR structure of the DNA decamer duplex containing double T*G mismatches of cis-syn cyclobutane pyrimidine dimer: implications for DNA damage recognition by the XPC-hHR23B complex.
Nucleic Acids Res., 32, 2004
2FB9
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Crystal structure of the Apo form of D-alanine: D-alanine ligase (Ddl) from Thermus caldophilus: a basis for the substrate-induced conformational changes
分子名称: D-alanine:D-alanine ligase
著者Lee, J.H, Na, Y, Eom, S.H.
登録日2005-12-08
公開日2006-08-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the apo form of D-alanine: D-alanine ligase (Ddl) from Thermus caldophilus: A basis for the substrate-induced conformational changes
Proteins, 64, 2006
2FJK
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Crystal structure of Fructose-1,6-Bisphosphate Aldolase in Thermus caldophilus
分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, Fructose-bisphosphate aldolase
著者Lee, J.H, Im, Y.J, Rho, S.-H, Kim, M.-K, Kang, G.B, Eom, S.H.
登録日2006-01-03
公開日2006-08-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Stereoselectivity of fructose-1,6-bisphosphate aldolase in Thermus caldophilus
Biochem.Biophys.Res.Commun., 347, 2006
2IE8
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Crystal structure of Thermus caldophilus phosphoglycerate kinase in the open conformation
分子名称: phosphoglycerate kinase
著者Lee, J.H, Im, Y.J, Eom, S.H.
登録日2006-09-18
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Thermus caldophilus phosphoglycerate kinase in the open conformation
Biochem.Biophys.Res.Commun., 350, 2006
3UYV
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Crystal structure of a glycosylated ice-binding protein (LeIBP) from Arctic yeast
分子名称: Antifreeze protein, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Lee, J.H, Park, A.K, Do, H, Park, K.S, Moh, S.H, Chi, Y.M, Kim, H.J.
登録日2011-12-06
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structural basis for the antifreeze activity of an ice-binding protein from an Arctic yeast.
J.Biol.Chem., 2012
3UYU
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Structural basis for the antifreeze activity of an ice-binding protein (LeIBP) from Arctic yeast
分子名称: Antifreeze protein, GLYCEROL
著者Lee, J.H, Park, A.K, Do, H, Park, K.S, Moh, S.H, Chi, Y.M, Kim, H.J.
登録日2011-12-06
公開日2012-02-15
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural basis for the antifreeze activity of an ice-binding protein from an Arctic yeast.
J.Biol.Chem., 2012
3VF0
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Raver1 in complex with metavinculin L954 deletion mutant
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Ribonucleoprotein PTB-binding 1, ...
著者Lee, J.H, Vonrhein, C, Bricogne, G, Izard, T.
登録日2012-01-09
公開日2012-07-25
最終更新日2012-09-19
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献The Metavinculin Tail Domain Directs Constitutive Interactions with Raver1 and vinculin RNA.
J.Mol.Biol., 422, 2012
4LQ8
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Rickettsia rickettsii cell surface antigen 4 (sca4) head domain (residues 21-360)
分子名称: Sca-family protein
著者Lee, J.H, Vonrhein, C, Bricogne, G, Izard, T.
登録日2013-07-17
公開日2013-08-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the N-terminal domains of the surface cell antigen 4 of Rickettsia.
Protein Sci., 22, 2013
2PYY
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Crystal Structure of the GluR0 ligand-binding core from Nostoc punctiforme in complex with (L)-glutamate
分子名称: GLUTAMIC ACID, Ionotropic glutamate receptor bacterial homologue
著者Lee, J.H, Kang, G.B, Lim, H.-H, Ree, M, Park, C.-S, Eom, S.H.
登録日2007-05-17
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the GluR0 ligand-binding core from Nostoc punctiforme in complex with L-glutamate: structural dissection of the ligand interaction and subunit interface.
J.Mol.Biol., 376, 2008
3QJM
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Structural flexibility of Shank PDZ domain is important for its binding to different ligands
分子名称: Beta-PIX, SH3 and multiple ankyrin repeat domains protein 1
著者Lee, J.H, Park, H, Park, S.J, Kim, H.J, Eom, S.H.
登録日2011-01-30
公開日2011-04-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.311 Å)
主引用文献The structural flexibility of the shank1 PDZ domain is important for its binding to different ligands
Biochem.Biophys.Res.Commun., 407, 2011
3QJN
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Structural flexibility of Shank PDZ domain is important for its binding to different ligands
分子名称: Beta-PIX, SH3 and multiple ankyrin repeat domains protein 1
著者Lee, J.H, Park, H, Park, S.J, Kim, H.J, Eom, S.H.
登録日2011-01-30
公開日2011-04-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献The structural flexibility of the shank1 PDZ domain is important for its binding to different ligands
Biochem.Biophys.Res.Commun., 407, 2011
5AWN
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Crystal structure of Human anti-HIV-1 broadly neutralizing antibody 3BC176 Fab
分子名称: Heavy chain of 3BC176 Fab, Light chain of 3BC176 Fab
著者Lee, J.H, Wilson, I.A, Ward, A.B.
登録日2015-07-06
公開日2015-11-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.887 Å)
主引用文献Antibodies to a conformational epitope on gp41 neutralize HIV-1 by destabilizing the Env spike.
Nat Commun, 6, 2015
5CCK
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Crystal structure of Human anti-HIV-1 broadly neutralizing antibody 3BC315 Fab
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Antibody 3BC315 Fab heavy chain, Antibody 3BC315 Fab light chain
著者Lee, J.H, Ward, A.B, Wilson, I.A.
登録日2015-07-02
公開日2015-10-07
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Antibodies to a conformational epitope on gp41 neutralize HIV-1 by destabilizing the Env spike.
Nat Commun, 6, 2015
5FUU
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Ectodomain of cleaved wild type JR-FL EnvdCT trimer in complex with PGT151 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lee, J.H, Ward, A.B.
登録日2016-01-29
公開日2016-03-09
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-Em Structure of a Native, Fully Glycosylated and Cleaved HIV-1 Envelope Trimer
Science, 351, 2016
5XWB
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Crystal Structure of 5-Enolpyruvulshikimate-3-phosphate Synthase from a Psychrophilic Bacterium, Colwellia psychrerythraea
分子名称: 3-phosphoshikimate 1-carboxyvinyltransferase
著者Lee, J.H, Kim, H.J, Choi, J.M, Kim, D.-W, Seo, Y.-S.
登録日2017-06-29
公開日2017-09-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of 5-enolpyruvylshikimate-3-phosphate synthase from a psychrophilic bacterium, Colwellia psychrerythraea 34H.
Biochem. Biophys. Res. Commun., 492, 2017

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