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1IZ0
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Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH
分子名称: QUINONE OXIDOREDUCTASE, SULFATE ION
著者Shimomura, Y, Kakuta, Y, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-09-17
公開日2003-07-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH: Implication for NADPH and Substrate Recognition
J.Bacteriol., 185, 2003
1IYZ
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Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, QUINONE OXIDOREDUCTASE
著者Shimomura, Y, Kakuta, Y, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-09-17
公開日2003-07-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH: Implication for NADPH and Substrate Recognition
J.Bacteriol., 185, 2003
1IX4
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Crystal Structure of Rat Heme Oxygenase-1 in complex with Heme bound to Carbon Monoxide
分子名称: CARBON MONOXIDE, HEME OXYGENASE-1, PROTOPORPHYRIN IX CONTAINING FE
著者Sugishima, M, Sakamoto, H, Omata, Y, Hayashi, S, Noguchi, M, Fukuyama, K.
登録日2002-06-10
公開日2003-09-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structures of Ferrous and CO-, CN(-)-, and NO-Bound Forms of Rat Heme Oxygenase-1 (HO-1) in Complex with Heme: Structural Implications for Discrimination between CO and O(2) in HO-1.
Biochemistry, 42, 2003
1IX3
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Crystal Structure of Rat Heme Oxygenase-1 in complex with Heme bound to Cyanide
分子名称: CYANIDE ION, HEME OXYGENASE-1, PROTOPORPHYRIN IX CONTAINING FE
著者Sugishima, M, Sakamoto, H, Omata, Y, Hayashi, S, Noguchi, M, Fukuyama, K.
登録日2002-06-10
公開日2003-09-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of Ferrous and CO-, CN(-)-, and NO-Bound Forms of Rat Heme Oxygenase-1 (HO-1) in Complex with Heme: Structural Implications for Discrimination between CO and O(2) in HO-1.
Biochemistry, 42, 2003
1UJ8
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Structures of ORF3 in Two Crystal Forms, a Member of Isc Machinery of E. coli Involved in the Assembly of Iron-Sulfur Clusters
分子名称: Hypothetical protein yfhJ
著者Shimomura, Y, Takahashi, Y, Fukuyama, K.
登録日2003-07-29
公開日2005-02-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of Escherichia coli YfhJ protein, a member of the ISC machinery involved in assembly of iron-sulfur clusters.
Proteins, 60, 2005
1HSS
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0.19 ALPHA-AMYLASE INHIBITOR FROM WHEAT
分子名称: 0.19 ALPHA-AMYLASE INHIBITOR
著者Oda, Y, Fukuyama, K.
登録日1997-07-01
公開日1998-07-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Tertiary and quaternary structures of 0.19 alpha-amylase inhibitor from wheat kernel determined by X-ray analysis at 2.06 A resolution.
Biochemistry, 36, 1997
2E0X
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Crystal Structure of Gamma-glutamyltranspeptidase from Escherichia coli (monoclinic form)
分子名称: CALCIUM ION, Gamma-glutamyltranspeptidase
著者Okada, T, Wada, K, Fukuyama, K.
登録日2006-10-16
公開日2006-11-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of the gamma-glutamyltranspeptidase precursor protein from Escherichia coli. Structural changes upon autocatalytic processing and implications for the maturation mechanism
J.Biol.Chem., 282, 2007
2E0W
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T391A precursor mutant protein of gamma-Glutamyltranspeptidase from Escherichia coli
分子名称: Gamma-glutamyltranspeptidase
著者Okada, T, Wada, K, Fukuyama, K.
登録日2006-10-16
公開日2006-11-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of the gamma-glutamyltranspeptidase precursor protein from Escherichia coli. Structural changes upon autocatalytic processing and implications for the maturation mechanism
J.Biol.Chem., 282, 2007
2E0Y
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Crystal structure of the samarium derivative of mature gamma-glutamyltranspeptidase from Escherichia coli
分子名称: GLYCEROL, Gamma-glutamyltranspeptidase, SAMARIUM (III) ION
著者Okada, T, Wada, K, Fukuyama, K.
