1WMR
 
 | | Crystal Structure of Isopullulanase from Aspergillus niger ATCC 9642 | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Isopullulanase | | 著者 | Mizuno, M, Tonozuka, T, Miyasaka, Y, Akeboshi, H, Kamitori, S, Nishikawa, A, Sakano, Y. | | 登録日 | 2004-07-15 | | 公開日 | 2005-07-19 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
J.Mol.Biol., 376, 2008
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1WZM
 | | Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) mutatnt R469K | | 分子名称: | Alpha-amylase II, CALCIUM ION | | 著者 | Mizuno, M, Ichikawa, K, Tonozuka, T, Ohtaki, A, Shimura, Y, Kamitori, S, Nishikawa, A, Sakano, Y. | | 登録日 | 2005-03-06 | | 公開日 | 2005-03-22 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | | 主引用文献 | Mutagenesis and Structural Analysis of Thermoactinomyces vulgaris R-47 alpha-Amylase II (TVA II)
To be Published
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1X0C
 | | Improved Crystal Structure of Isopullulanase from Aspergillus niger ATCC 9642 | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Isopullulanase | | 著者 | Mizuno, M, Tonozuka, T, Yamamura, A, Miyasaka, Y, Akeboshi, H, Kamitori, S, Nishikawa, A, Sakano, Y. | | 登録日 | 2005-03-17 | | 公開日 | 2006-06-13 | | 最終更新日 | 2020-07-29 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
J.Mol.Biol., 376, 2008
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2D0H
 | | Crystal Structure of Thermoactinomyces vulgaris R-47 Alpha-Amylase 1 (TVAI) Mutant D356N/E396Q complexed with P2, a pullulan model oligosaccharide | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ... | | 著者 | Abe, A, Yoshida, H, Tonozuka, T, Sakano, Y, Kamitori, S. | | 登録日 | 2005-08-02 | | 公開日 | 2006-07-11 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Complexes of Thermoactinomyces vulgaris R-47 alpha-amylase 1 and pullulan model oligossacharides provide new insight into the mechanism for recognizing substrates with alpha-(1,6) glycosidic linkages
Febs J., 272, 2005
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2D0F
 | | Crystal Structure of Thermoactinomyces vulgaris R-47 Alpha-Amylase 1 (TVAI) Mutant D356N complexed with P2, a pullulan model oligosaccharide | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ... | | 著者 | Abe, A, Yoshida, H, Tonozuka, T, Sakano, Y, Kamitori, S. | | 登録日 | 2005-08-02 | | 公開日 | 2006-07-11 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.08 Å) | | 主引用文献 | Complexes of Thermoactinomyces vulgaris R-47 alpha-amylase 1 and pullulan model oligossacharides provide new insight into the mechanism for recognizing substrates with alpha-(1,6) glycosidic linkages
Febs J., 272, 2005
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2D0G
 | | Crystal Structure of Thermoactinomyces vulgaris R-47 Alpha-Amylase 1 (TVAI) Mutant D356N/E396Q complexed with P5, a pullulan model oligosaccharide | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, alpha-D-glucopyranose, ... | | 著者 | Abe, A, Yoshida, H, Tonozuka, T, Sakano, Y, Kamitori, S. | | 登録日 | 2005-08-02 | | 公開日 | 2006-07-11 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | | 主引用文献 | Complexes of Thermoactinomyces vulgaris R-47 alpha-amylase 1 and pullulan model oligossacharides provide new insight into the mechanism for recognizing substrates with alpha-(1,6) glycosidic linkages
Febs J., 272, 2005
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2D2O
 | | Structure of a complex of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with maltohexaose demonstrates the important role of aromatic residues at the reducing end of the substrate binding cleft | | 分子名称: | CALCIUM ION, Neopullulanase 2, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | | 著者 | Ohtaki, A, Mizuno, M, Yoshida, H, Tonozuka, T, Sakano, Y, Kamitori, S. | | 登録日 | 2005-09-13 | | 公開日 | 2006-08-29 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Structure of a complex of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with maltohexaose demonstrates the important role of aromatic residues at the reducing end of the substrate binding cleft
Carbohydr.Res., 341, 2006
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2HCV
 | | Crystal structure of L-rhamnose isomerase from Pseudomonas stutzeri with metal ion | | 分子名称: | L-rhamnose isomerase, ZINC ION | | 著者 | Yoshida, H, Yamada, M, Takada, G, Izumori, K, Kamitori, S. | | 登録日 | 2006-06-19 | | 公開日 | 2006-12-19 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | The Structures of l-Rhamnose Isomerase from Pseudomonas stutzeri in Complexes with l-Rhamnose and d-Allose Provide Insights into Broad Substrate Specificity
J.Mol.Biol., 365, 2007
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3W7T
 | | Escherichia coli K12 YgjK complexed with mannose | | 分子名称: | CALCIUM ION, MAGNESIUM ION, Uncharacterized protein YgjK, ... | | 著者 | Miyazaki, T, Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T. | | 登録日 | 2013-03-06 | | 公開日 | 2013-04-03 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63.
