Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3AU6
DownloadVisualize
BU of 3au6 by Molmil
DNA polymerase X from Thermus thermophilus HB8 ternary complex with primer/template DNA and ddGTP
分子名称: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*AP*GP*TP*AP*TP*(DDG))-3', 5'-D(*CP*GP*GP*CP*CP*AP*TP*AP*CP*TP*G)-3', ...
著者Nakane, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-01-28
公開日2012-01-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AU2
DownloadVisualize
BU of 3au2 by Molmil
DNA polymerase X from Thermus thermophilus HB8 complexed with Ca-dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Nakane, S, Ishikawa, H, Wakamatsu, T, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-01-28
公開日2012-01-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AUO
DownloadVisualize
BU of 3auo by Molmil
DNA polymerase X from Thermus thermophilus HB8 ternary complex with 1-nt gapped DNA and ddGTP
分子名称: 1-nt gapped DNA, 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase beta family (X family), ...
著者Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-02-11
公開日2012-01-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AYT
DownloadVisualize
BU of 3ayt by Molmil
TTHB071 protein from Thermus thermophilus HB8
分子名称: Putative uncharacterized protein TTHB071, ZINC ION
著者Nakane, S, Wakamatsu, T, Fukui, K, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-05-17
公開日2011-10-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress
J.Biol.Chem., 286, 2011
3AYV
DownloadVisualize
BU of 3ayv by Molmil
TTHB071 protein from Thermus thermophilus HB8 soaking with ZnCl2
分子名称: Putative uncharacterized protein TTHB071, ZINC ION
著者Nakane, S, Wakamatsu, T, Fukui, K, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-05-17
公開日2011-10-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress
J.Biol.Chem., 286, 2011
3B0Y
DownloadVisualize
BU of 3b0y by Molmil
K263D mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-06-17
公開日2012-05-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3B0X
DownloadVisualize
BU of 3b0x by Molmil
K263A mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-06-17
公開日2012-05-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3CM0
DownloadVisualize
BU of 3cm0 by Molmil
Crystal structure of adenylate kinase from Thermus thermophilus HB8
分子名称: Adenylate kinase
著者Nakagawa, N, Kondo, N, Masui, R, Matsuda, Z, Iwamoto, I, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-03-20
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of adenylate kinase from Thermus thermophilus HB8
To be Published
3CPQ
DownloadVisualize
BU of 3cpq by Molmil
Crystal Structure of L30e a ribosomal protein from Methanocaldococcus jannaschii DSM2661 (MJ1044)
分子名称: 50S ribosomal protein L30e
著者Jeyakanthan, J, Sarani, R, Mridula, P, Sekar, K, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-04-01
公開日2009-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of L30e a ribosomal protein from Methanocaldococcus jannaschii DSM2661 (MJ1044)
To be Published
2CVB
DownloadVisualize
BU of 2cvb by Molmil
Crystal structure of a thioredoxin-like protein from Thermus thermophilus HB8
分子名称: probable thiol-disulfide isomerase/thioredoxin
著者Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-01
公開日2005-12-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a thioredoxin-like protein from Thermus thermophilus HB8
To be Published
2CSL
DownloadVisualize
BU of 2csl by Molmil
Crystal structure of TTHA0137 from Thermus Thermophilus HB8
分子名称: protein translation initiation inhibitor
著者Wang, H, Murayama, K, Terada, T, Chen, L, Jin, Z, Chrzas, J, Liu, Z.J, Wang, B.C, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-22
公開日2005-11-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of TTHA0137 from Thermus Thermophilus HB8
To be Published
2CW5
DownloadVisualize
BU of 2cw5 by Molmil
Crystal structure of a conserved hypothetical protein from Thermus thermophilus HB8
分子名称: Bacterial fluorinating enzyme homolog
著者Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-16
公開日2005-12-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of a conserved hypothetical protein from Thermus thermophilus HB8
To be Published
2CV9
DownloadVisualize
BU of 2cv9 by Molmil
Crystal structure of a hypothetical protein from Thermus thermophilus HB8
分子名称: hypothetical protein TTHA0625
著者Kanagawa, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-01
公開日2005-12-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a hypothetical protein from Thermus thermophilus HB8
To be Published
2CWW
DownloadVisualize
BU of 2cww by Molmil
Crystal structure of Thermus thermophilus TTHA1280, a putative SAM-dependent RNA methyltransferase, in complex with S-adenosyl-L-homocysteine