登録日2006-10-16
公開日2006-11-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystal structure of the gamma-glutamyltranspeptidase precursor protein from Escherichia coli. Structural changes upon autocatalytic processing and implications for the maturation mechanism
J.Biol.Chem., 282, 2007
1IR6
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Crystal structure of exonuclease RecJ bound to manganese
分子名称: MANGANESE (II) ION, exonuclease RecJ
著者Yamagata, A, Kakuta, Y, Masui, R, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-09-11
公開日2002-05-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of exonuclease RecJ bound to Mn2+ ion suggests how its characteristic motifs are involved in exonuclease activity.
Proc.Natl.Acad.Sci.USA, 99, 2002
1VGI
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Crystal structure of xenon bound rat heme-heme oxygenase-1 complex
分子名称: FORMIC ACID, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Sugishima, M, Sakamoto, H, Noguchi, M, Fukuyama, K.
登録日2004-04-26
公開日2004-08-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献CO-trapping site in heme oxygenase revealed by photolysis of its co-bound heme complex: mechanism of escaping from product inhibition
J.Mol.Biol., 341, 2004
3AV8
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Refined Structure of Plant-type [2Fe-2S] Ferredoxin I from Aphanothece sacrum at 1.46 A Resolution
分子名称: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin-1, SULFATE ION
著者Kameda, H, Hirabayashi, K, Wada, K, Fukuyama, K.
登録日2011-02-28
公開日2012-01-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Mapping of protein-protein interaction sites in the plant-type [2Fe-2S] ferredoxin.
Plos One, 6, 2011
1WOV
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Crystal structure of heme oxygenase-2 from Synechocystis sp. PCC 6803 in complex with heme
分子名称: Heme oxygenase 2, PROTOPORPHYRIN IX CONTAINING FE
著者Sugishima, M, Hagiwara, Y, Zhang, X, Yoshida, T, Migita, C.T, Fukuyama, K.
登録日2004-08-26
公開日2005-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of dimeric heme oxygenase-2 from Synechocystis sp. PCC 6803 in complex with heme.
Biochemistry, 44, 2005
1WOW
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Crystal structure of heme oxygenase-2 from Synechocystis sp. PCC 6803 complexed with heme in ferrous form
分子名称: Heme oxygenase 2, PROTOPORPHYRIN IX CONTAINING FE
著者Sugishima, M, Hagiwara, Y, Zhang, X, Yoshida, T, Migita, C.T, Fukuyama, K.
登録日2004-08-26
公開日2005-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of dimeric heme oxygenase-2 from Synechocystis sp. PCC 6803 in complex with heme.
Biochemistry, 44, 2005
1WE1
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Crystal structure of heme oxygenase-1 from cyanobacterium Synechocystis sp. PCC6803 in complex with heme
分子名称: CHLORIDE ION, Heme oxygenase 1, ISOPROPYL ALCOHOL, ...
著者Sugishima, M, Migita, C.T, Zhang, X, Yoshida, T, Fukuyama, K.
登録日2004-05-21
公開日2004-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of heme oxygenase-1 from cyanobacterium Synechocystis sp. PCC 6803 in complex with heme
Eur.J.Biochem., 271, 2004
1WOX
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Crystal structure of heme oxygenase-2 from Synechocystis sp. PCC 6803 in complex with heme and NO
分子名称: Heme oxygenase 2, NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE
著者Sugishima, M, Hagiwara, Y, Zhang, X, Yoshida, T, Migita, C.T, Fukuyama, K.
登録日2004-08-26
公開日2005-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of dimeric heme oxygenase-2 from Synechocystis sp. PCC 6803 in complex with heme.
Biochemistry, 44, 2005
1J02
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Crystal Structure of Rat Heme Oxygenase-1-Heme Bound to NO
分子名称: HEME OXYGENASE 1, NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE
著者Sugishima, M, Fukuyama, K.
登録日2002-10-28
公開日2003-09-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structures of Ferrous and CO-, CN(-)-, and NO-Bound Forms of Rat Heme Oxygenase-1 (HO-1) in Complex with Heme: Structural Implications for Discrimination between CO and O(2) in HO-1.