J.Mol.Biol., 381, 2008
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3W7S
 | | Escherichia coli K12 YgjK complexed with glucose | | 分子名称: | CALCIUM ION, Uncharacterized protein YgjK, alpha-D-glucopyranose | | 著者 | Miyazaki, T, Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T. | | 登録日 | 2013-03-06 | | 公開日 | 2013-04-03 | | 最終更新日 | 2020-07-29 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63.
J.Mol.Biol., 381, 2008
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3WUC
 | | X-ray crystal structure of Xenopus laevis galectin-Va | | 分子名称: | Galectin, MALONIC ACID, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose | | 著者 | Nonaka, Y, Yoshida, H, Kamitori, S, Nakamura, T. | | 登録日 | 2014-04-23 | | 公開日 | 2015-04-08 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Crystal structure of a Xenopus laevis skin proto-type galectin, close to but distinct from galectin-1.
Glycobiology, 25, 2015
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3WW3
 | | X-ray structures of Cellulomonas parahominis L-ribose isomerase with no ligand | | 分子名称: | L-ribose isomerase, MANGANESE (II) ION | | 著者 | Terami, Y, Yoshida, H, Takata, G, Kamitori, S. | | 登録日 | 2014-06-13 | | 公開日 | 2015-04-29 | | 最終更新日 | 2022-08-24 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Essentiality of tetramer formation of Cellulomonas parahominis L-ribose isomerase involved in novel L-ribose metabolic pathway.
Appl.Microbiol.Biotechnol., 99, 2015
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2Z8G
 | | Aspergillus niger ATCC9642 isopullulanase complexed with isopanose | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Isopullulanase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-6)-beta-D-glucopyranose | | 著者 | Mizuno, M, Koide, A, Yamamura, A, Akeboshi, H, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T. | | 登録日 | 2007-09-05 | | 公開日 | 2007-12-18 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
J.Mol.Biol., 376, 2008
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2ZKN
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3WUD
 | | X-ray crystal structure of Xenopus laevis galectin-Ib | | 分子名称: | Galectin, SULFATE ION, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose | | 著者 | Nonaka, Y, Yoshida, H, Kamitori, S, Nakamura, T. | | 登録日 | 2014-04-23 | | 公開日 | 2015-04-08 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.68 Å) | | 主引用文献 | Crystal structure of a Xenopus laevis skin proto-type galectin, close to but distinct from galectin-1.
Glycobiology, 25, 2015
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3WV6
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3WW1
 | | X-ray structure of Cellulomonas parahominis L-ribose isomerase with L-ribose | | 分子名称: | L-ribose, L-ribose isomerase, MANGANESE (II) ION, ... | | 著者 | Terami, Y, Yoshida, H, Takata, G, Kamitori, S. | | 登録日 | 2014-06-13 | | 公開日 | 2015-04-29 | | 最終更新日 | 2022-08-24 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Essentiality of tetramer formation of Cellulomonas parahominis L-ribose isomerase involved in novel L-ribose metabolic pathway.
Appl.Microbiol.Biotechnol., 99, 2015
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3W7U
 | | Escherichia coli K12 YgjK complexed with galactose | | 分子名称: | CALCIUM ION, Uncharacterized protein YgjK, alpha-D-galactopyranose | | 著者 | Miyazaki, T, Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T. | | 登録日 | 2013-03-06 | | 公開日 | 2013-04-03 | | 最終更新日 | 2020-07-29 | | 実験手法 | X-RAY DIFFRACTION (1.99 Å) | | 主引用文献 | Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63.
J.Mol.Biol., 381, 2008
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3WW4
 | | X-ray structures of Cellulomonas parahominis L-ribose isomerase with L-allose | | 分子名称: | L-allose, L-ribose isomerase, MANGANESE (II) ION, ... | | 著者 | Terami, Y, Yoshida, H, Takata, G, Kamitori, S. | | 登録日 | 2014-06-13 | | 公開日 | 2015-04-29 | | 最終更新日 | 2022-08-24 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Essentiality of tetramer formation of Cellulomonas parahominis L-ribose isomerase involved in novel L-ribose metabolic pathway.
Appl.Microbiol.Biotechnol., 99, 2015
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2ZYO
 | | Crystal structure of cyclo/maltodextrin-binding protein complexed with maltotetraose | | 分子名称: | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, solute-binding protein | | 著者 | Matsumoto, M, Yamada, M, Kurakata, Y, Yoshida, H, Kamitori, S, Nishikawa, A, Tonozuka, T. | | 登録日 | 2009-01-27 | | 公開日 | 2009-03-31 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | | 主引用文献 | Crystal structures of open and closed forms of cyclo/maltodextrin-binding protein
Febs J., 276, 2009
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3WW2
 | | X-ray structures of Cellulomonas parahominis L-ribose isomerase with L-psicose | | 分子名称: | L-psicose, L-ribose isomerase, MANGANESE (II) ION, ... | | 著者 | Terami, Y, Yoshida, H, Takata, G, Kamitori, S. | | 登録日 | 2014-06-13 | | 公開日 | 2015-04-29 | | 最終更新日 | 2022-08-24 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Essentiality of tetramer formation of Cellulomonas parahominis L-ribose isomerase involved in novel L-ribose metabolic pathway.
Appl.Microbiol.Biotechnol., 99, 2015
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2ZYM
 | | Crystal structure of cyclo/maltodextrin-binding protein complexed with alpha-cyclodextrin | | 分子名称: | Cyclohexakis-(1-4)-(alpha-D-glucopyranose), Solute-binding protein | | 著者 | Matsumoto, M, Yamada, M, Kurakata, Y, Yoshida, H, Kamitori, S, Nishikawa, A, Tonozuka, T. | | 登録日 | 2009-01-27 | | 公開日 | 2009-03-31 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Crystal structures of open and closed forms of cyclo/maltodextrin-binding protein
Febs J., 276, 2009
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2ZYN
 | | Crystal structure of cyclo/maltodextrin-binding protein complexed with beta-cyclodextrin | | 分子名称: | Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Solute-binding protein | | 著者 | Matsumoto, M, Yamada, M, Kurakata, Y, Yoshida, H, Kamitori, S, Nishikawa, A, Tonozuka, T. | | 登録日 | 2009-01-27 | | 公開日 | 2009-03-31 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Crystal structures of open and closed forms of cyclo/maltodextrin-binding protein
Febs J., 276, 2009
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3A6O
 | | Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase 2/acarbose complex | | 分子名称: | ACARBOSE DERIVED PENTASACCHARIDE, CALCIUM ION, Neopullulanase 2 | | 著者 | Ohtaki, A, Mizuno, M, Tonozuka, T, Sakano, Y, Kamitori, S. | | 登録日 | 2009-09-07 | | 公開日 | 2009-09-22 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Complex structures of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with acarbose and cyclodextrins demonstrate the multiple substrate recognition mechanism
J.BIOL.CHEM., 279, 2004
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3A9R
 | | X-ray Structures of Bacillus pallidus D-Arabinose IsomeraseComplex with (4R)-2-METHYLPENTANE-2,4-DIOL | | 分子名称: | (4R)-2-METHYLPENTANE-2,4-DIOL, D-arabinose isomerase, MANGANESE (II) ION | | 著者 | Takeda, K, Yoshida, H, Izumori, K, Kamitori, S. | | 登録日 | 2009-11-05 | | 公開日 | 2010-04-07 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.77 Å) | | 主引用文献 | X-ray structures of Bacillus pallidusd-arabinose isomerase and its complex with l-fucitol.
Biochim.Biophys.Acta, 1804, 2010
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