Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5J8N
DownloadVisualize
BU of 5j8n by Molmil
Exonuclease III homologue Mm3148 from Methanosarcina mazei
分子名称: Exodeoxyribonuclease III, MAGNESIUM ION, TETRAETHYLENE GLYCOL
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2016-04-08
公開日2016-04-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structure of the archael ExoIII homologue Mm3148 at 1.4 Angstrom
To Be Published
4WW4
DownloadVisualize
BU of 4ww4 by Molmil
Double-heterohexameric rings of full-length Rvb1(ADP)/Rvb2(ADP)
分子名称: ADENOSINE-5'-DIPHOSPHATE, RuvB-like 1, RuvB-like 2
著者Lakomek, K, Hopfner, K.-P.
登録日2014-11-10
公開日2015-02-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Structural Basis for Dodecameric Assembly States and Conformational Plasticity of the Full-Length AAA+ ATPases Rvb1Rvb2.
Structure, 23, 2015
3FGW
DownloadVisualize
BU of 3fgw by Molmil
One chain form of the 66.3 kDa protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, IODIDE ION, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2008-12-08
公開日2009-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Initial insight into the function of the lysosomal 66.3 kDa protein from mouse by means of X-ray crystallography
Bmc Struct.Biol., 9, 2009
3FGR
DownloadVisualize
BU of 3fgr by Molmil
Two chain form of the 66.3 kDa protein at 1.8 Angstroem
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2008-12-08
公開日2009-09-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Initial insight into the function of the lysosomal 66.3 kDa protein from mouse by means of X-ray crystallography
Bmc Struct.Biol., 9, 2009
3FGT
DownloadVisualize
BU of 3fgt by Molmil
Two chain form of the 66.3 kDa protein from mouse lacking the linker peptide
分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2008-12-08
公開日2009-09-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Initial insight into the function of the lysosomal 66.3 kDa protein from mouse by means of X-ray crystallography
Bmc Struct.Biol., 9, 2009
3FBX
DownloadVisualize
BU of 3fbx by Molmil
Crystal structure of the lysosomal 66.3 kDa protein from mouse solved by S-SAD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Lakomek, K, Dickmanns, A, Mueller, U, Ficner, R.
登録日2008-11-20
公開日2009-03-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献De novo sulfur SAD phasing of the lysosomal 66.3 kDa protein from mouse
Acta Crystallogr.,Sect.D, 65, 2009
3G2D
DownloadVisualize
BU of 3g2d by Molmil
Complex of Mth0212 and a 4 bp dsDNA with 3'-overhang
分子名称: 5'-D(*CP*CP*TP*GP*UP*GP*CP*GP*AP*T)-3', 5'-D(*CP*GP*CP*G*CP*AP*GP*GP*C)-3', Exodeoxyribonuclease, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-01-31
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G00
DownloadVisualize
BU of 3g00 by Molmil
Mth0212 in complex with a 9bp blunt end dsDNA at 1.7 Angstrom
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5'-D(*CP*GP*TP*AP*TP*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*UP*TP*AP*CP*G)-3', ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-01-27
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G0A
DownloadVisualize
BU of 3g0a by Molmil
Mth0212 with two bound manganese ions
分子名称: Exodeoxyribonuclease, GLYCEROL, MANGANESE (II) ION, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-01-27
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G2C
DownloadVisualize
BU of 3g2c by Molmil
Mth0212 in complex with a short ssDNA (CGTA)
分子名称: 5'-D(P*CP*GP*TP*A)-3', Exodeoxyribonuclease, GLYCEROL, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-01-31
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G4T
DownloadVisualize
BU of 3g4t by Molmil
Mth0212 (WT) in complex with a 7bp dsDNA
分子名称: 5'-D(*CP*G*TP*AP*CP*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*(UPS)P*TP*AP*CP*G)-3', Exodeoxyribonuclease, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-02-04
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G3C
DownloadVisualize
BU of 3g3c by Molmil
Mth0212 (WT) in complex with a 6bp dsDNA containing a single one nucleotide long 3'-overhang
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 5'-D(*CP*GP*TP*AP*(UPS)P*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*CP*TP*AP*CP*G)-3', ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-02-02
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3FZI
DownloadVisualize
BU of 3fzi by Molmil
1.9 Angstrom structure of the thermophilic exonuclease III homologue Mth0212