分子名称: ACETIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Pioszak, A.A, Murayama, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-27
公開日2005-10-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of a putative RNA 5-methyluridine methyltransferase, Thermus thermophilus TTHA1280, and its complex with S-adenosyl-L-homocysteine.
Acta Crystallogr.,Sect.F, 61, 2005
2CW4
DownloadVisualize
BU of 2cw4 by Molmil
Crystal structure of TTHA0137 from Thermus Thermophilus HB8
分子名称: translation initiation inhibitor
著者Wang, H, Murayama, K, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-16
公開日2005-12-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of TTHA0137 from Thermus Thermophilus HB8
TO BE PUBLISHED
2CUW
DownloadVisualize
BU of 2cuw by Molmil
Crystal Structure of Thermus thermophilus PurS, one of the subunits of Formylglycinamide Ribonucleotide Amidotransferase in the purine biosynthetic pathway
分子名称: PurS
著者Yanai, H, Kanagawa, M, Sampei, G, Kawai, G, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-30
公開日2005-11-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Thermus thermophilus PurS, One of the Subunits of Formylglycinamide Ribonucleotide Amidotransferase in the Purine Biosynthetic Pathway
To be Published
2CX5
DownloadVisualize
BU of 2cx5 by Molmil
Crystal structure of a putative trans-editing enzyme for prolyl tRNA synthetase
分子名称: A PUTATIVE TRANS-EDITING ENZYME
著者Murayama, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a putative trans-editing enzyme for prolyl tRNA synthetase
To be Published
2CWL
DownloadVisualize
BU of 2cwl by Molmil
Crystal structure of manganese-free form of pseudocatalase from Thermus thermophilus HB8
分子名称: manganese-free pseudocatalase
著者Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-21
公開日2005-12-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and functional analysis of pseudocatalase from Thermus thermophilus HB8
To be Published
2CWC
DownloadVisualize
BU of 2cwc by Molmil
Crystal structure of ADP-ribosylglycohydrolase-related protein from Thermus thermophilus HB8
分子名称: ADP-ribosylglycohydrolase
著者Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-18
公開日2005-12-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of ADP-ribosylglycohydrolase-related protein from Thermus thermophilus HB8
To be Published
2CVE
DownloadVisualize
BU of 2cve by Molmil
Crystal structure of a conserved hypothetical protein TT1547 from thermus thermophilus HB8
分子名称: L(+)-TARTARIC ACID, hypothetical protein TTHA1053
著者Iino, H, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-02
公開日2005-12-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of a conserved hypothetical protein TT1547 from thermus thermophilus HB8
To be Published
2CTZ
DownloadVisualize
BU of 2ctz by Molmil
Crystal structure of o-acetyl homoserine sulfhydrylase from Thermus thermophilus HB8
分子名称: O-acetyl-L-homoserine sulfhydrylase, PYRIDOXAL-5'-PHOSPHATE
著者Imagawa, T, Kousumi, Y, Tsuge, H, Utsunomiya, H, Ebihara, A, Nakagawa, N, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-24
公開日2005-11-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of o-acetyl homoserine sulfhydrylase from Thermus thermophilus HB8
To be Published
2CVL
DownloadVisualize
BU of 2cvl by Molmil
Crystal structure of TTHA0137 from Thermus Thermophilus HB8
分子名称: protein translation initiation inhibitor
著者Wang, H, Murayama, K, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-08
公開日2005-12-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of TTHA0137 from Thermus Thermophilus HB8
TO BE PUBLISHED
2CVK
DownloadVisualize
BU of 2cvk by Molmil
Crystal Structure of Thermus thermophilus Thioredoxin
分子名称: Thioredoxin
著者Yanai, H, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-04
公開日2005-12-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of a Reduced Thioredoxin from Thermus thermophilus HB8
To be Published
2CVJ
DownloadVisualize
BU of 2cvj by Molmil
Crystal Structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, thioredoxin reductase related protein
著者Kashihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-04
公開日2005-12-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8
To be Published
2CYA
DownloadVisualize
BU of 2cya by Molmil
Crystal structure of tyrosyl-tRNA synthetase from Aeropyrum pernix
分子名称: SULFATE ION, Tyrosyl-tRNA synthetase
著者Kuratani, M, Sakai, H, Takahashi, M, Yanagisawa, T, Kobayashi, T, Murayama, K, Chen, L, Liu, Z.J, Wang, B.C, Kuroishi, C, Kuramitsu, S, Terada, T, Bessho, Y, Shirouzu, M, Sekine, S.I, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-06
公開日2005-11-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structures of Tyrosyl-tRNA Synthetases from Archaea
J.Mol.Biol., 355, 2005

220113

件を2024-05-22に公開中

PDB statisticsPDBj update infoContact PDBjnumon