Biochemistry, 42, 2003
2Z8I
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Crystal Structure of Escherichia coli Gamma-Glutamyltranspeptidase in Complex with Azaserine
分子名称: Gamma-glutamyltranspeptidase, O-DIAZOACETYL-L-SERINE
著者Wada, K, Irie, M, Fukuyama, K.
登録日2007-09-05
公開日2008-06-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of Escherichia coli gamma-glutamyltranspeptidase in complex with azaserine and acivicin: novel mechanistic implication for inhibition by glutamine antagonists
J.Mol.Biol., 380, 2008
2Z8K
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Crystal Structure of Escherichia coli gamma-Glutamyltranspeptidase in Complex with Acivicin
分子名称: (2S)-AMINO[(5S)-3-CHLORO-4,5-DIHYDROISOXAZOL-5-YL]ACETIC ACID, Gamma-glutamyltranspeptidase
著者Wada, K, Irie, M, Fukuyama, K.
登録日2007-09-05
公開日2008-06-24
最終更新日2012-04-04
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of Escherichia coli gamma-glutamyltranspeptidase in complex with azaserine and acivicin: novel mechanistic implication for inhibition by glutamine antagonists
J.Mol.Biol., 380, 2008
2Z7E
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Crystal structure of Aquifex aeolicus IscU with bound [2Fe-2S] cluster
分子名称: FE2/S2 (INORGANIC) CLUSTER, NifU-like protein, SULFATE ION
著者Shimomura, Y, Wada, K, Takahashi, Y, Fukuyama, K.
登録日2007-08-20
公開日2008-08-19
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The asymmetric trimeric architecture of [2Fe-2S] IscU: implications for its scaffolding during iron-sulfur cluster biosynthesis
J.Mol.Biol., 383, 2008
2Z8J
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Crystal Structure of Escherichia coli gamma-Glutamyltranspeptidase in Complex with Azaserine prepared in the dark
分子名称: Gamma-glutamyltranspeptidase, O-DIAZOACETYL-L-SERINE
著者Wada, K, Irie, M, Fukuyama, K.
登録日2007-09-05
公開日2008-06-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures of Escherichia coli gamma-glutamyltranspeptidase in complex with azaserine and acivicin: novel mechanistic implication for inhibition by glutamine antagonists
J.Mol.Biol., 380, 2008
3AJG
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Crystal structure of PcyA V225D-biliverdin IX alpha complex
分子名称: BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase
著者Wada, K, Hagiwara, Y, Fukuyama, K.
登録日2010-06-05
公開日2011-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献One residue substitution in PcyA leads to unexpected changes in tetrapyrrole substrate binding.
Biochem.Biophys.Res.Commun., 402, 2010
3AJH
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Crystal structure of PcyA V225D-biliverdin XIII alpha complex
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-2-ylidene]methy l]-5-[(Z)-(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Phycocyanobilin:ferredoxin oxidoreductase
著者Wada, K, Hagiwara, Y, Fukuyama, K.
登録日2010-06-05
公開日2011-03-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献One residue substitution in PcyA leads to unexpected changes in tetrapyrrole substrate binding.
Biochem.Biophys.Res.Commun., 402, 2010
3A75
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Crystal structure of glutamate complex of halotolerant γ-glutamyltranspeptidase from Bacillus subtilis
分子名称: GLUTAMIC ACID, Gamma-glutamyltranspeptidase large chain, Gamma-glutamyltranspeptidase small chain
著者Wada, K, Fukuyama, K.
登録日2009-09-14
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of the halotolerant gamma-glutamyltranspeptidase from Bacillus subtilis in complex with glutamate reveals a unique architecture of the solvent-exposed catalytic pocket
Febs J., 277, 2010
2D2A
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Crystal Structure of Escherichia coli SufA Involved in Biosynthesis of Iron-sulfur Clusters
分子名称: SufA protein
著者Wada, K, Hasegawa, Y, Gong, Z, Minami, Y, Fukuyama, K, Takahashi, Y.
登録日2005-09-05
公開日2005-12-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Escherichia coli SufA involved in biosynthesis of iron-sulfur clusters: Implications for a functional dimer
Febs Lett., 579, 2005

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