分子名称: Exodeoxyribonuclease, MAGNESIUM ION
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-01-26
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G38
DownloadVisualize
BU of 3g38 by Molmil
The catalytically inactive mutant Mth0212 (D151N) in complex with an 8 bp dsDNA
分子名称: 5'-D(*CP*CP*TP*GP*UP*GP*CP*GP*AP*T)-3', 5'-D(*CP*GP*CP*GP*CP*AP*GP*GP*C)-3', Exodeoxyribonuclease, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-02-02
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G0R
DownloadVisualize
BU of 3g0r by Molmil
Complex of Mth0212 and an 8bp dsDNA with distorted ends
分子名称: 5'-D(*CP*CP*CP*TP*GP*UP*GP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*CP*GP*CP*AP*GP*GP*GP*CP*G)-3', Exodeoxyribonuclease, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-01-28
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G1K
DownloadVisualize
BU of 3g1k by Molmil
Mth0212 (WT) crystallized in a monoclinic space group
分子名称: Exodeoxyribonuclease, MAGNESIUM ION
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-01-30
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G3Y
DownloadVisualize
BU of 3g3y by Molmil
Mth0212 in complex with ssDNA in space group P32
分子名称: 5'-D(*CP*GP*TP*AP*(UPS)P*TP*AP*CP*G)-3', Exodeoxyribonuclease, GLYCEROL, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-02-03
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3GA6
DownloadVisualize
BU of 3ga6 by Molmil
Mth0212 in complex with two DNA helices
分子名称: 5'-D(*GP*CP*CP*CP*TP*GP*UP*GP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*CP*GP*CP*AP*GP*GP*GP*C)-3', Exodeoxyribonuclease, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-02-16
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G8V
DownloadVisualize
BU of 3g8v by Molmil
The rationally designed catalytically inactive mutant Mth0212(D151N)
分子名称: Exodeoxyribonuclease, GLYCEROL, TETRAETHYLENE GLYCOL
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-02-12
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G91
DownloadVisualize
BU of 3g91 by Molmil
1.2 Angstrom structure of the exonuclease III homologue Mth0212
分子名称: DI(HYDROXYETHYL)ETHER, Exodeoxyribonuclease, GLYCEROL, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-02-12
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
4WVY
DownloadVisualize
BU of 4wvy by Molmil
Double-heterohexameric rings of full-length Rvb1(ATP)/Rvb2(apo)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, RuvB-like 1, RuvB-like 2
著者Hopfner, K.-P, Lakomek, K.
登録日2014-11-08
公開日2015-02-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.64 Å)
主引用文献Structural Basis for Dodecameric Assembly States and Conformational Plasticity of the Full-Length AAA+ ATPases Rvb1Rvb2.
Structure, 23, 2015
4FO0
DownloadVisualize
BU of 4fo0 by Molmil
Human actin-related protein Arp8 in its ATP-bound state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 8, CHLORIDE ION, ...
著者Gerhold, C.B, Lakomek, K, Seifert, F.U, Hopfner, K.-P.
登録日2012-06-20
公開日2012-09-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of Actin-related protein 8 and its contribution to nucleosome binding.
Nucleic Acids Res., 40, 2012
4KR7
DownloadVisualize
BU of 4kr7 by Molmil
Crystal structure of a 4-thiouridine synthetase - RNA complex with bound ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Probable tRNA sulfurtransferase, ...
著者Neumann, P, Ficner, R, Lakomek, K.
登録日2013-05-16
公開日2014-04-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.421 Å)
主引用文献Crystal structure of a 4-thiouridine synthetase-RNA complex reveals specificity of tRNA U8 modification.
Nucleic Acids Res., 42, 2014
4KR9
DownloadVisualize
BU of 4kr9 by Molmil
Crystal structure of a 4-thiouridine synthetase - RNA complex at 3.5 Angstrom resolution
分子名称: Probable tRNA sulfurtransferase, RNA (39-MER)
著者Neumann, P, Ficner, R, Lakomek, K.
登録日2013-05-16
公開日2014-04-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of a 4-thiouridine synthetase-RNA complex reveals specificity of tRNA U8 modification.
Nucleic Acids Res., 42, 2014
4KR6
DownloadVisualize
BU of 4kr6 by Molmil
Crystal structure of a 4-thiouridine synthetase - RNA complex
分子名称: MERCURY (II) ION, Probable tRNA sulfurtransferase, RNA (39-MER)
著者Neumann, P, Ficner, R, Lakomek, K.
登録日2013-05-16
公開日2014-04-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure of a 4-thiouridine synthetase-RNA complex reveals specificity of tRNA U8 modification.
Nucleic Acids Res., 42, 2014

 

12>

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon